RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 DEFB132Q7Z7B7 95 aa22.86■■□□□ 1.25
SKA2-209ENST00000583976 THSD7AQ9UPZ6 1657 aa22.85■■□□□ 1.25
SKA2-209ENST00000583976 CCDC125Q86Z20 511 aa22.85■■□□□ 1.25
SKA2-209ENST00000583976 ZRANB1Q9UGI0 708 aa22.85■■□□□ 1.25
SKA2-209ENST00000583976 BTG4Q9NY30 223 aa22.84■■□□□ 1.25
SKA2-209ENST00000583976 A0A0G2JS52 829 aa22.83■■□□□ 1.25
SKA2-209ENST00000583976 MYT1Q01538 1121 aa22.83■■□□□ 1.25
SKA2-209ENST00000583976 NRKQ7Z2Y5 1582 aa22.82■■□□□ 1.24
SKA2-209ENST00000583976 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
SKA2-209ENST00000583976 NGDNQ8NEJ9 315 aaKnown RBP22.82■■□□□ 1.24
SKA2-209ENST00000583976 PAK3O75914 559 aaPredicted RBP22.81■■□□□ 1.24
SKA2-209ENST00000583976 KRT27Q7Z3Y8 459 aa22.81■■□□□ 1.24
SKA2-209ENST00000583976 ONECUT3O60422 494 aaPredicted RBP22.8■■□□□ 1.24
SKA2-209ENST00000583976 NUDT16Q96DE0 195 aaKnown RBP22.79■■□□□ 1.24
SKA2-209ENST00000583976 TNS1Q9HBL0 1735 aaKnown RBP22.79■■□□□ 1.24
SKA2-209ENST00000583976 KIAA0232Q92628 1395 aa22.78■■□□□ 1.24
SKA2-209ENST00000583976 RGPD1P0DJD0 1748 aa22.77■■□□□ 1.24
SKA2-209ENST00000583976 HRCP23327 699 aa22.77■■□□□ 1.24
SKA2-209ENST00000583976 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
SKA2-209ENST00000583976 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
SKA2-209ENST00000583976 PRDM11Q9NQV5 511 aa22.76■■□□□ 1.23
SKA2-209ENST00000583976 POLR3AO14802 1390 aaPredicted RBP22.76■■□□□ 1.23
SKA2-209ENST00000583976 FAM182BQ5T319 152 aa22.75■■□□□ 1.23
SKA2-209ENST00000583976 NUTM2GQ5VZR2 741 aa22.75■■□□□ 1.23
SKA2-209ENST00000583976 CDK19Q9BWU1 502 aa22.75■■□□□ 1.23
SKA2-209ENST00000583976 SPATA31A5Q5VU36 1347 aa22.75■■□□□ 1.23
SKA2-209ENST00000583976 SPATA31A7Q8IWB4 1347 aa22.75■■□□□ 1.23
SKA2-209ENST00000583976 SF3B2Q13435 895 aaKnown RBP22.74■■□□□ 1.23
SKA2-209ENST00000583976 CHRNA2Q15822 529 aa22.74■■□□□ 1.23
SKA2-209ENST00000583976 NBPF1Q3BBV0 1214 aa22.74■■□□□ 1.23
SKA2-209ENST00000583976 LRP5O75197 1615 aa22.72■■□□□ 1.23
SKA2-209ENST00000583976 LMO7Q8WWI1 1683 aa22.72■■□□□ 1.23
SKA2-209ENST00000583976 ACEP12821 1306 aa22.72■■□□□ 1.23
SKA2-209ENST00000583976 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
SKA2-209ENST00000583976 ZC3H6P61129 1189 aaKnown RBP22.69■■□□□ 1.22
SKA2-209ENST00000583976 PPIP5K1Q6PFW1 1433 aa22.68■■□□□ 1.22
SKA2-209ENST00000583976 STRN4Q9NRL3 753 aa22.68■■□□□ 1.22
SKA2-209ENST00000583976 CAMTA1Q9Y6Y1 1673 aa22.68■■□□□ 1.22
SKA2-209ENST00000583976 SSH2Q76I76 1423 aa22.67■■□□□ 1.22
SKA2-209ENST00000583976 SPATA31A1Q5TZJ5 1347 aa22.67■■□□□ 1.22
SKA2-209ENST00000583976 PSDA5PKW4 1024 aaPredicted RBP22.66■■□□□ 1.22
SKA2-209ENST00000583976 CCDC61Q9Y6R9 512 aa22.66■■□□□ 1.22
SKA2-209ENST00000583976 TRPM1Q7Z4N2 1603 aa22.66■■□□□ 1.22
SKA2-209ENST00000583976 USP19O94966 1318 aa22.65■■□□□ 1.22
SKA2-209ENST00000583976 BAG6P46379 1132 aa22.65■■□□□ 1.22
SKA2-209ENST00000583976 NBPF8Q3BBV2 869 aa22.65■■□□□ 1.22
SKA2-209ENST00000583976 CENPJQ9HC77 1338 aaPredicted RBP22.64■■□□□ 1.22
SKA2-209ENST00000583976 PLEKHG3A1L390 1219 aa22.63■■□□□ 1.21
SKA2-209ENST00000583976 EN1Q05925 392 aaPredicted RBP22.63■■□□□ 1.21
SKA2-209ENST00000583976 CABP2Q9NPB3 220 aa22.63■■□□□ 1.21
SKA2-209ENST00000583976 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
SKA2-209ENST00000583976 PIK3C2AO00443 1686 aa22.62■■□□□ 1.21
SKA2-209ENST00000583976 SRPK2P78362 688 aaKnown RBP22.62■■□□□ 1.21
SKA2-209ENST00000583976 USP35Q9P2H5 1018 aa22.62■■□□□ 1.21
SKA2-209ENST00000583976 CPDO75976 1380 aa22.61■■□□□ 1.21
SKA2-209ENST00000583976 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
SKA2-209ENST00000583976 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
SKA2-209ENST00000583976 USP6P35125 1406 aa22.59■■□□□ 1.21
SKA2-209ENST00000583976 SLIT3O75094 1523 aa22.59■■□□□ 1.21
SKA2-209ENST00000583976 RREB1Q92766 1687 aa22.58■■□□□ 1.21
SKA2-209ENST00000583976 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.21
SKA2-209ENST00000583976 PARP4Q9UKK3 1724 aaKnown RBP22.57■■□□□ 1.2
SKA2-209ENST00000583976 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
SKA2-209ENST00000583976 LRRC37A3O60309 1634 aa22.57■■□□□ 1.2
SKA2-209ENST00000583976 WNK3Q9BYP7 1800 aa22.56■■□□□ 1.2
SKA2-209ENST00000583976 TRIM37O94972 964 aa22.55■■□□□ 1.2
SKA2-209ENST00000583976 L3MBTL2Q969R5 705 aa22.55■■□□□ 1.2
SKA2-209ENST00000583976 AKAP12Q02952 1782 aa22.54■■□□□ 1.2
SKA2-209ENST00000583976 EZH2Q15910 746 aaKnown RBP22.54■■□□□ 1.2
SKA2-209ENST00000583976 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 GCP02774 474 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 EVA1CP58658 441 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 R3HDM1Q15032 1099 aaKnown RBP22.52■■□□□ 1.2
SKA2-209ENST00000583976 BARGINQ6ZT62 677 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 SIN3AQ96ST3 1273 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 CABP1Q9NZU7 370 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 COL18A1P39060 1754 aa22.52■■□□□ 1.2
SKA2-209ENST00000583976 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
SKA2-209ENST00000583976 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
SKA2-209ENST00000583976 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
SKA2-209ENST00000583976 FAM196AQ6ZSG2 479 aa22.49■■□□□ 1.19
SKA2-209ENST00000583976 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
SKA2-209ENST00000583976 CRB1P82279 1406 aa22.48■■□□□ 1.19
SKA2-209ENST00000583976 CAMKK2Q96RR4 588 aa22.48■■□□□ 1.19
SKA2-209ENST00000583976 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
SKA2-209ENST00000583976 CPSF1Q10570 1443 aaKnown RBP22.47■■□□□ 1.19
SKA2-209ENST00000583976 MON2Q7Z3U7 1717 aa22.46■■□□□ 1.19
SKA2-209ENST00000583976 RGPD5Q99666 1765 aa22.46■■□□□ 1.19
SKA2-209ENST00000583976 APBA3O96018 575 aa22.45■■□□□ 1.18
SKA2-209ENST00000583976 NLRP6P59044 892 aa22.45■■□□□ 1.18
SKA2-209ENST00000583976 PDE3BQ13370 1112 aa22.45■■□□□ 1.18
SKA2-209ENST00000583976 EVC2Q86UK5 1308 aa22.45■■□□□ 1.18
SKA2-209ENST00000583976 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
SKA2-209ENST00000583976 NFAT5O94916 1531 aa22.45■■□□□ 1.18
SKA2-209ENST00000583976 NEUROD1Q13562 356 aa22.44■■□□□ 1.18
SKA2-209ENST00000583976 PARD3Q8TEW0 1356 aa22.44■■□□□ 1.18
SKA2-209ENST00000583976 SBF2Q86WG5 1849 aa22.43■■□□□ 1.18
SKA2-209ENST00000583976 OVOS2A0A0G2JMS6 1433 aa22.41■■□□□ 1.18
SKA2-209ENST00000583976 OVOS2A0A0J9YW53 1432 aa22.41■■□□□ 1.18
SKA2-209ENST00000583976 OVOS2Q6IE36 1432 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms