RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 ARHGEF28Q8N1W1 1705 aaKnown RBP34.71■■■■□ 3.15
CAPNS1-204ENST00000587718 KTN1Q86UP2 1357 aaKnown RBP34.7■■■■□ 3.14
CAPNS1-204ENST00000587718 SLIT2O94813 1529 aa34.68■■■■□ 3.14
CAPNS1-204ENST00000587718 CABLES1Q8TDN4 633 aa34.68■■■■□ 3.14
CAPNS1-204ENST00000587718 KIAA1210Q9ULL0 1709 aa34.68■■■■□ 3.14
CAPNS1-204ENST00000587718 SUPT16HQ9Y5B9 1047 aaKnown RBP34.68■■■■□ 3.14
CAPNS1-204ENST00000587718 NBPF1Q3BBV0 1214 aa34.67■■■■□ 3.14
CAPNS1-204ENST00000587718 ARHGEF10O15013 1369 aa34.67■■■■□ 3.14
CAPNS1-204ENST00000587718 UNC5CLQ8IV45 518 aa34.63■■■■□ 3.13
CAPNS1-204ENST00000587718 LMOD2Q6P5Q4 547 aa34.62■■■■□ 3.13
CAPNS1-204ENST00000587718 GJD4Q96KN9 370 aaPredicted RBP34.62■■■■□ 3.13
CAPNS1-204ENST00000587718 TRPM3Q9HCF6 1732 aaPredicted RBP34.61■■■■□ 3.13
CAPNS1-204ENST00000587718 ATP7BP35670 1465 aa34.6■■■■□ 3.13
CAPNS1-204ENST00000587718 NUDT16Q96DE0 195 aaKnown RBP34.6■■■■□ 3.13
CAPNS1-204ENST00000587718 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.59■■■■□ 3.13
CAPNS1-204ENST00000587718 ST20-MTHFSA0A0A6YYL1 179 aa34.58■■■■□ 3.13
CAPNS1-204ENST00000587718 HAP1P54257 671 aaPredicted RBP34.58■■■■□ 3.13
CAPNS1-204ENST00000587718 CDK19Q9BWU1 502 aa34.58■■■■□ 3.13
CAPNS1-204ENST00000587718 NGDNQ8NEJ9 315 aaKnown RBP34.57■■■■□ 3.12
CAPNS1-204ENST00000587718 PLEKHG5O94827 1062 aa34.56■■■■□ 3.12
CAPNS1-204ENST00000587718 ABCA3Q99758 1704 aa34.55■■■■□ 3.12
CAPNS1-204ENST00000587718 ALS2Q96Q42 1657 aa34.54■■■■□ 3.12
CAPNS1-204ENST00000587718 FAM83GA6ND36 823 aa34.52■■■■□ 3.12
CAPNS1-204ENST00000587718 MRS2Q9HD23 443 aa34.52■■■■□ 3.12
CAPNS1-204ENST00000587718 ATAD2Q6PL18 1390 aa34.51■■■■□ 3.12
CAPNS1-204ENST00000587718 GLI3P10071 1580 aa34.51■■■■□ 3.11
CAPNS1-204ENST00000587718 HNRNPUQ00839 825 aaKnown RBP eCLIP34.5■■■■□ 3.11
CAPNS1-204ENST00000587718 CCDC61Q9Y6R9 512 aa34.49■■■■□ 3.11
CAPNS1-204ENST00000587718 VPS72Q15906 364 aa34.49■■■■□ 3.11
CAPNS1-204ENST00000587718 ITSN1Q15811 1721 aa34.48■■■■□ 3.11
CAPNS1-204ENST00000587718 POLR3AO14802 1390 aaPredicted RBP34.47■■■■□ 3.11
CAPNS1-204ENST00000587718 CENPJQ9HC77 1338 aaPredicted RBP34.46■■■■□ 3.11
CAPNS1-204ENST00000587718 PLEKHG3A1L390 1219 aa34.46■■■■□ 3.11
CAPNS1-204ENST00000587718 NEFLP07196 543 aa34.46■■■■□ 3.11
CAPNS1-204ENST00000587718 NWD2Q9ULI1 1742 aa34.45■■■■□ 3.11
CAPNS1-204ENST00000587718 PLCH1Q4KWH8 1693 aa34.45■■■■□ 3.1
CAPNS1-204ENST00000587718 PAK3O75914 559 aaPredicted RBP34.45■■■■□ 3.1
CAPNS1-204ENST00000587718 RALBP1Q15311 655 aa34.44■■■■□ 3.1
CAPNS1-204ENST00000587718 TOPAZ1Q8N9V7 1692 aa34.43■■■■□ 3.1
CAPNS1-204ENST00000587718 ACEP12821 1306 aa34.43■■■■□ 3.1
CAPNS1-204ENST00000587718 ZBED9Q6R2W3 1325 aa34.42■■■■□ 3.1
CAPNS1-204ENST00000587718 ONECUT3O60422 494 aaPredicted RBP34.41■■■■□ 3.1
CAPNS1-204ENST00000587718 CRYBG1Q9Y4K1 1723 aa34.4■■■■□ 3.1
CAPNS1-204ENST00000587718 CCDC184Q52MB2 194 aa34.4■■■■□ 3.1
CAPNS1-204ENST00000587718 TESK2Q96S53 571 aa34.38■■■■□ 3.09
CAPNS1-204ENST00000587718 BTG4Q9NY30 223 aa34.37■■■■□ 3.09
CAPNS1-204ENST00000587718 BRD4O60885 1362 aaPredicted RBP34.36■■■■□ 3.09
CAPNS1-204ENST00000587718 SLC24A1O60721 1099 aa34.35■■■■□ 3.09
CAPNS1-204ENST00000587718 SRPK2P78362 688 aaKnown RBP34.35■■■■□ 3.09
CAPNS1-204ENST00000587718 SEPT12Q8IYM1 358 aa34.35■■■■□ 3.09
CAPNS1-204ENST00000587718 CABP2Q9NPB3 220 aa34.35■■■■□ 3.09
CAPNS1-204ENST00000587718 EP400Q96L91 3159 aa34.34■■■■□ 3.09
CAPNS1-204ENST00000587718 COL14A1Q05707 1796 aaKnown RBP34.34■■■■□ 3.09
CAPNS1-204ENST00000587718 NRAPQ86VF7 1730 aa34.33■■■■□ 3.09
CAPNS1-204ENST00000587718 TMF1P82094 1093 aa34.33■■■■□ 3.09
CAPNS1-204ENST00000587718 CCDC9Q9Y3X0 531 aaKnown RBP34.33■■■■□ 3.09
CAPNS1-204ENST00000587718 POLR3GLQ9BT43 218 aa34.32■■■■□ 3.09
CAPNS1-204ENST00000587718 CCDC125Q86Z20 511 aa34.32■■■■□ 3.08
CAPNS1-204ENST00000587718 PPIP5K1Q6PFW1 1433 aa34.31■■■■□ 3.08
CAPNS1-204ENST00000587718 MYBBP1AQ9BQG0 1328 aaKnown RBP34.31■■■■□ 3.08
CAPNS1-204ENST00000587718 QRICH2Q9H0J4 1663 aa34.3■■■■□ 3.08
CAPNS1-204ENST00000587718 ERICH6BQ5W0A0 696 aa34.3■■■■□ 3.08
CAPNS1-204ENST00000587718 NUTM2GQ5VZR2 741 aa34.29■■■■□ 3.08
CAPNS1-204ENST00000587718 PRDM11Q9NQV5 511 aa34.29■■■■□ 3.08
CAPNS1-204ENST00000587718 FKBP8Q14318 412 aa34.27■■■■□ 3.08
CAPNS1-204ENST00000587718 CDCA8Q53HL2 280 aa34.27■■■■□ 3.08
CAPNS1-204ENST00000587718 FAM9BQ8IZU0 186 aa34.27■■■■□ 3.08
CAPNS1-204ENST00000587718 PARD3Q8TEW0 1356 aa34.27■■■■□ 3.08
CAPNS1-204ENST00000587718 KIAA0232Q92628 1395 aa34.27■■■■□ 3.08
CAPNS1-204ENST00000587718 BRWD3Q6RI45 1802 aa34.26■■■■□ 3.07
CAPNS1-204ENST00000587718 ABTB2Q8N961 1025 aa34.25■■■■□ 3.07
CAPNS1-204ENST00000587718 CABP1Q9NZU7 370 aa34.24■■■■□ 3.07
CAPNS1-204ENST00000587718 PHRF1Q9P1Y6 1649 aaKnown RBP34.24■■■■□ 3.07
CAPNS1-204ENST00000587718 INSRP06213 1382 aa34.24■■■■□ 3.07
CAPNS1-204ENST00000587718 SPATA31A5Q5VU36 1347 aa34.24■■■■□ 3.07
CAPNS1-204ENST00000587718 SPATA31A7Q8IWB4 1347 aa34.24■■■■□ 3.07
CAPNS1-204ENST00000587718 USP19O94966 1318 aa34.22■■■■□ 3.07
CAPNS1-204ENST00000587718 EVC2Q86UK5 1308 aa34.22■■■■□ 3.07
CAPNS1-204ENST00000587718 FAM98CQ17RN3 349 aaKnown RBP34.22■■■■□ 3.07
CAPNS1-204ENST00000587718 PER1O15534 1290 aaPredicted RBP34.21■■■■□ 3.07
CAPNS1-204ENST00000587718 ZC3H6P61129 1189 aaKnown RBP34.21■■■■□ 3.07
CAPNS1-204ENST00000587718 CHRNA2Q15822 529 aa34.21■■■■□ 3.07
CAPNS1-204ENST00000587718 KRT27Q7Z3Y8 459 aa34.21■■■■□ 3.07
CAPNS1-204ENST00000587718 PNISRQ8TF01 805 aaKnown RBP34.2■■■■□ 3.07
CAPNS1-204ENST00000587718 BLMP54132 1417 aaPredicted RBP34.19■■■■□ 3.06
CAPNS1-204ENST00000587718 USP6P35125 1406 aa34.17■■■■□ 3.06
CAPNS1-204ENST00000587718 TMC1Q8TDI8 760 aa34.17■■■■□ 3.06
CAPNS1-204ENST00000587718 NLRP13Q86W25 1043 aa34.16■■■■□ 3.06
CAPNS1-204ENST00000587718 NRKQ7Z2Y5 1582 aa34.16■■■■□ 3.06
CAPNS1-204ENST00000587718 CPDO75976 1380 aa34.15■■■■□ 3.06
CAPNS1-204ENST00000587718 SSH2Q76I76 1423 aa34.15■■■■□ 3.06
CAPNS1-204ENST00000587718 GCP02774 474 aa34.13■■■■□ 3.05
CAPNS1-204ENST00000587718 SPATA31A1Q5TZJ5 1347 aa34.13■■■■□ 3.05
CAPNS1-204ENST00000587718 SMG6Q86US8 1419 aaKnown RBP34.12■■■■□ 3.05
CAPNS1-204ENST00000587718 A0A0G2JS52 829 aa34.11■■■■□ 3.05
CAPNS1-204ENST00000587718 MYT1Q01538 1121 aa34.11■■■■□ 3.05
CAPNS1-204ENST00000587718 STRN4Q9NRL3 753 aa34.1■■■■□ 3.05
CAPNS1-204ENST00000587718 CAMTA1Q9Y6Y1 1673 aa34.09■■■■□ 3.05
CAPNS1-204ENST00000587718 SBNO2Q9Y2G9 1366 aa34.09■■■■□ 3.05
CAPNS1-204ENST00000587718 THSD7AQ9UPZ6 1657 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms