RNA–Protein interactions for RNA: ENST00000586817.5

POLR2E-205, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 2,441 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-205ENST00000586817 TRIM27P14373 513 aa28.91■■■□□ 2.22
POLR2E-205ENST00000586817 SSH1Q8WYL5 1049 aa28.91■■■□□ 2.22
POLR2E-205ENST00000586817 TBC1D32Q96NH3 1257 aa28.91■■■□□ 2.22
POLR2E-205ENST00000586817 POGKQ9P215 609 aa28.9■■■□□ 2.22
POLR2E-205ENST00000586817 NSD2O96028 1365 aa28.89■■■□□ 2.22
POLR2E-205ENST00000586817 AAMPQ13685 434 aa28.89■■■□□ 2.21
POLR2E-205ENST00000586817 ITPRIPQ8IWB1 547 aa28.89■■■□□ 2.21
POLR2E-205ENST00000586817 UPF2Q9HAU5 1272 aaKnown RBP28.89■■■□□ 2.21
POLR2E-205ENST00000586817 ADGRB2O60241 1585 aa28.88■■■□□ 2.21
POLR2E-205ENST00000586817 TBC1D2Q9BYX2 928 aa28.88■■■□□ 2.21
POLR2E-205ENST00000586817 YEATS2Q9ULM3 1422 aa28.87■■■□□ 2.21
POLR2E-205ENST00000586817 FYB1O15117 783 aa28.86■■■□□ 2.21
POLR2E-205ENST00000586817 ABCC11Q96J66 1382 aa28.86■■■□□ 2.21
POLR2E-205ENST00000586817 CFAP74Q9C0B2 1584 aa28.86■■■□□ 2.21
POLR2E-205ENST00000586817 RICTORQ6R327 1708 aa28.85■■■□□ 2.21
POLR2E-205ENST00000586817 FBLN1P23142 703 aa28.85■■■□□ 2.21
POLR2E-205ENST00000586817 PUS7Q96PZ0 661 aaKnown RBP28.85■■■□□ 2.21
POLR2E-205ENST00000586817 NOB1Q9ULX3 412 aaKnown RBP28.85■■■□□ 2.21
POLR2E-205ENST00000586817 PRAM1Q96QH2 718 aa28.85■■■□□ 2.21
POLR2E-205ENST00000586817 ANTXR1Q9H6X2 564 aa28.84■■■□□ 2.21
POLR2E-205ENST00000586817 RIPK4P57078 832 aa28.83■■■□□ 2.21
POLR2E-205ENST00000586817 PIK3C2BO00750 1634 aa28.82■■■□□ 2.2
POLR2E-205ENST00000586817 MFAP1P55081 439 aaKnown RBP28.82■■■□□ 2.2
POLR2E-205ENST00000586817 ATF7IPQ6VMQ6 1270 aa28.8■■■□□ 2.2
POLR2E-205ENST00000586817 TMEM57Q8N5G2 664 aa28.8■■■□□ 2.2
POLR2E-205ENST00000586817 COL3A1P02461 1466 aaPredicted RBP28.8■■■□□ 2.2
POLR2E-205ENST00000586817 NCBP3Q53F19 620 aaKnown RBP28.77■■■□□ 2.2
POLR2E-205ENST00000586817 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.76■■■□□ 2.19
POLR2E-205ENST00000586817 CD163L1Q9NR16 1453 aa28.76■■■□□ 2.19
POLR2E-205ENST00000586817 DIAPH1O60610 1272 aaKnown RBP28.75■■■□□ 2.19
POLR2E-205ENST00000586817 TERF2IPQ9NYB0 399 aa28.75■■■□□ 2.19
POLR2E-205ENST00000586817 DDX19BQ9UMR2 479 aa28.75■■■□□ 2.19
POLR2E-205ENST00000586817 CT47B1P0C2W7 299 aaPredicted RBP28.75■■■□□ 2.19
POLR2E-205ENST00000586817 MLECQ14165 292 aa28.75■■■□□ 2.19
POLR2E-205ENST00000586817 MYO5BQ9ULV0 1848 aa28.75■■■□□ 2.19
POLR2E-205ENST00000586817 CABP1Q9NZU7 370 aa28.74■■■□□ 2.19
POLR2E-205ENST00000586817 PTPRMP28827 1452 aa28.74■■■□□ 2.19
POLR2E-205ENST00000586817 FBXO31Q5XUX0 539 aaPredicted RBP28.74■■■□□ 2.19
POLR2E-205ENST00000586817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.74■■■□□ 2.19
POLR2E-205ENST00000586817 C22orf23Q9BZE7 217 aa28.74■■■□□ 2.19
POLR2E-205ENST00000586817 DIP2CQ9Y2E4 1556 aa28.73■■■□□ 2.19
POLR2E-205ENST00000586817 HDAC1Q13547 482 aaPredicted RBP28.73■■■□□ 2.19
POLR2E-205ENST00000586817 ZMYM3Q14202 1370 aa28.73■■■□□ 2.19
POLR2E-205ENST00000586817 CDK19Q9BWU1 502 aa28.72■■■□□ 2.19
POLR2E-205ENST00000586817 ARXQ96QS3 562 aa28.72■■■□□ 2.19
POLR2E-205ENST00000586817 THUMPD2Q9BTF0 503 aaKnown RBP28.7■■■□□ 2.18
POLR2E-205ENST00000586817 ZBTB40Q9NUA8 1239 aa28.7■■■□□ 2.18
POLR2E-205ENST00000586817 SLC52A1Q9NWF4 448 aa28.7■■■□□ 2.18
POLR2E-205ENST00000586817 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.18
POLR2E-205ENST00000586817 YTHDC2Q9H6S0 1430 aaKnown RBP28.69■■■□□ 2.18
POLR2E-205ENST00000586817 KDM4FA0A1W2PPD8 638 aa28.69■■■□□ 2.18
POLR2E-205ENST00000586817 PRKAR2BP31323 418 aa28.68■■■□□ 2.18
POLR2E-205ENST00000586817 HDGFL2Q7Z4V5 671 aaPredicted RBP28.68■■■□□ 2.18
POLR2E-205ENST00000586817 SMC5Q8IY18 1101 aa28.67■■■□□ 2.18
POLR2E-205ENST00000586817 LNPKQ9C0E8 428 aa28.67■■■□□ 2.18
POLR2E-205ENST00000586817 HMOX1P09601 288 aa28.67■■■□□ 2.18
POLR2E-205ENST00000586817 IL16Q14005 1332 aa28.66■■■□□ 2.18
POLR2E-205ENST00000586817 ARHGAP31Q2M1Z3 1444 aa28.65■■■□□ 2.18
POLR2E-205ENST00000586817 ZFYVE9O95405 1425 aa28.64■■■□□ 2.18
POLR2E-205ENST00000586817 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
POLR2E-205ENST00000586817 PHACTR3Q96KR7 559 aa28.64■■■□□ 2.18
POLR2E-205ENST00000586817 C1orf115Q9H7X2 142 aa28.63■■■□□ 2.17
POLR2E-205ENST00000586817 ELL2O00472 640 aaPredicted RBP28.62■■■□□ 2.17
POLR2E-205ENST00000586817 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
POLR2E-205ENST00000586817 TMEM131LA2VDJ0 1609 aa28.62■■■□□ 2.17
POLR2E-205ENST00000586817 KIF16BQ96L93 1317 aa28.62■■■□□ 2.17
POLR2E-205ENST00000586817 PNPLA6Q8IY17 1366 aa28.61■■■□□ 2.17
POLR2E-205ENST00000586817 GZF1Q9H116 711 aaPredicted RBP28.61■■■□□ 2.17
POLR2E-205ENST00000586817 POLKQ9UBT6 870 aa28.61■■■□□ 2.17
POLR2E-205ENST00000586817 LRRC7Q96NW7 1537 aa28.61■■■□□ 2.17
POLR2E-205ENST00000586817 RSPH6AQ9H0K4 717 aa28.61■■■□□ 2.17
POLR2E-205ENST00000586817 IPO8O15397 1037 aaKnown RBP28.6■■■□□ 2.17
POLR2E-205ENST00000586817 STAG3Q9UJ98 1225 aa28.6■■■□□ 2.17
POLR2E-205ENST00000586817 TSPYL6Q8N831 410 aa28.6■■■□□ 2.17
POLR2E-205ENST00000586817 ARHGEF40Q8TER5 1519 aa28.59■■■□□ 2.17
POLR2E-205ENST00000586817 ANKRD26Q9UPS8 1709 aa28.59■■■□□ 2.17
POLR2E-205ENST00000586817 FCHSD2O94868 740 aa28.58■■■□□ 2.17
POLR2E-205ENST00000586817 NUCB1Q02818 461 aa28.58■■■□□ 2.17
POLR2E-205ENST00000586817 MED14O60244 1454 aa28.57■■■□□ 2.16
POLR2E-205ENST00000586817 EMILIN1Q9Y6C2 1016 aa28.57■■■□□ 2.16
POLR2E-205ENST00000586817 PREX1Q8TCU6 1659 aa28.57■■■□□ 2.16
POLR2E-205ENST00000586817 MCM4P33991 863 aa28.56■■■□□ 2.16
POLR2E-205ENST00000586817 ZRANB1Q9UGI0 708 aa28.56■■■□□ 2.16
POLR2E-205ENST00000586817 ALDH1L2Q3SY69 923 aa28.55■■■□□ 2.16
POLR2E-205ENST00000586817 CHD1LQ86WJ1 897 aa28.55■■■□□ 2.16
POLR2E-205ENST00000586817 PNNQ9H307 717 aaKnown RBP28.55■■■□□ 2.16
POLR2E-205ENST00000586817 ALKQ9UM73 1620 aa28.55■■■□□ 2.16
POLR2E-205ENST00000586817 CLTCQ00610 1675 aaKnown RBP28.53■■■□□ 2.16
POLR2E-205ENST00000586817 ANKRD45Q5TZF3 282 aa28.53■■■□□ 2.16
POLR2E-205ENST00000586817 FAM135BQ49AJ0 1406 aa28.53■■■□□ 2.16
POLR2E-205ENST00000586817 VAMP4O75379 141 aa28.52■■■□□ 2.16
POLR2E-205ENST00000586817 HSCBQ8IWL3 235 aa28.52■■■□□ 2.16
POLR2E-205ENST00000586817 CHMP5Q9NZZ3 219 aa28.52■■■□□ 2.16
POLR2E-205ENST00000586817 ZBTB7BO15156 539 aaPredicted RBP28.51■■■□□ 2.15
POLR2E-205ENST00000586817 NFE2L2Q16236 605 aa28.5■■■□□ 2.15
POLR2E-205ENST00000586817 NME9Q86XW9 330 aa28.5■■■□□ 2.15
POLR2E-205ENST00000586817 MRPL50Q8N5N7 158 aaKnown RBP28.5■■■□□ 2.15
POLR2E-205ENST00000586817 KIF20BQ96Q89 1820 aa28.5■■■□□ 2.15
POLR2E-205ENST00000586817 PPIP5K1Q6PFW1 1433 aa28.5■■■□□ 2.15
POLR2E-205ENST00000586817 NCKAP5LQ9HCH0 1330 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms