RNA–Protein interactions for RNA: ENST00000586118.5

MBD1-213, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-213ENST00000586118 ACEP12821 1306 aa24.77■■□□□ 1.56
MBD1-213ENST00000586118 PPIP5K1Q6PFW1 1433 aa24.77■■□□□ 1.56
MBD1-213ENST00000586118 PLEKHG3A1L390 1219 aa24.76■■□□□ 1.55
MBD1-213ENST00000586118 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
MBD1-213ENST00000586118 EVC2Q86UK5 1308 aa24.76■■□□□ 1.55
MBD1-213ENST00000586118 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
MBD1-213ENST00000586118 GJD4Q96KN9 370 aaPredicted RBP24.74■■□□□ 1.55
MBD1-213ENST00000586118 PLCH1Q4KWH8 1693 aa24.72■■□□□ 1.55
MBD1-213ENST00000586118 UPF1Q92900 1129 aaKnown RBP eCLIP24.72■■□□□ 1.55
MBD1-213ENST00000586118 CARD11Q9BXL7 1154 aa24.72■■□□□ 1.55
MBD1-213ENST00000586118 RALGAPBQ86X10 1494 aa24.71■■□□□ 1.55
MBD1-213ENST00000586118 NWD2Q9ULI1 1742 aa24.7■■□□□ 1.54
MBD1-213ENST00000586118 ATAD2Q6PL18 1390 aa24.69■■□□□ 1.54
MBD1-213ENST00000586118 CCDC9Q9Y3X0 531 aaKnown RBP24.69■■□□□ 1.54
MBD1-213ENST00000586118 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
MBD1-213ENST00000586118 VPS72Q15906 364 aa24.67■■□□□ 1.54
MBD1-213ENST00000586118 PRDM11Q9NQV5 511 aa24.67■■□□□ 1.54
MBD1-213ENST00000586118 COL14A1Q05707 1796 aaKnown RBP24.67■■□□□ 1.54
MBD1-213ENST00000586118 BRD4O60885 1362 aaPredicted RBP24.67■■□□□ 1.54
MBD1-213ENST00000586118 NUTM2GQ5VZR2 741 aa24.66■■□□□ 1.54
MBD1-213ENST00000586118 ABTB2Q8N961 1025 aa24.66■■□□□ 1.54
MBD1-213ENST00000586118 BTG4Q9NY30 223 aa24.66■■□□□ 1.54
MBD1-213ENST00000586118 CABP1Q9NZU7 370 aa24.66■■□□□ 1.54
MBD1-213ENST00000586118 CRYBG1Q9Y4K1 1723 aa24.66■■□□□ 1.54
MBD1-213ENST00000586118 GLI3P10071 1580 aa24.65■■□□□ 1.54
MBD1-213ENST00000586118 EP400Q96L91 3159 aa24.64■■□□□ 1.54
MBD1-213ENST00000586118 SBNO2Q9Y2G9 1366 aa24.64■■□□□ 1.53
MBD1-213ENST00000586118 PHRF1Q9P1Y6 1649 aaKnown RBP24.63■■□□□ 1.53
MBD1-213ENST00000586118 USP6P35125 1406 aa24.62■■□□□ 1.53
MBD1-213ENST00000586118 NLRP13Q86W25 1043 aa24.61■■□□□ 1.53
MBD1-213ENST00000586118 KIAA0232Q92628 1395 aa24.61■■□□□ 1.53
MBD1-213ENST00000586118 NRAPQ86VF7 1730 aa24.6■■□□□ 1.53
MBD1-213ENST00000586118 USP19O94966 1318 aa24.59■■□□□ 1.53
MBD1-213ENST00000586118 A0A0G2JS52 829 aa24.58■■□□□ 1.53
MBD1-213ENST00000586118 ZC3H6P61129 1189 aaKnown RBP24.58■■□□□ 1.53
MBD1-213ENST00000586118 MYT1Q01538 1121 aa24.58■■□□□ 1.53
MBD1-213ENST00000586118 NRKQ7Z2Y5 1582 aa24.58■■□□□ 1.52
MBD1-213ENST00000586118 SEPT12Q8IYM1 358 aa24.56■■□□□ 1.52
MBD1-213ENST00000586118 CHRNA2Q15822 529 aa24.55■■□□□ 1.52
MBD1-213ENST00000586118 ZNF692Q9BU19 519 aaPredicted RBP24.55■■□□□ 1.52
MBD1-213ENST00000586118 NLRP6P59044 892 aa24.53■■□□□ 1.52
MBD1-213ENST00000586118 CPDO75976 1380 aa24.53■■□□□ 1.52
MBD1-213ENST00000586118 SPATA31A5Q5VU36 1347 aa24.52■■□□□ 1.52
MBD1-213ENST00000586118 SPATA31A7Q8IWB4 1347 aa24.52■■□□□ 1.52
MBD1-213ENST00000586118 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
MBD1-213ENST00000586118 ONECUT3O60422 494 aaPredicted RBP24.51■■□□□ 1.51
MBD1-213ENST00000586118 GCP02774 474 aa24.51■■□□□ 1.51
MBD1-213ENST00000586118 FAM98CQ17RN3 349 aaKnown RBP24.51■■□□□ 1.51
MBD1-213ENST00000586118 STRN4Q9NRL3 753 aa24.51■■□□□ 1.51
MBD1-213ENST00000586118 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
MBD1-213ENST00000586118 SSH2Q76I76 1423 aa24.51■■□□□ 1.51
MBD1-213ENST00000586118 TTC21BQ7Z4L5 1316 aa24.49■■□□□ 1.51
MBD1-213ENST00000586118 TTC21AQ8NDW8 1320 aa24.49■■□□□ 1.51
MBD1-213ENST00000586118 CPSF1Q10570 1443 aaKnown RBP24.49■■□□□ 1.51
MBD1-213ENST00000586118 AKAP12Q02952 1782 aa24.49■■□□□ 1.51
MBD1-213ENST00000586118 ZBTB7CA1YPR0 619 aa24.48■■□□□ 1.51
MBD1-213ENST00000586118 SLC24A1O60721 1099 aa24.48■■□□□ 1.51
MBD1-213ENST00000586118 EVA1CP58658 441 aa24.48■■□□□ 1.51
MBD1-213ENST00000586118 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
MBD1-213ENST00000586118 CCDC125Q86Z20 511 aa24.48■■□□□ 1.51
MBD1-213ENST00000586118 TMC1Q8TDI8 760 aa24.48■■□□□ 1.51
MBD1-213ENST00000586118 PIK3C2AO00443 1686 aa24.47■■□□□ 1.51
MBD1-213ENST00000586118 SLIT3O75094 1523 aa24.47■■□□□ 1.51
MBD1-213ENST00000586118 TIMELESSQ9UNS1 1208 aa24.47■■□□□ 1.51
MBD1-213ENST00000586118 ST20-MTHFSA0A0A6YYL1 179 aa24.46■■□□□ 1.51
MBD1-213ENST00000586118 HDGFL2Q7Z4V5 671 aaPredicted RBP24.46■■□□□ 1.51
MBD1-213ENST00000586118 BRWD3Q6RI45 1802 aa24.45■■□□□ 1.5
MBD1-213ENST00000586118 SPATA31A1Q5TZJ5 1347 aa24.45■■□□□ 1.5
MBD1-213ENST00000586118 PUS7Q96PZ0 661 aaKnown RBP24.44■■□□□ 1.5
MBD1-213ENST00000586118 LMO7Q8WWI1 1683 aa24.43■■□□□ 1.5
MBD1-213ENST00000586118 CAMTA1Q9Y6Y1 1673 aa24.43■■□□□ 1.5
MBD1-213ENST00000586118 BLMP54132 1417 aaPredicted RBP24.43■■□□□ 1.5
MBD1-213ENST00000586118 USP47Q96K76 1375 aa24.42■■□□□ 1.5
MBD1-213ENST00000586118 MON2Q7Z3U7 1717 aa24.42■■□□□ 1.5
MBD1-213ENST00000586118 SF3B2Q13435 895 aaKnown RBP24.42■■□□□ 1.5
MBD1-213ENST00000586118 KCNH5Q8NCM2 988 aa24.42■■□□□ 1.5
MBD1-213ENST00000586118 TESK2Q96S53 571 aa24.42■■□□□ 1.5
MBD1-213ENST00000586118 TERF2IPQ9NYB0 399 aa24.42■■□□□ 1.5
MBD1-213ENST00000586118 USP35Q9P2H5 1018 aa24.42■■□□□ 1.5
MBD1-213ENST00000586118 NINLQ9Y2I6 1382 aa24.41■■□□□ 1.5
MBD1-213ENST00000586118 THSD7AQ9UPZ6 1657 aa24.4■■□□□ 1.5
MBD1-213ENST00000586118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.4■■□□□ 1.5
MBD1-213ENST00000586118 AATKQ6ZMQ8 1374 aa24.4■■□□□ 1.5
MBD1-213ENST00000586118 COL5A2P05997 1499 aaPredicted RBP24.39■■□□□ 1.5
MBD1-213ENST00000586118 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.5
MBD1-213ENST00000586118 SOX12O15370 315 aa24.39■■□□□ 1.49
MBD1-213ENST00000586118 LARP1Q6PKG0 1096 aaKnown RBP24.39■■□□□ 1.49
MBD1-213ENST00000586118 SLC12A5Q9H2X9 1139 aa24.39■■□□□ 1.49
MBD1-213ENST00000586118 EDC4Q6P2E9 1401 aaKnown RBP24.38■■□□□ 1.49
MBD1-213ENST00000586118 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
MBD1-213ENST00000586118 TCP11L2Q8N4U5 519 aa24.37■■□□□ 1.49
MBD1-213ENST00000586118 A0A1W2PP64 1363 aa24.37■■□□□ 1.49
MBD1-213ENST00000586118 TMF1P82094 1093 aa24.36■■□□□ 1.49
MBD1-213ENST00000586118 BARGINQ6ZT62 677 aa24.35■■□□□ 1.49
MBD1-213ENST00000586118 CRB1P82279 1406 aa24.35■■□□□ 1.49
MBD1-213ENST00000586118 USP31Q70CQ4 1352 aa24.33■■□□□ 1.49
MBD1-213ENST00000586118 ARHGEF25Q86VW2 580 aa24.33■■□□□ 1.49
MBD1-213ENST00000586118 NME9Q86XW9 330 aa24.33■■□□□ 1.49
MBD1-213ENST00000586118 THRAP3Q9Y2W1 955 aaKnown RBP24.33■■□□□ 1.49
MBD1-213ENST00000586118 NFAT5O94916 1531 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms