RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
DNMT1-212ENST00000587197 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
DNMT1-212ENST00000587197 PLEKHG3A1L390 1219 aa24.2■■□□□ 1.46
DNMT1-212ENST00000587197 PAK3O75914 559 aaPredicted RBP24.2■■□□□ 1.46
DNMT1-212ENST00000587197 PLEKHG5O94827 1062 aa24.2■■□□□ 1.46
DNMT1-212ENST00000587197 CABLES1Q8TDN4 633 aa24.2■■□□□ 1.46
DNMT1-212ENST00000587197 HSPA5P11021 654 aaKnown RBP24.19■■□□□ 1.46
DNMT1-212ENST00000587197 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
DNMT1-212ENST00000587197 TMF1P82094 1093 aa24.19■■□□□ 1.46
DNMT1-212ENST00000587197 ATRNO75882 1429 aa24.18■■□□□ 1.46
DNMT1-212ENST00000587197 BCL9LQ86UU0 1499 aa24.18■■□□□ 1.46
DNMT1-212ENST00000587197 TRPM3Q9HCF6 1732 aaPredicted RBP24.18■■□□□ 1.46
DNMT1-212ENST00000587197 UNC5CLQ8IV45 518 aa24.17■■□□□ 1.46
DNMT1-212ENST00000587197 RGS12O14924 1447 aa24.16■■□□□ 1.46
DNMT1-212ENST00000587197 CDCA8Q53HL2 280 aa24.15■■□□□ 1.46
DNMT1-212ENST00000587197 POLR3AO14802 1390 aaPredicted RBP24.15■■□□□ 1.46
DNMT1-212ENST00000587197 SLIT2O94813 1529 aa24.15■■□□□ 1.46
DNMT1-212ENST00000587197 ACEP12821 1306 aa24.14■■□□□ 1.46
DNMT1-212ENST00000587197 ALS2Q96Q42 1657 aa24.14■■□□□ 1.45
DNMT1-212ENST00000587197 PPIP5K1Q6PFW1 1433 aa24.13■■□□□ 1.45
DNMT1-212ENST00000587197 GJD4Q96KN9 370 aaPredicted RBP24.13■■□□□ 1.45
DNMT1-212ENST00000587197 TOPAZ1Q8N9V7 1692 aa24.12■■□□□ 1.45
DNMT1-212ENST00000587197 UPF1Q92900 1129 aaKnown RBP eCLIP24.12■■□□□ 1.45
DNMT1-212ENST00000587197 CABP1Q9NZU7 370 aa24.12■■□□□ 1.45
DNMT1-212ENST00000587197 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.12■■□□□ 1.45
DNMT1-212ENST00000587197 ABCA3Q99758 1704 aa24.11■■□□□ 1.45
DNMT1-212ENST00000587197 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
DNMT1-212ENST00000587197 FAM83GA6ND36 823 aa24.08■■□□□ 1.45
DNMT1-212ENST00000587197 NWD2Q9ULI1 1742 aa24.07■■□□□ 1.44
DNMT1-212ENST00000587197 BRD4O60885 1362 aaPredicted RBP24.06■■□□□ 1.44
DNMT1-212ENST00000587197 VPS72Q15906 364 aa24.06■■□□□ 1.44
DNMT1-212ENST00000587197 ZNF692Q9BU19 519 aaPredicted RBP24.06■■□□□ 1.44
DNMT1-212ENST00000587197 CCDC9Q9Y3X0 531 aaKnown RBP24.06■■□□□ 1.44
DNMT1-212ENST00000587197 ABTB2Q8N961 1025 aa24.05■■□□□ 1.44
DNMT1-212ENST00000587197 PLCH1Q4KWH8 1693 aa24.05■■□□□ 1.44
DNMT1-212ENST00000587197 CPSF1Q10570 1443 aaKnown RBP24.03■■□□□ 1.44
DNMT1-212ENST00000587197 SLC12A5Q9H2X9 1139 aa24.03■■□□□ 1.44
DNMT1-212ENST00000587197 PRDM11Q9NQV5 511 aa24.03■■□□□ 1.44
DNMT1-212ENST00000587197 BTG4Q9NY30 223 aa24.03■■□□□ 1.44
DNMT1-212ENST00000587197 COL14A1Q05707 1796 aaKnown RBP24.02■■□□□ 1.44
DNMT1-212ENST00000587197 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
DNMT1-212ENST00000587197 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
DNMT1-212ENST00000587197 NLRP13Q86W25 1043 aa24.01■■□□□ 1.43
DNMT1-212ENST00000587197 TERF2IPQ9NYB0 399 aa24■■□□□ 1.43
DNMT1-212ENST00000587197 USP6P35125 1406 aa24■■□□□ 1.43
DNMT1-212ENST00000587197 CRYBG1Q9Y4K1 1723 aa23.99■■□□□ 1.43
DNMT1-212ENST00000587197 GLI3P10071 1580 aa23.99■■□□□ 1.43
DNMT1-212ENST00000587197 HDGFL2Q7Z4V5 671 aaPredicted RBP23.98■■□□□ 1.43
DNMT1-212ENST00000587197 SSH2Q76I76 1423 aa23.98■■□□□ 1.43
DNMT1-212ENST00000587197 CD163L1Q9NR16 1453 aa23.98■■□□□ 1.43
DNMT1-212ENST00000587197 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
DNMT1-212ENST00000587197 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
DNMT1-212ENST00000587197 ZC3H6P61129 1189 aaKnown RBP23.96■■□□□ 1.43
DNMT1-212ENST00000587197 PHRF1Q9P1Y6 1649 aaKnown RBP23.95■■□□□ 1.43
DNMT1-212ENST00000587197 KTN1Q86UP2 1357 aaKnown RBP23.95■■□□□ 1.42
DNMT1-212ENST00000587197 ANKRD36BQ8N2N9 1353 aa23.95■■□□□ 1.42
DNMT1-212ENST00000587197 A0A1W2PP64 1363 aa23.94■■□□□ 1.42
DNMT1-212ENST00000587197 ONECUT3O60422 494 aaPredicted RBP23.94■■□□□ 1.42
DNMT1-212ENST00000587197 SEPT12Q8IYM1 358 aa23.94■■□□□ 1.42
DNMT1-212ENST00000587197 NRAPQ86VF7 1730 aa23.93■■□□□ 1.42
DNMT1-212ENST00000587197 USP19O94966 1318 aa23.93■■□□□ 1.42
DNMT1-212ENST00000587197 TTC21BQ7Z4L5 1316 aa23.93■■□□□ 1.42
DNMT1-212ENST00000587197 CCDC125Q86Z20 511 aa23.93■■□□□ 1.42
DNMT1-212ENST00000587197 TTC21AQ8NDW8 1320 aa23.92■■□□□ 1.42
DNMT1-212ENST00000587197 A0A0G2JS52 829 aa23.92■■□□□ 1.42
DNMT1-212ENST00000587197 NLRP6P59044 892 aa23.92■■□□□ 1.42
DNMT1-212ENST00000587197 MYT1Q01538 1121 aa23.92■■□□□ 1.42
DNMT1-212ENST00000587197 CHRNA2Q15822 529 aa23.92■■□□□ 1.42
DNMT1-212ENST00000587197 AKAP12Q02952 1782 aa23.91■■□□□ 1.42
DNMT1-212ENST00000587197 KIF7Q2M1P5 1343 aa23.91■■□□□ 1.42
DNMT1-212ENST00000587197 GCP02774 474 aa23.91■■□□□ 1.42
DNMT1-212ENST00000587197 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
DNMT1-212ENST00000587197 EVA1CP58658 441 aa23.9■■□□□ 1.42
DNMT1-212ENST00000587197 CPDO75976 1380 aa23.9■■□□□ 1.42
DNMT1-212ENST00000587197 SPATA31A5Q5VU36 1347 aa23.89■■□□□ 1.42
DNMT1-212ENST00000587197 SPATA31A7Q8IWB4 1347 aa23.89■■□□□ 1.42
DNMT1-212ENST00000587197 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
DNMT1-212ENST00000587197 NRKQ7Z2Y5 1582 aa23.88■■□□□ 1.41
DNMT1-212ENST00000587197 FAM98CQ17RN3 349 aaKnown RBP23.88■■□□□ 1.41
DNMT1-212ENST00000587197 KRT27Q7Z3Y8 459 aa23.87■■□□□ 1.41
DNMT1-212ENST00000587197 STRN4Q9NRL3 753 aa23.87■■□□□ 1.41
DNMT1-212ENST00000587197 MON2Q7Z3U7 1717 aa23.87■■□□□ 1.41
DNMT1-212ENST00000587197 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
DNMT1-212ENST00000587197 MYOM1P52179 1685 aa23.85■■□□□ 1.41
DNMT1-212ENST00000587197 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
DNMT1-212ENST00000587197 USP31Q70CQ4 1352 aa23.83■■□□□ 1.41
DNMT1-212ENST00000587197 BRWD3Q6RI45 1802 aa23.83■■□□□ 1.41
DNMT1-212ENST00000587197 KCNH5Q8NCM2 988 aa23.83■■□□□ 1.41
DNMT1-212ENST00000587197 SPATA31A1Q5TZJ5 1347 aa23.83■■□□□ 1.4
DNMT1-212ENST00000587197 SF3B2Q13435 895 aaKnown RBP23.82■■□□□ 1.4
DNMT1-212ENST00000587197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.82■■□□□ 1.4
DNMT1-212ENST00000587197 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
DNMT1-212ENST00000587197 SLIT3O75094 1523 aa23.81■■□□□ 1.4
DNMT1-212ENST00000587197 ZBTB7CA1YPR0 619 aa23.81■■□□□ 1.4
DNMT1-212ENST00000587197 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
DNMT1-212ENST00000587197 BLMP54132 1417 aaPredicted RBP23.8■■□□□ 1.4
DNMT1-212ENST00000587197 PANK3Q9H999 370 aa23.8■■□□□ 1.4
DNMT1-212ENST00000587197 NME9Q86XW9 330 aa23.79■■□□□ 1.4
DNMT1-212ENST00000587197 CAMTA1Q9Y6Y1 1673 aa23.79■■□□□ 1.4
DNMT1-212ENST00000587197 USP35Q9P2H5 1018 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms