RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PRKD2Q9BZL6 878 aa9.45□□□□□ -0.9
SMAD4-203ENST00000585448 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
SMAD4-203ENST00000585448 CTHP32929 405 aa9.44□□□□□ -0.9
SMAD4-203ENST00000585448 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
SMAD4-203ENST00000585448 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
SMAD4-203ENST00000585448 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
SMAD4-203ENST00000585448 NR6A1Q15406 480 aa9.42□□□□□ -0.9
SMAD4-203ENST00000585448 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
SMAD4-203ENST00000585448 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
SMAD4-203ENST00000585448 FAM9AQ8IZU1 332 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-203ENST00000585448 GPSM3Q9Y4H4 160 aa9.41□□□□□ -0.9
SMAD4-203ENST00000585448 ZNF511Q8NB15 262 aa9.4□□□□□ -0.9
SMAD4-203ENST00000585448 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
SMAD4-203ENST00000585448 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
SMAD4-203ENST00000585448 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
SMAD4-203ENST00000585448 PRM3Q9NNZ6 103 aa9.39□□□□□ -0.91
SMAD4-203ENST00000585448 GPR37L1O60883 481 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 SH3BP2P78314 561 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 PRR20EP86478 221 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 PRR20CP86479 221 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 PRR20DP86480 221 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 PRR20BP86481 221 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 PRR20AP86496 221 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 ZNF697Q5TEC3 545 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
SMAD4-203ENST00000585448 WNT7AO00755 349 aa9.37□□□□□ -0.91
SMAD4-203ENST00000585448 SKOR1P84550 965 aa9.37□□□□□ -0.91
SMAD4-203ENST00000585448 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
SMAD4-203ENST00000585448 BAP1Q92560 729 aa9.37□□□□□ -0.91
SMAD4-203ENST00000585448 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
SMAD4-203ENST00000585448 MPNDQ8N594 471 aa9.36□□□□□ -0.91
SMAD4-203ENST00000585448 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
SMAD4-203ENST00000585448 GDF9O60383 454 aa9.35□□□□□ -0.91
SMAD4-203ENST00000585448 ZEB1P37275 1124 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-203ENST00000585448 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-203ENST00000585448 ACIN1Q9UKV3 1341 aaKnown RBP9.34□□□□□ -0.91
SMAD4-203ENST00000585448 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
SMAD4-203ENST00000585448 TRIM67Q6ZTA4 783 aa9.33□□□□□ -0.92
SMAD4-203ENST00000585448 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
SMAD4-203ENST00000585448 PKD2L1Q9P0L9 805 aa9.33□□□□□ -0.92
SMAD4-203ENST00000585448 PTK2Q05397 1052 aa9.32□□□□□ -0.92
SMAD4-203ENST00000585448 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
SMAD4-203ENST00000585448 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
SMAD4-203ENST00000585448 SIAH2O43255 324 aa9.31□□□□□ -0.92
SMAD4-203ENST00000585448 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
SMAD4-203ENST00000585448 TBC1D2BQ9UPU7 963 aa9.31□□□□□ -0.92
SMAD4-203ENST00000585448 COG6Q9Y2V7 657 aa9.31□□□□□ -0.92
SMAD4-203ENST00000585448 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
SMAD4-203ENST00000585448 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
SMAD4-203ENST00000585448 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
SMAD4-203ENST00000585448 ZBBXA8MT70 800 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 LAPTM4AQ15012 233 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 EHBP1Q8NDI1 1231 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 FOXJ1Q92949 421 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 MRGPRX2Q96LB1 330 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 ARHGAP9Q9BRR9 750 aa9.29□□□□□ -0.92
SMAD4-203ENST00000585448 IRF5Q13568 498 aa9.28□□□□□ -0.92
SMAD4-203ENST00000585448 FAM174AQ8TBP5 190 aa9.28□□□□□ -0.92
SMAD4-203ENST00000585448 CDK15Q96Q40 435 aa9.28□□□□□ -0.92
SMAD4-203ENST00000585448 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
SMAD4-203ENST00000585448 MAP4K5Q9Y4K4 846 aa9.28□□□□□ -0.92
SMAD4-203ENST00000585448 A6NJR5 290 aa9.27□□□□□ -0.93
SMAD4-203ENST00000585448 RAD21O60216 631 aa9.27□□□□□ -0.93
SMAD4-203ENST00000585448 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-203ENST00000585448 NR1H3Q13133 447 aa9.27□□□□□ -0.93
SMAD4-203ENST00000585448 WASHC4Q2M389 1173 aa9.27□□□□□ -0.93
SMAD4-203ENST00000585448 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
SMAD4-203ENST00000585448 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
SMAD4-203ENST00000585448 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
SMAD4-203ENST00000585448 SNIP1Q8TAD8 396 aaKnown RBP9.26□□□□□ -0.93
SMAD4-203ENST00000585448 NRG2O14511 850 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-203ENST00000585448 FBXO45P0C2W1 286 aa9.25□□□□□ -0.93
SMAD4-203ENST00000585448 AGERQ15109 404 aa9.25□□□□□ -0.93
SMAD4-203ENST00000585448 ANP32EQ9BTT0 268 aa9.25□□□□□ -0.93
SMAD4-203ENST00000585448 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
SMAD4-203ENST00000585448 ZNF330Q9Y3S2 320 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-203ENST00000585448 ZBTB33Q86T24 672 aa9.24□□□□□ -0.93
SMAD4-203ENST00000585448 WWC1Q8IX03 1113 aa9.24□□□□□ -0.93
SMAD4-203ENST00000585448 ADAM32Q8TC27 787 aa9.24□□□□□ -0.93
SMAD4-203ENST00000585448 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
SMAD4-203ENST00000585448 FOXC1Q12948 553 aa9.23□□□□□ -0.93
SMAD4-203ENST00000585448 FNBP4Q8N3X1 1017 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-203ENST00000585448 MAGEB6P1A0A0J9YX57 407 aa9.22□□□□□ -0.93
SMAD4-203ENST00000585448 TNFRSF10AO00220 468 aa9.22□□□□□ -0.93
SMAD4-203ENST00000585448 SOX11P35716 441 aa9.22□□□□□ -0.93
SMAD4-203ENST00000585448 CYP4X1Q8N118 509 aa9.22□□□□□ -0.93
SMAD4-203ENST00000585448 ABL2P42684 1182 aa9.21□□□□□ -0.94
SMAD4-203ENST00000585448 CCDC125Q86Z20 511 aa9.21□□□□□ -0.94
SMAD4-203ENST00000585448 SLC10A4Q96EP9 437 aa9.21□□□□□ -0.94
SMAD4-203ENST00000585448 IRX2Q9BZI1 471 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-203ENST00000585448 GFRA3O60609 400 aa9.2□□□□□ -0.94
SMAD4-203ENST00000585448 ADH1CP00326 375 aa9.2□□□□□ -0.94
SMAD4-203ENST00000585448 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
SMAD4-203ENST00000585448 PROSER2Q86WR7 435 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-203ENST00000585448 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
SMAD4-203ENST00000585448 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMAD4-203ENST00000585448 NR5A1Q13285 461 aa9.19□□□□□ -0.94
SMAD4-203ENST00000585448 CLUAP1Q96AJ1 413 aa9.19□□□□□ -0.94
SMAD4-203ENST00000585448 PCGF6Q9BYE7 350 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms