RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 A0A0G2JS52 829 aa30.04■■■□□ 2.4
SRSF1-206ENST00000583741 WASLO00401 505 aaPredicted RBP30.04■■■□□ 2.4
SRSF1-206ENST00000583741 MYT1Q01538 1121 aa30.04■■■□□ 2.4
SRSF1-206ENST00000583741 FAM98CQ17RN3 349 aaKnown RBP30.04■■■□□ 2.4
SRSF1-206ENST00000583741 DCAF11Q8TEB1 546 aa30.04■■■□□ 2.4
SRSF1-206ENST00000583741 ITSN1Q15811 1721 aa30.01■■■□□ 2.39
SRSF1-206ENST00000583741 PCGF6Q9BYE7 350 aa30■■■□□ 2.39
SRSF1-206ENST00000583741 ATP7BP35670 1465 aa29.99■■■□□ 2.39
SRSF1-206ENST00000583741 LRP5O75197 1615 aa29.98■■■□□ 2.39
SRSF1-206ENST00000583741 NGDNQ8NEJ9 315 aaKnown RBP29.98■■■□□ 2.39
SRSF1-206ENST00000583741 THSD7AQ9UPZ6 1657 aa29.98■■■□□ 2.39
SRSF1-206ENST00000583741 RGPD1P0DJD0 1748 aa29.96■■■□□ 2.39
SRSF1-206ENST00000583741 SPATA31A5Q5VU36 1347 aa29.96■■■□□ 2.39
SRSF1-206ENST00000583741 SPATA31A7Q8IWB4 1347 aa29.96■■■□□ 2.39
SRSF1-206ENST00000583741 PAK3O75914 559 aaPredicted RBP29.95■■■□□ 2.39
SRSF1-206ENST00000583741 PHRF1Q9P1Y6 1649 aaKnown RBP29.94■■■□□ 2.38
SRSF1-206ENST00000583741 BAG6P46379 1132 aa29.93■■■□□ 2.38
SRSF1-206ENST00000583741 FAM182BQ5T319 152 aa29.93■■■□□ 2.38
SRSF1-206ENST00000583741 STAC3Q96MF2 364 aa29.92■■■□□ 2.38
SRSF1-206ENST00000583741 PRDM11Q9NQV5 511 aa29.92■■■□□ 2.38
SRSF1-206ENST00000583741 TNS1Q9HBL0 1735 aaKnown RBP29.91■■■□□ 2.38
SRSF1-206ENST00000583741 TOPAZ1Q8N9V7 1692 aa29.91■■■□□ 2.38
SRSF1-206ENST00000583741 PSDA5PKW4 1024 aaPredicted RBP29.91■■■□□ 2.38
SRSF1-206ENST00000583741 NUDT16Q96DE0 195 aaKnown RBP29.9■■■□□ 2.38
SRSF1-206ENST00000583741 KIAA0232Q92628 1395 aa29.9■■■□□ 2.38
SRSF1-206ENST00000583741 EN1Q05925 392 aaPredicted RBP29.87■■■□□ 2.37
SRSF1-206ENST00000583741 CHRNA2Q15822 529 aa29.85■■■□□ 2.37
SRSF1-206ENST00000583741 SPATA31A1Q5TZJ5 1347 aa29.84■■■□□ 2.37
SRSF1-206ENST00000583741 DISP2A7MBM2 1401 aa29.83■■■□□ 2.37
SRSF1-206ENST00000583741 HRCP23327 699 aa29.83■■■□□ 2.37
SRSF1-206ENST00000583741 POLR3AO14802 1390 aaPredicted RBP29.83■■■□□ 2.37
SRSF1-206ENST00000583741 NUTM2GQ5VZR2 741 aa29.82■■■□□ 2.36
SRSF1-206ENST00000583741 CDK19Q9BWU1 502 aa29.82■■■□□ 2.36
SRSF1-206ENST00000583741 KIAA1210Q9ULL0 1709 aa29.82■■■□□ 2.36
SRSF1-206ENST00000583741 NRKQ7Z2Y5 1582 aa29.81■■■□□ 2.36
SRSF1-206ENST00000583741 ZC3H6P61129 1189 aaKnown RBP29.8■■■□□ 2.36
SRSF1-206ENST00000583741 STRN4Q9NRL3 753 aa29.8■■■□□ 2.36
SRSF1-206ENST00000583741 ACEP12821 1306 aa29.79■■■□□ 2.36
SRSF1-206ENST00000583741 NBPF8Q3BBV2 869 aa29.76■■■□□ 2.35
SRSF1-206ENST00000583741 CCDC61Q9Y6R9 512 aa29.75■■■□□ 2.35
SRSF1-206ENST00000583741 LMO7Q8WWI1 1683 aa29.75■■■□□ 2.35
SRSF1-206ENST00000583741 SSH2Q76I76 1423 aa29.75■■■□□ 2.35
SRSF1-206ENST00000583741 R3HDM1Q15032 1099 aaKnown RBP29.74■■■□□ 2.35
SRSF1-206ENST00000583741 CAMTA1Q9Y6Y1 1673 aa29.74■■■□□ 2.35
SRSF1-206ENST00000583741 EZH2Q15910 746 aaKnown RBP29.74■■■□□ 2.35
SRSF1-206ENST00000583741 USP35Q9P2H5 1018 aa29.74■■■□□ 2.35
SRSF1-206ENST00000583741 PLEKHG3A1L390 1219 aa29.73■■■□□ 2.35
SRSF1-206ENST00000583741 TRIM37O94972 964 aa29.73■■■□□ 2.35
SRSF1-206ENST00000583741 NBPF1Q3BBV0 1214 aa29.71■■■□□ 2.35
SRSF1-206ENST00000583741 FAM196AQ6ZSG2 479 aa29.71■■■□□ 2.35
SRSF1-206ENST00000583741 CAMKK2Q96RR4 588 aa29.7■■■□□ 2.35
SRSF1-206ENST00000583741 USP19O94966 1318 aa29.69■■■□□ 2.34
SRSF1-206ENST00000583741 ABTB2Q8N961 1025 aa29.69■■■□□ 2.34
SRSF1-206ENST00000583741 CPDO75976 1380 aa29.68■■■□□ 2.34
SRSF1-206ENST00000583741 LARP1Q6PKG0 1096 aaKnown RBP29.68■■■□□ 2.34
SRSF1-206ENST00000583741 BARGINQ6ZT62 677 aa29.68■■■□□ 2.34
SRSF1-206ENST00000583741 RREB1Q92766 1687 aa29.68■■■□□ 2.34
SRSF1-206ENST00000583741 EVA1CP58658 441 aa29.67■■■□□ 2.34
SRSF1-206ENST00000583741 PPIP5K1Q6PFW1 1433 aa29.66■■■□□ 2.34
SRSF1-206ENST00000583741 QRICH2Q9H0J4 1663 aa29.64■■■□□ 2.34
SRSF1-206ENST00000583741 NUP188Q5SRE5 1749 aa29.64■■■□□ 2.34
SRSF1-206ENST00000583741 APBA3O96018 575 aa29.63■■■□□ 2.33
SRSF1-206ENST00000583741 PARD3Q8TEW0 1356 aa29.62■■■□□ 2.33
SRSF1-206ENST00000583741 SRPK2P78362 688 aaKnown RBP29.62■■■□□ 2.33
SRSF1-206ENST00000583741 PDE3BQ13370 1112 aa29.61■■■□□ 2.33
SRSF1-206ENST00000583741 TCP11L2Q8N4U5 519 aa29.61■■■□□ 2.33
SRSF1-206ENST00000583741 PARP4Q9UKK3 1724 aaKnown RBP29.61■■■□□ 2.33
SRSF1-206ENST00000583741 COL5A2P05997 1499 aaPredicted RBP29.61■■■□□ 2.33
SRSF1-206ENST00000583741 CABP2Q9NPB3 220 aa29.61■■■□□ 2.33
SRSF1-206ENST00000583741 CENPJQ9HC77 1338 aaPredicted RBP29.6■■■□□ 2.33
SRSF1-206ENST00000583741 GCP02774 474 aa29.6■■■□□ 2.33
SRSF1-206ENST00000583741 NLRP13Q86W25 1043 aa29.59■■■□□ 2.33
SRSF1-206ENST00000583741 THRAP3Q9Y2W1 955 aaKnown RBP29.55■■■□□ 2.32
SRSF1-206ENST00000583741 USP6P35125 1406 aa29.54■■■□□ 2.32
SRSF1-206ENST00000583741 SLIT3O75094 1523 aa29.54■■■□□ 2.32
SRSF1-206ENST00000583741 PEAK1Q9H792 1746 aa29.53■■■□□ 2.32
SRSF1-206ENST00000583741 PIK3C2AO00443 1686 aa29.53■■■□□ 2.32
SRSF1-206ENST00000583741 CRB1P82279 1406 aa29.53■■■□□ 2.32
SRSF1-206ENST00000583741 BRD4O60885 1362 aaPredicted RBP29.53■■■□□ 2.32
SRSF1-206ENST00000583741 LRRC37A3O60309 1634 aa29.52■■■□□ 2.32
SRSF1-206ENST00000583741 CABP1Q9NZU7 370 aa29.51■■■□□ 2.31
SRSF1-206ENST00000583741 COL18A1P39060 1754 aa29.5■■■□□ 2.31
SRSF1-206ENST00000583741 ZBTB7CA1YPR0 619 aa29.49■■■□□ 2.31
SRSF1-206ENST00000583741 SBF2Q86WG5 1849 aa29.49■■■□□ 2.31
SRSF1-206ENST00000583741 NLRP6P59044 892 aa29.48■■■□□ 2.31
SRSF1-206ENST00000583741 WNK3Q9BYP7 1800 aa29.48■■■□□ 2.31
SRSF1-206ENST00000583741 AATKQ6ZMQ8 1374 aa29.48■■■□□ 2.31
SRSF1-206ENST00000583741 OVOS2A0A0G2JMS6 1433 aa29.46■■■□□ 2.31
SRSF1-206ENST00000583741 OVOS2A0A0J9YW53 1432 aa29.46■■■□□ 2.31
SRSF1-206ENST00000583741 OVOS2Q6IE36 1432 aa29.46■■■□□ 2.31
SRSF1-206ENST00000583741 TRPM1Q7Z4N2 1603 aa29.46■■■□□ 2.31
SRSF1-206ENST00000583741 RGPD3A6NKT7 1758 aaPredicted RBP29.44■■■□□ 2.3
SRSF1-206ENST00000583741 RGPD4Q7Z3J3 1758 aa29.44■■■□□ 2.3
SRSF1-206ENST00000583741 NBPF14Q5TI25 921 aa29.44■■■□□ 2.3
SRSF1-206ENST00000583741 L3MBTL2Q969R5 705 aa29.42■■■□□ 2.3
SRSF1-206ENST00000583741 AKAP12Q02952 1782 aa29.42■■■□□ 2.3
SRSF1-206ENST00000583741 RGPD5Q99666 1765 aa29.42■■■□□ 2.3
SRSF1-206ENST00000583741 AXIN2Q9Y2T1 843 aa29.41■■■□□ 2.3
SRSF1-206ENST00000583741 CPSF1Q10570 1443 aaKnown RBP29.4■■■□□ 2.3
SRSF1-206ENST00000583741 TOM1L2Q6ZVM7 507 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms