RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 NBPF8Q3BBV2 869 aa29.36■■■□□ 2.29
CIRBP-209ENST00000586555 NUDT16Q96DE0 195 aaKnown RBP29.36■■■□□ 2.29
CIRBP-209ENST00000586555 ATP7BP35670 1465 aa29.36■■■□□ 2.29
CIRBP-209ENST00000586555 ONECUT3O60422 494 aaPredicted RBP29.34■■■□□ 2.29
CIRBP-209ENST00000586555 NGDNQ8NEJ9 315 aaKnown RBP29.34■■■□□ 2.29
CIRBP-209ENST00000586555 ITSN1Q15811 1721 aa29.34■■■□□ 2.29
CIRBP-209ENST00000586555 CCDC125Q86Z20 511 aa29.33■■■□□ 2.29
CIRBP-209ENST00000586555 CLSPNQ9HAW4 1339 aa29.32■■■□□ 2.28
CIRBP-209ENST00000586555 BRWD3Q6RI45 1802 aa29.31■■■□□ 2.28
CIRBP-209ENST00000586555 SRPK2P78362 688 aaKnown RBP29.31■■■□□ 2.28
CIRBP-209ENST00000586555 CARD11Q9BXL7 1154 aa29.3■■■□□ 2.28
CIRBP-209ENST00000586555 CCDC61Q9Y6R9 512 aa29.3■■■□□ 2.28
CIRBP-209ENST00000586555 CRYBG1Q9Y4K1 1723 aa29.3■■■□□ 2.28
CIRBP-209ENST00000586555 QRICH2Q9H0J4 1663 aa29.3■■■□□ 2.28
CIRBP-209ENST00000586555 SEPT12Q8IYM1 358 aa29.28■■■□□ 2.28
CIRBP-209ENST00000586555 NRAPQ86VF7 1730 aa29.27■■■□□ 2.28
CIRBP-209ENST00000586555 EVC2Q86UK5 1308 aa29.26■■■□□ 2.27
CIRBP-209ENST00000586555 PAK3O75914 559 aaPredicted RBP29.26■■■□□ 2.27
CIRBP-209ENST00000586555 COL14A1Q05707 1796 aaKnown RBP29.26■■■□□ 2.27
CIRBP-209ENST00000586555 POLR3AO14802 1390 aaPredicted RBP29.26■■■□□ 2.27
CIRBP-209ENST00000586555 TOPAZ1Q8N9V7 1692 aa29.25■■■□□ 2.27
CIRBP-209ENST00000586555 PLEKHG3A1L390 1219 aa29.25■■■□□ 2.27
CIRBP-209ENST00000586555 BTG4Q9NY30 223 aa29.25■■■□□ 2.27
CIRBP-209ENST00000586555 TIMELESSQ9UNS1 1208 aa29.25■■■□□ 2.27
CIRBP-209ENST00000586555 CCDC9Q9Y3X0 531 aaKnown RBP29.23■■■□□ 2.27
CIRBP-209ENST00000586555 CABP2Q9NPB3 220 aa29.22■■■□□ 2.27
CIRBP-209ENST00000586555 ACEP12821 1306 aa29.21■■■□□ 2.27
CIRBP-209ENST00000586555 BLMP54132 1417 aaPredicted RBP29.19■■■□□ 2.26
CIRBP-209ENST00000586555 CCER1Q8TC90 406 aaPredicted RBP29.18■■■□□ 2.26
CIRBP-209ENST00000586555 PPIP5K1Q6PFW1 1433 aa29.17■■■□□ 2.26
CIRBP-209ENST00000586555 KRT27Q7Z3Y8 459 aa29.16■■■□□ 2.26
CIRBP-209ENST00000586555 PRDM11Q9NQV5 511 aa29.15■■■□□ 2.26
CIRBP-209ENST00000586555 SPATA31A5Q5VU36 1347 aa29.15■■■□□ 2.26
CIRBP-209ENST00000586555 SPATA31A7Q8IWB4 1347 aa29.15■■■□□ 2.26
CIRBP-209ENST00000586555 PHRF1Q9P1Y6 1649 aaKnown RBP29.14■■■□□ 2.26
CIRBP-209ENST00000586555 SBNO2Q9Y2G9 1366 aa29.13■■■□□ 2.25
CIRBP-209ENST00000586555 FAM98CQ17RN3 349 aaKnown RBP29.13■■■□□ 2.25
CIRBP-209ENST00000586555 KIAA0232Q92628 1395 aa29.13■■■□□ 2.25
CIRBP-209ENST00000586555 CABP1Q9NZU7 370 aa29.12■■■□□ 2.25
CIRBP-209ENST00000586555 ZRANB1Q9UGI0 708 aa29.12■■■□□ 2.25
CIRBP-209ENST00000586555 SLC24A1O60721 1099 aa29.11■■■□□ 2.25
CIRBP-209ENST00000586555 NUTM2GQ5VZR2 741 aa29.1■■■□□ 2.25
CIRBP-209ENST00000586555 SRCAPQ6ZRS2 3230 aa29.09■■■□□ 2.25
CIRBP-209ENST00000586555 ZC3H6P61129 1189 aaKnown RBP29.08■■■□□ 2.25
CIRBP-209ENST00000586555 BRD4O60885 1362 aaPredicted RBP29.08■■■□□ 2.25
CIRBP-209ENST00000586555 CHRNA2Q15822 529 aa29.07■■■□□ 2.24
CIRBP-209ENST00000586555 DEFB132Q7Z7B7 95 aa29.07■■■□□ 2.24
CIRBP-209ENST00000586555 ABTB2Q8N961 1025 aa29.07■■■□□ 2.24
CIRBP-209ENST00000586555 USP19O94966 1318 aa29.06■■■□□ 2.24
CIRBP-209ENST00000586555 SPATA31A1Q5TZJ5 1347 aa29.05■■■□□ 2.24
CIRBP-209ENST00000586555 ZNF692Q9BU19 519 aaPredicted RBP29.05■■■□□ 2.24
CIRBP-209ENST00000586555 THSD7AQ9UPZ6 1657 aa29.05■■■□□ 2.24
CIRBP-209ENST00000586555 A0A0G2JS52 829 aa29.04■■■□□ 2.24
CIRBP-209ENST00000586555 MYT1Q01538 1121 aa29.04■■■□□ 2.24
CIRBP-209ENST00000586555 SF3B2Q13435 895 aaKnown RBP29.04■■■□□ 2.24
CIRBP-209ENST00000586555 NRKQ7Z2Y5 1582 aa29.04■■■□□ 2.24
CIRBP-209ENST00000586555 CPDO75976 1380 aa29.02■■■□□ 2.24
CIRBP-209ENST00000586555 NLRP13Q86W25 1043 aa29.02■■■□□ 2.24
CIRBP-209ENST00000586555 ST20-MTHFSA0A0A6YYL1 179 aa29.01■■■□□ 2.23
CIRBP-209ENST00000586555 STRN4Q9NRL3 753 aa29■■■□□ 2.23
CIRBP-209ENST00000586555 PUS7Q96PZ0 661 aaKnown RBP28.99■■■□□ 2.23
CIRBP-209ENST00000586555 USP6P35125 1406 aa28.99■■■□□ 2.23
CIRBP-209ENST00000586555 CAMTA1Q9Y6Y1 1673 aa28.99■■■□□ 2.23
CIRBP-209ENST00000586555 GCP02774 474 aa28.98■■■□□ 2.23
CIRBP-209ENST00000586555 LMO7Q8WWI1 1683 aa28.98■■■□□ 2.23
CIRBP-209ENST00000586555 SSH2Q76I76 1423 aa28.97■■■□□ 2.23
CIRBP-209ENST00000586555 FAM182BQ5T319 152 aa28.95■■■□□ 2.22
CIRBP-209ENST00000586555 USP47Q96K76 1375 aa28.95■■■□□ 2.22
CIRBP-209ENST00000586555 EVA1CP58658 441 aa28.94■■■□□ 2.22
CIRBP-209ENST00000586555 BARGINQ6ZT62 677 aa28.94■■■□□ 2.22
CIRBP-209ENST00000586555 TMC1Q8TDI8 760 aa28.94■■■□□ 2.22
CIRBP-209ENST00000586555 BAG6P46379 1132 aa28.93■■■□□ 2.22
CIRBP-209ENST00000586555 TESK2Q96S53 571 aa28.93■■■□□ 2.22
CIRBP-209ENST00000586555 RGPD1P0DJD0 1748 aa28.91■■■□□ 2.22
CIRBP-209ENST00000586555 KTN1Q86UP2 1357 aaKnown RBP28.91■■■□□ 2.22
CIRBP-209ENST00000586555 NLRP6P59044 892 aa28.91■■■□□ 2.22
CIRBP-209ENST00000586555 LARP1Q6PKG0 1096 aaKnown RBP28.91■■■□□ 2.22
CIRBP-209ENST00000586555 HDGFL2Q7Z4V5 671 aaPredicted RBP28.91■■■□□ 2.22
CIRBP-209ENST00000586555 TMF1P82094 1093 aa28.9■■■□□ 2.22
CIRBP-209ENST00000586555 CPSF1Q10570 1443 aaKnown RBP28.9■■■□□ 2.22
CIRBP-209ENST00000586555 SLIT3O75094 1523 aa28.89■■■□□ 2.22
CIRBP-209ENST00000586555 AKAP12Q02952 1782 aa28.89■■■□□ 2.22
CIRBP-209ENST00000586555 TERF2IPQ9NYB0 399 aa28.89■■■□□ 2.22
CIRBP-209ENST00000586555 TTC21AQ8NDW8 1320 aa28.89■■■□□ 2.21
CIRBP-209ENST00000586555 USP35Q9P2H5 1018 aa28.88■■■□□ 2.21
CIRBP-209ENST00000586555 TTC21BQ7Z4L5 1316 aa28.88■■■□□ 2.21
CIRBP-209ENST00000586555 PIK3C2AO00443 1686 aa28.87■■■□□ 2.21
CIRBP-209ENST00000586555 TCP11L2Q8N4U5 519 aa28.87■■■□□ 2.21
CIRBP-209ENST00000586555 DISP2A7MBM2 1401 aa28.86■■■□□ 2.21
CIRBP-209ENST00000586555 EN1Q05925 392 aaPredicted RBP28.86■■■□□ 2.21
CIRBP-209ENST00000586555 CDCA8Q53HL2 280 aa28.86■■■□□ 2.21
CIRBP-209ENST00000586555 FAM196AQ6ZSG2 479 aa28.86■■■□□ 2.21
CIRBP-209ENST00000586555 THRAP3Q9Y2W1 955 aaKnown RBP28.86■■■□□ 2.21
CIRBP-209ENST00000586555 NINLQ9Y2I6 1382 aa28.86■■■□□ 2.21
CIRBP-209ENST00000586555 COL5A2P05997 1499 aaPredicted RBP28.85■■■□□ 2.21
CIRBP-209ENST00000586555 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
CIRBP-209ENST00000586555 TNS1Q9HBL0 1735 aaKnown RBP28.85■■■□□ 2.21
CIRBP-209ENST00000586555 AATKQ6ZMQ8 1374 aa28.85■■■□□ 2.21
CIRBP-209ENST00000586555 COL18A1P39060 1754 aa28.83■■■□□ 2.21
CIRBP-209ENST00000586555 KCNH5Q8NCM2 988 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms