RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 TTC21AQ8NDW8 1320 aa19.02■□□□□ 0.64
NLE1-205ENST00000588642 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.64
NLE1-205ENST00000588642 XPCQ01831 940 aaPredicted RBP19.02■□□□□ 0.64
NLE1-205ENST00000588642 BRINP3Q76B58 766 aa19.02■□□□□ 0.64
NLE1-205ENST00000588642 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
NLE1-205ENST00000588642 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
NLE1-205ENST00000588642 COG3Q96JB2 828 aa19.01■□□□□ 0.63
NLE1-205ENST00000588642 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
NLE1-205ENST00000588642 BRD4O60885 1362 aaPredicted RBP19.01■□□□□ 0.63
NLE1-205ENST00000588642 SSH2Q76I76 1423 aa19■□□□□ 0.63
NLE1-205ENST00000588642 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
NLE1-205ENST00000588642 PPP2R1AP30153 589 aa18.99■□□□□ 0.63
NLE1-205ENST00000588642 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
NLE1-205ENST00000588642 NLRP13Q86W25 1043 aa18.98■□□□□ 0.63
NLE1-205ENST00000588642 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
NLE1-205ENST00000588642 TOM1O60784 492 aa18.97■□□□□ 0.63
NLE1-205ENST00000588642 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
NLE1-205ENST00000588642 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
NLE1-205ENST00000588642 NLRP6P59044 892 aa18.96■□□□□ 0.63
NLE1-205ENST00000588642 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
NLE1-205ENST00000588642 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
NLE1-205ENST00000588642 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
NLE1-205ENST00000588642 MON2Q7Z3U7 1717 aa18.95■□□□□ 0.62
NLE1-205ENST00000588642 CCDC184Q52MB2 194 aa18.95■□□□□ 0.62
NLE1-205ENST00000588642 KIF1AQ12756 1690 aa18.95■□□□□ 0.62
NLE1-205ENST00000588642 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
NLE1-205ENST00000588642 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
NLE1-205ENST00000588642 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
NLE1-205ENST00000588642 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
NLE1-205ENST00000588642 SBNO1A3KN83 1393 aa18.91■□□□□ 0.62
NLE1-205ENST00000588642 NRKQ7Z2Y5 1582 aa18.9■□□□□ 0.62
NLE1-205ENST00000588642 MTHFSP49914 203 aa18.9■□□□□ 0.62
NLE1-205ENST00000588642 SOX12O15370 315 aa18.89■□□□□ 0.61
NLE1-205ENST00000588642 FBLN1P23142 703 aa18.89■□□□□ 0.61
NLE1-205ENST00000588642 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
NLE1-205ENST00000588642 CFAP53Q96M91 514 aa18.88■□□□□ 0.61
NLE1-205ENST00000588642 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
NLE1-205ENST00000588642 OVOS2A0A0J9YW53 1432 aa18.88■□□□□ 0.61
NLE1-205ENST00000588642 OVOS2Q6IE36 1432 aa18.88■□□□□ 0.61
NLE1-205ENST00000588642 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
NLE1-205ENST00000588642 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
NLE1-205ENST00000588642 SPATA31A3Q5VYP0 1347 aa18.87■□□□□ 0.61
NLE1-205ENST00000588642 PXDNQ92626 1479 aa18.87■□□□□ 0.61
NLE1-205ENST00000588642 KIF20BQ96Q89 1820 aa18.86■□□□□ 0.61
NLE1-205ENST00000588642 POLKQ9UBT6 870 aa18.86■□□□□ 0.61
NLE1-205ENST00000588642 AATKQ6ZMQ8 1374 aa18.85■□□□□ 0.61
NLE1-205ENST00000588642 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
NLE1-205ENST00000588642 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
NLE1-205ENST00000588642 TNS3Q68CZ2 1445 aa18.84■□□□□ 0.61
NLE1-205ENST00000588642 KCNH5Q8NCM2 988 aa18.84■□□□□ 0.61
NLE1-205ENST00000588642 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
NLE1-205ENST00000588642 ARHGEF10O15013 1369 aa18.83■□□□□ 0.61
NLE1-205ENST00000588642 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
NLE1-205ENST00000588642 PIK3C2AO00443 1686 aa18.82■□□□□ 0.6
NLE1-205ENST00000588642 GCP02774 474 aa18.82■□□□□ 0.6
NLE1-205ENST00000588642 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
NLE1-205ENST00000588642 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
NLE1-205ENST00000588642 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
NLE1-205ENST00000588642 USP19O94966 1318 aa18.8■□□□□ 0.6
NLE1-205ENST00000588642 ROBO1Q9Y6N7 1651 aa18.8■□□□□ 0.6
NLE1-205ENST00000588642 AMPHP49418 695 aa18.8■□□□□ 0.6
NLE1-205ENST00000588642 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
NLE1-205ENST00000588642 MAP3K19Q56UN5 1328 aa18.79■□□□□ 0.6
NLE1-205ENST00000588642 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
NLE1-205ENST00000588642 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
NLE1-205ENST00000588642 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
NLE1-205ENST00000588642 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
NLE1-205ENST00000588642 HAP1P54257 671 aaPredicted RBP18.77■□□□□ 0.6
NLE1-205ENST00000588642 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
NLE1-205ENST00000588642 NHSL1Q5SYE7 1610 aa18.76■□□□□ 0.59
NLE1-205ENST00000588642 AHDC1Q5TGY3 1603 aaPredicted RBP18.75■□□□□ 0.59
NLE1-205ENST00000588642 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
NLE1-205ENST00000588642 INSRP06213 1382 aa18.75■□□□□ 0.59
NLE1-205ENST00000588642 PNPLA6Q8IY17 1366 aa18.75■□□□□ 0.59
NLE1-205ENST00000588642 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
NLE1-205ENST00000588642 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
NLE1-205ENST00000588642 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
NLE1-205ENST00000588642 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
NLE1-205ENST00000588642 SMG6Q86US8 1419 aaKnown RBP18.74■□□□□ 0.59
NLE1-205ENST00000588642 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
NLE1-205ENST00000588642 SLIT3O75094 1523 aa18.73■□□□□ 0.59
NLE1-205ENST00000588642 FLT4P35916 1363 aa18.72■□□□□ 0.59
NLE1-205ENST00000588642 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
NLE1-205ENST00000588642 HOXC9P31274 260 aa18.72■□□□□ 0.59
NLE1-205ENST00000588642 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
NLE1-205ENST00000588642 IP6K1Q92551 441 aa18.72■□□□□ 0.59
NLE1-205ENST00000588642 USP54Q70EL1 1684 aa18.72■□□□□ 0.59
NLE1-205ENST00000588642 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
NLE1-205ENST00000588642 KIF24Q5T7B8 1368 aa18.71■□□□□ 0.59
NLE1-205ENST00000588642 MED1Q15648 1581 aaPredicted RBP18.71■□□□□ 0.59
NLE1-205ENST00000588642 NFAT5O94916 1531 aa18.7■□□□□ 0.58
NLE1-205ENST00000588642 IL13P35225 146 aa18.7■□□□□ 0.58
NLE1-205ENST00000588642 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
NLE1-205ENST00000588642 LTV1Q96GA3 475 aaPredicted RBP18.69■□□□□ 0.58
NLE1-205ENST00000588642 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
NLE1-205ENST00000588642 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
NLE1-205ENST00000588642 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
NLE1-205ENST00000588642 PRDM11Q9NQV5 511 aa18.67■□□□□ 0.58
NLE1-205ENST00000588642 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
NLE1-205ENST00000588642 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms