RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 RALGAPBQ86X10 1494 aa27.12■■□□□ 1.93
TPM4-204ENST00000586499 EVC2Q86UK5 1308 aa27.11■■□□□ 1.93
TPM4-204ENST00000586499 ATRNO75882 1429 aa27.1■■□□□ 1.93
TPM4-204ENST00000586499 CABP1Q9NZU7 370 aa27.1■■□□□ 1.93
TPM4-204ENST00000586499 CDK12Q9NYV4 1490 aaPredicted RBP27.09■■□□□ 1.93
TPM4-204ENST00000586499 NUTM2GQ5VZR2 741 aa27.09■■□□□ 1.93
TPM4-204ENST00000586499 SLIT2O94813 1529 aa27.09■■□□□ 1.93
TPM4-204ENST00000586499 RGS12O14924 1447 aa27.07■■□□□ 1.92
TPM4-204ENST00000586499 FAM83GA6ND36 823 aa27.07■■□□□ 1.92
TPM4-204ENST00000586499 UNC5CLQ8IV45 518 aa27.07■■□□□ 1.92
TPM4-204ENST00000586499 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
TPM4-204ENST00000586499 GJD4Q96KN9 370 aaPredicted RBP27.02■■□□□ 1.92
TPM4-204ENST00000586499 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
TPM4-204ENST00000586499 TNKS1BP1Q9C0C2 1729 aaKnown RBP27■■□□□ 1.91
TPM4-204ENST00000586499 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
TPM4-204ENST00000586499 SBNO2Q9Y2G9 1366 aa26.98■■□□□ 1.91
TPM4-204ENST00000586499 BTG4Q9NY30 223 aa26.97■■□□□ 1.91
TPM4-204ENST00000586499 USP6P35125 1406 aa26.97■■□□□ 1.91
TPM4-204ENST00000586499 CLSPNQ9HAW4 1339 aa26.96■■□□□ 1.91
TPM4-204ENST00000586499 UPF1Q92900 1129 aaKnown RBP eCLIP26.96■■□□□ 1.91
TPM4-204ENST00000586499 ST20-MTHFSA0A0A6YYL1 179 aa26.95■■□□□ 1.9
TPM4-204ENST00000586499 ZC3H6P61129 1189 aaKnown RBP26.95■■□□□ 1.9
TPM4-204ENST00000586499 PRDM11Q9NQV5 511 aa26.95■■□□□ 1.9
TPM4-204ENST00000586499 GLI3P10071 1580 aa26.95■■□□□ 1.9
TPM4-204ENST00000586499 NWD2Q9ULI1 1742 aa26.95■■□□□ 1.9
TPM4-204ENST00000586499 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
TPM4-204ENST00000586499 VPS72Q15906 364 aa26.94■■□□□ 1.9
TPM4-204ENST00000586499 CCDC9Q9Y3X0 531 aaKnown RBP26.94■■□□□ 1.9
TPM4-204ENST00000586499 ATAD2Q6PL18 1390 aa26.94■■□□□ 1.9
TPM4-204ENST00000586499 KIAA0232Q92628 1395 aa26.94■■□□□ 1.9
TPM4-204ENST00000586499 CHRNA2Q15822 529 aa26.93■■□□□ 1.9
TPM4-204ENST00000586499 COL14A1Q05707 1796 aaKnown RBP26.93■■□□□ 1.9
TPM4-204ENST00000586499 CCER1Q8TC90 406 aaPredicted RBP26.92■■□□□ 1.9
TPM4-204ENST00000586499 SSH2Q76I76 1423 aa26.91■■□□□ 1.9
TPM4-204ENST00000586499 NLRP13Q86W25 1043 aa26.91■■□□□ 1.9
TPM4-204ENST00000586499 TESK2Q96S53 571 aa26.91■■□□□ 1.9
TPM4-204ENST00000586499 BRD4O60885 1362 aaPredicted RBP26.91■■□□□ 1.9
TPM4-204ENST00000586499 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
TPM4-204ENST00000586499 TIMELESSQ9UNS1 1208 aa26.9■■□□□ 1.9
TPM4-204ENST00000586499 NRAPQ86VF7 1730 aa26.9■■□□□ 1.9
TPM4-204ENST00000586499 USP19O94966 1318 aa26.9■■□□□ 1.9
TPM4-204ENST00000586499 NLRP6P59044 892 aa26.89■■□□□ 1.9
TPM4-204ENST00000586499 TMC1Q8TDI8 760 aa26.88■■□□□ 1.89
TPM4-204ENST00000586499 CPSF1Q10570 1443 aaKnown RBP26.88■■□□□ 1.89
TPM4-204ENST00000586499 TTC21BQ7Z4L5 1316 aa26.88■■□□□ 1.89
TPM4-204ENST00000586499 AKAP12Q02952 1782 aa26.87■■□□□ 1.89
TPM4-204ENST00000586499 GCP02774 474 aa26.87■■□□□ 1.89
TPM4-204ENST00000586499 SLC12A5Q9H2X9 1139 aa26.87■■□□□ 1.89
TPM4-204ENST00000586499 NRKQ7Z2Y5 1582 aa26.87■■□□□ 1.89
TPM4-204ENST00000586499 KTN1Q86UP2 1357 aaKnown RBP26.85■■□□□ 1.89
TPM4-204ENST00000586499 USP47Q96K76 1375 aa26.84■■□□□ 1.89
TPM4-204ENST00000586499 PIK3C2AO00443 1686 aa26.84■■□□□ 1.89
TPM4-204ENST00000586499 CD163L1Q9NR16 1453 aa26.83■■□□□ 1.89
TPM4-204ENST00000586499 SEPT12Q8IYM1 358 aa26.83■■□□□ 1.89
TPM4-204ENST00000586499 ONECUT3O60422 494 aaPredicted RBP26.82■■□□□ 1.88
TPM4-204ENST00000586499 STRN4Q9NRL3 753 aa26.82■■□□□ 1.88
TPM4-204ENST00000586499 CPDO75976 1380 aa26.81■■□□□ 1.88
TPM4-204ENST00000586499 ZBTB7CA1YPR0 619 aa26.8■■□□□ 1.88
TPM4-204ENST00000586499 FAM98CQ17RN3 349 aaKnown RBP26.8■■□□□ 1.88
TPM4-204ENST00000586499 PUS7Q96PZ0 661 aaKnown RBP26.8■■□□□ 1.88
TPM4-204ENST00000586499 SPATA31A5Q5VU36 1347 aa26.8■■□□□ 1.88
TPM4-204ENST00000586499 SPATA31A7Q8IWB4 1347 aa26.8■■□□□ 1.88
TPM4-204ENST00000586499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.79■■□□□ 1.88
TPM4-204ENST00000586499 TTC21AQ8NDW8 1320 aa26.79■■□□□ 1.88
TPM4-204ENST00000586499 BRWD3Q6RI45 1802 aa26.79■■□□□ 1.88
TPM4-204ENST00000586499 ZRANB1Q9UGI0 708 aa26.78■■□□□ 1.88
TPM4-204ENST00000586499 SLIT3O75094 1523 aa26.78■■□□□ 1.88
TPM4-204ENST00000586499 CAMTA1Q9Y6Y1 1673 aa26.78■■□□□ 1.88
TPM4-204ENST00000586499 MON2Q7Z3U7 1717 aa26.78■■□□□ 1.88
TPM4-204ENST00000586499 A0A0G2JS52 829 aa26.77■■□□□ 1.88
TPM4-204ENST00000586499 EVA1CP58658 441 aa26.77■■□□□ 1.88
TPM4-204ENST00000586499 MYT1Q01538 1121 aa26.77■■□□□ 1.88
TPM4-204ENST00000586499 HDGFL2Q7Z4V5 671 aaPredicted RBP26.77■■□□□ 1.88
TPM4-204ENST00000586499 EP400Q96L91 3159 aa26.76■■□□□ 1.87
TPM4-204ENST00000586499 SOX12O15370 315 aa26.76■■□□□ 1.87
TPM4-204ENST00000586499 A0A1W2PP64 1363 aa26.74■■□□□ 1.87
TPM4-204ENST00000586499 LMO7Q8WWI1 1683 aa26.74■■□□□ 1.87
TPM4-204ENST00000586499 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
TPM4-204ENST00000586499 NME9Q86XW9 330 aa26.74■■□□□ 1.87
TPM4-204ENST00000586499 TERF2IPQ9NYB0 399 aa26.74■■□□□ 1.87
TPM4-204ENST00000586499 SPATA31A1Q5TZJ5 1347 aa26.73■■□□□ 1.87
TPM4-204ENST00000586499 TMF1P82094 1093 aa26.73■■□□□ 1.87
TPM4-204ENST00000586499 LARP1Q6PKG0 1096 aaKnown RBP26.73■■□□□ 1.87
TPM4-204ENST00000586499 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
TPM4-204ENST00000586499 KRT27Q7Z3Y8 459 aa26.71■■□□□ 1.87
TPM4-204ENST00000586499 KCNH5Q8NCM2 988 aa26.69■■□□□ 1.86
TPM4-204ENST00000586499 AATKQ6ZMQ8 1374 aa26.69■■□□□ 1.86
TPM4-204ENST00000586499 EDC4Q6P2E9 1401 aaKnown RBP26.68■■□□□ 1.86
TPM4-204ENST00000586499 ARHGEF25Q86VW2 580 aa26.68■■□□□ 1.86
TPM4-204ENST00000586499 AXIN2Q9Y2T1 843 aa26.68■■□□□ 1.86
TPM4-204ENST00000586499 USP31Q70CQ4 1352 aa26.68■■□□□ 1.86
TPM4-204ENST00000586499 COL5A2P05997 1499 aaPredicted RBP26.67■■□□□ 1.86
TPM4-204ENST00000586499 NINLQ9Y2I6 1382 aa26.66■■□□□ 1.86
TPM4-204ENST00000586499 COL18A1P39060 1754 aa26.66■■□□□ 1.86
TPM4-204ENST00000586499 FAM182BQ5T319 152 aa26.65■■□□□ 1.86
TPM4-204ENST00000586499 NFAT5O94916 1531 aa26.65■■□□□ 1.86
TPM4-204ENST00000586499 THSD7AQ9UPZ6 1657 aa26.64■■□□□ 1.86
TPM4-204ENST00000586499 TCP11L2Q8N4U5 519 aa26.62■■□□□ 1.85
TPM4-204ENST00000586499 CCDC125Q86Z20 511 aa26.61■■□□□ 1.85
TPM4-204ENST00000586499 ANKRD36BQ8N2N9 1353 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms