RNA–Protein interactions for RNA: ENST00000583499.1

ARHGDIA-213, Transcript of Rho GDP dissociation inhibitor alpha, human

TSL 2

Gene ARHGDIA, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGDIA-213	ENST00000583499	ARHGEF10	O15013	1369 aa		33.97	■■■■□ 3.03
ARHGDIA-213	ENST00000583499	CPSF1	Q10570	1443 aa	Known RBP	33.96	■■■■□ 3.03
ARHGDIA-213	ENST00000583499	PHF23	Q9BUL5	403 aa	Predicted RBP	33.96	■■■■□ 3.03
ARHGDIA-213	ENST00000583499	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.95	■■■■□ 3.03
ARHGDIA-213	ENST00000583499	CABLES1	Q8TDN4	633 aa		33.94	■■■■□ 3.02
ARHGDIA-213	ENST00000583499	USP54	Q70EL1	1684 aa		33.93	■■■■□ 3.02
ARHGDIA-213	ENST00000583499	NRAP	Q86VF7	1730 aa		33.93	■■■■□ 3.02
ARHGDIA-213	ENST00000583499	ADAMTS2	O95450	1211 aa		33.92	■■■■□ 3.02
ARHGDIA-213	ENST00000583499	POTEA	Q6S8J7	498 aa		33.92	■■■■□ 3.02
ARHGDIA-213	ENST00000583499	MEX3C	Q5U5Q3	659 aa	Known RBP	33.9	■■■■□ 3.02
ARHGDIA-213	ENST00000583499	NWD2	Q9ULI1	1742 aa		33.88	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	AFF2	P51816	1311 aa		33.88	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	PLEKHG5	O94827	1062 aa		33.87	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	C8orf37	Q96NL8	207 aa		33.87	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	LMOD2	Q6P5Q4	547 aa		33.86	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	SLIT3	O75094	1523 aa		33.85	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	SLIT2	O94813	1529 aa		33.84	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	COL14A1	Q05707	1796 aa	Known RBP	33.83	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	PAK3	O75914	559 aa	Predicted RBP	33.83	■■■■□ 3.01
ARHGDIA-213	ENST00000583499		A0A1W2PP64	1363 aa		33.83	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	BCL9L	Q86UU0	1499 aa		33.82	■■■■□ 3.01
ARHGDIA-213	ENST00000583499	USP19	O94966	1318 aa		33.8	■■■■□ 3
ARHGDIA-213	ENST00000583499	NUTM2G	Q5VZR2	741 aa		33.8	■■■■□ 3
ARHGDIA-213	ENST00000583499	SLC12A5	Q9H2X9	1139 aa		33.8	■■■■□ 3
ARHGDIA-213	ENST00000583499	LMO7	Q8WWI1	1683 aa		33.8	■■■■□ 3
ARHGDIA-213	ENST00000583499	BRD4	O60885	1362 aa	Predicted RBP	33.79	■■■■□ 3
ARHGDIA-213	ENST00000583499	HSPA5	P11021	654 aa	Known RBP	33.78	■■■■□ 3
ARHGDIA-213	ENST00000583499	PUS7	Q96PZ0	661 aa	Known RBP	33.78	■■■■□ 3
ARHGDIA-213	ENST00000583499	KTN1	Q86UP2	1357 aa	Known RBP	33.77	■■■■□ 3
ARHGDIA-213	ENST00000583499	ATRN	O75882	1429 aa		33.75	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	GLI3	P10071	1580 aa		33.75	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.74	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	TTC21B	Q7Z4L5	1316 aa		33.74	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	NFAT5	O94916	1531 aa		33.74	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	KIF20B	Q96Q89	1820 aa		33.73	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	NINL	Q9Y2I6	1382 aa		33.72	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	COL18A1	P39060	1754 aa		33.72	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	TMF1	P82094	1093 aa		33.72	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	NGLY1	Q96IV0	654 aa		33.72	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	TMC1	Q8TDI8	760 aa		33.71	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	EDC4	Q6P2E9	1401 aa	Known RBP	33.7	■■■□□ 2.99
ARHGDIA-213	ENST00000583499	ZNF772	Q68DY9	489 aa	Predicted RBP	33.69	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	ABTB2	Q8N961	1025 aa		33.69	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.68	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	KIAA0232	Q92628	1395 aa		33.68	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	RGPD5	Q99666	1765 aa		33.67	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	ANKRD36B	Q8N2N9	1353 aa		33.67	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	LTN1	O94822	1766 aa		33.67	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	RGS12	O14924	1447 aa		33.66	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	ZRANB1	Q9UGI0	708 aa		33.66	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	OVOS2	A0A0J9YW53	1432 aa		33.65	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	OVOS2	Q6IE36	1432 aa		33.65	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	FAM83G	A6ND36	823 aa		33.65	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	ZNF692	Q9BU19	519 aa	Predicted RBP	33.65	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	USP21	Q9UK80	565 aa		33.65	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	TTC21A	Q8NDW8	1320 aa		33.64	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	HAP1	P54257	671 aa	Predicted RBP	33.64	■■■□□ 2.98
ARHGDIA-213	ENST00000583499	CAMTA1	Q9Y6Y1	1673 aa		33.62	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	C11orf95	C9JLR9	678 aa	Predicted RBP	33.62	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	USP31	Q70CQ4	1352 aa		33.61	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	NME9	Q86XW9	330 aa		33.61	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.61	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	CPD	O75976	1380 aa		33.6	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.59	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	BRWD3	Q6RI45	1802 aa		33.58	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	SLC24A1	O60721	1099 aa		33.58	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	NLRP6	P59044	892 aa		33.58	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.58	■■■□□ 2.97
ARHGDIA-213	ENST00000583499	ZC3H6	P61129	1189 aa	Known RBP	33.57	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	CHRNA2	Q15822	529 aa		33.57	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	NLRP13	Q86W25	1043 aa		33.57	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	QTRT2	Q9H974	415 aa	Known RBP	33.56	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	TERF2IP	Q9NYB0	399 aa		33.56	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	GC	P02774	474 aa		33.55	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	UNC5CL	Q8IV45	518 aa		33.55	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	ANKRD26	Q9UPS8	1709 aa		33.54	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	PRDM11	Q9NQV5	511 aa		33.53	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	WNK3	Q9BYP7	1800 aa		33.53	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	TRPC5	Q9UL62	973 aa	Predicted RBP	33.52	■■■□□ 2.96
ARHGDIA-213	ENST00000583499	BTG4	Q9NY30	223 aa		33.51	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	NSD3	Q9BZ95	1437 aa		33.51	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	THSD7A	Q9UPZ6	1657 aa		33.51	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	COL5A2	P05997	1499 aa	Predicted RBP	33.5	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	CDCA8	Q53HL2	280 aa		33.5	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	CARD14	Q9BXL6	1004 aa		33.5	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	RXRB	P28702	533 aa		33.49	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	RBM6	P78332	1123 aa	Known RBP	33.48	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	ABCC6	O95255	1503 aa		33.48	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	VPS72	Q15906	364 aa		33.45	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	KIF7	Q2M1P5	1343 aa		33.45	■■■□□ 2.95
ARHGDIA-213	ENST00000583499	SOX12	O15370	315 aa		33.44	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	PEAK1	Q9H792	1746 aa		33.44	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	GJD4	Q96KN9	370 aa	Predicted RBP	33.43	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	POLR3GL	Q9BT43	218 aa		33.43	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	SOCS7	O14512	581 aa		33.42	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	AATK	Q6ZMQ8	1374 aa		33.42	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	ARHGEF25	Q86VW2	580 aa		33.41	■■■□□ 2.94
ARHGDIA-213	ENST00000583499	FYB1	O15117	783 aa		33.37	■■■□□ 2.93
ARHGDIA-213	ENST00000583499	AXIN2	Q9Y2T1	843 aa		33.37	■■■□□ 2.93
ARHGDIA-213	ENST00000583499	EP400	Q96L91	3159 aa		33.36	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms