RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
MRPL54-202ENST00000589174 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
MRPL54-202ENST00000589174 HRCP23327 699 aa16.21■□□□□ 0.19
MRPL54-202ENST00000589174 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.19
MRPL54-202ENST00000589174 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.19
MRPL54-202ENST00000589174 FAM182BQ5T319 152 aa16.21■□□□□ 0.19
MRPL54-202ENST00000589174 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.19
MRPL54-202ENST00000589174 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
MRPL54-202ENST00000589174 NUDT16Q96DE0 195 aaKnown RBP16.2■□□□□ 0.18
MRPL54-202ENST00000589174 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
MRPL54-202ENST00000589174 GPRASP1Q5JY77 1395 aa16.2■□□□□ 0.18
MRPL54-202ENST00000589174 NRKQ7Z2Y5 1582 aa16.2■□□□□ 0.18
MRPL54-202ENST00000589174 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
MRPL54-202ENST00000589174 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
MRPL54-202ENST00000589174 LMO7Q8WWI1 1683 aa16.19■□□□□ 0.18
MRPL54-202ENST00000589174 POLR3AO14802 1390 aaPredicted RBP16.19■□□□□ 0.18
MRPL54-202ENST00000589174 EIF3AQ14152 1382 aaKnown RBP16.18■□□□□ 0.18
MRPL54-202ENST00000589174 KIAA0232Q92628 1395 aa16.18■□□□□ 0.18
MRPL54-202ENST00000589174 RGPD1P0DJD0 1748 aa16.18■□□□□ 0.18
MRPL54-202ENST00000589174 CHRNA2Q15822 529 aa16.17■□□□□ 0.18
MRPL54-202ENST00000589174 NGDNQ8NEJ9 315 aaKnown RBP16.17■□□□□ 0.18
MRPL54-202ENST00000589174 CDK19Q9BWU1 502 aa16.17■□□□□ 0.18
MRPL54-202ENST00000589174 LRP5O75197 1615 aa16.16■□□□□ 0.18
MRPL54-202ENST00000589174 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
MRPL54-202ENST00000589174 NUTM2GQ5VZR2 741 aa16.16■□□□□ 0.18
MRPL54-202ENST00000589174 STAC3Q96MF2 364 aa16.16■□□□□ 0.18
MRPL54-202ENST00000589174 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
MRPL54-202ENST00000589174 ACEP12821 1306 aa16.15■□□□□ 0.18
MRPL54-202ENST00000589174 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.18
MRPL54-202ENST00000589174 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
MRPL54-202ENST00000589174 NBPF8Q3BBV2 869 aa16.13■□□□□ 0.17
MRPL54-202ENST00000589174 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
MRPL54-202ENST00000589174 PLEKHG3A1L390 1219 aa16.12■□□□□ 0.17
MRPL54-202ENST00000589174 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
MRPL54-202ENST00000589174 PSDA5PKW4 1024 aaPredicted RBP16.11■□□□□ 0.17
MRPL54-202ENST00000589174 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
MRPL54-202ENST00000589174 USP19O94966 1318 aa16.11■□□□□ 0.17
MRPL54-202ENST00000589174 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
MRPL54-202ENST00000589174 SSH2Q76I76 1423 aa16.11■□□□□ 0.17
MRPL54-202ENST00000589174 TRPM1Q7Z4N2 1603 aa16.1■□□□□ 0.17
MRPL54-202ENST00000589174 A0A0G2JS52 829 aa16.1■□□□□ 0.17
MRPL54-202ENST00000589174 MYT1Q01538 1121 aa16.1■□□□□ 0.17
MRPL54-202ENST00000589174 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
MRPL54-202ENST00000589174 COL18A1P39060 1754 aa16.1■□□□□ 0.17
MRPL54-202ENST00000589174 PIK3C2AO00443 1686 aa16.09■□□□□ 0.17
MRPL54-202ENST00000589174 RREB1Q92766 1687 aa16.09■□□□□ 0.17
MRPL54-202ENST00000589174 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
MRPL54-202ENST00000589174 STRN4Q9NRL3 753 aa16.08■□□□□ 0.16
MRPL54-202ENST00000589174 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
MRPL54-202ENST00000589174 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
MRPL54-202ENST00000589174 CPDO75976 1380 aa16.07■□□□□ 0.16
MRPL54-202ENST00000589174 NUP188Q5SRE5 1749 aa16.07■□□□□ 0.16
MRPL54-202ENST00000589174 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
MRPL54-202ENST00000589174 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
MRPL54-202ENST00000589174 SLIT3O75094 1523 aa16.06■□□□□ 0.16
MRPL54-202ENST00000589174 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
MRPL54-202ENST00000589174 EZH2Q15910 746 aaKnown RBP16.06■□□□□ 0.16
MRPL54-202ENST00000589174 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
MRPL54-202ENST00000589174 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
MRPL54-202ENST00000589174 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
MRPL54-202ENST00000589174 BAG6P46379 1132 aa16.05■□□□□ 0.16
MRPL54-202ENST00000589174 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
MRPL54-202ENST00000589174 AKAP12Q02952 1782 aa16.05■□□□□ 0.16
MRPL54-202ENST00000589174 USP6P35125 1406 aa16.04■□□□□ 0.16
MRPL54-202ENST00000589174 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
MRPL54-202ENST00000589174 WNK3Q9BYP7 1800 aa16.04■□□□□ 0.16
MRPL54-202ENST00000589174 CAMKK2Q96RR4 588 aa16.04■□□□□ 0.16
MRPL54-202ENST00000589174 SIN3AQ96ST3 1273 aa16.04■□□□□ 0.16
MRPL54-202ENST00000589174 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
MRPL54-202ENST00000589174 TRIM37O94972 964 aa16.03■□□□□ 0.16
MRPL54-202ENST00000589174 ABTB2Q8N961 1025 aa16.03■□□□□ 0.16
MRPL54-202ENST00000589174 LRRC37A3O60309 1634 aa16.03■□□□□ 0.16
MRPL54-202ENST00000589174 GCP02774 474 aa16.02■□□□□ 0.16
MRPL54-202ENST00000589174 BARGINQ6ZT62 677 aa16.02■□□□□ 0.16
MRPL54-202ENST00000589174 SRPK2P78362 688 aaKnown RBP16.01■□□□□ 0.15
MRPL54-202ENST00000589174 R3HDM1Q15032 1099 aaKnown RBP16.01■□□□□ 0.15
MRPL54-202ENST00000589174 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
MRPL54-202ENST00000589174 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
MRPL54-202ENST00000589174 PTF1AQ7RTS3 328 aa15.98■□□□□ 0.15
MRPL54-202ENST00000589174 TCP11L2Q8N4U5 519 aa15.98■□□□□ 0.15
MRPL54-202ENST00000589174 AXIN2Q9Y2T1 843 aa15.98■□□□□ 0.15
MRPL54-202ENST00000589174 NFAT5O94916 1531 aa15.97■□□□□ 0.15
MRPL54-202ENST00000589174 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
MRPL54-202ENST00000589174 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
MRPL54-202ENST00000589174 CRB1P82279 1406 aa15.95■□□□□ 0.14
MRPL54-202ENST00000589174 APBA3O96018 575 aa15.95■□□□□ 0.14
MRPL54-202ENST00000589174 EVA1CP58658 441 aa15.95■□□□□ 0.14
MRPL54-202ENST00000589174 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
MRPL54-202ENST00000589174 AATKQ6ZMQ8 1374 aa15.95■□□□□ 0.14
MRPL54-202ENST00000589174 CPSF1Q10570 1443 aaKnown RBP15.94■□□□□ 0.14
MRPL54-202ENST00000589174 NLRP6P59044 892 aa15.94■□□□□ 0.14
MRPL54-202ENST00000589174 CD163L1Q9NR16 1453 aa15.94■□□□□ 0.14
MRPL54-202ENST00000589174 USP54Q70EL1 1684 aa15.94■□□□□ 0.14
MRPL54-202ENST00000589174 TTC21BQ7Z4L5 1316 aa15.93■□□□□ 0.14
MRPL54-202ENST00000589174 RGPD3A6NKT7 1758 aaPredicted RBP15.92■□□□□ 0.14
MRPL54-202ENST00000589174 RGPD4Q7Z3J3 1758 aa15.92■□□□□ 0.14
MRPL54-202ENST00000589174 THRAP3Q9Y2W1 955 aaKnown RBP15.92■□□□□ 0.14
MRPL54-202ENST00000589174 CASZ1Q86V15 1759 aa15.91■□□□□ 0.14
MRPL54-202ENST00000589174 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
MRPL54-202ENST00000589174 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms