RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	BLM	P54132	1417 aa	Predicted RBP	14.04	□□□□□ -0.16
DDX42-215	ENST00000582985	FAM83G	A6ND36	823 aa		14.03	□□□□□ -0.16
DDX42-215	ENST00000582985	DCAF11	Q8TEB1	546 aa		14.03	□□□□□ -0.16
DDX42-215	ENST00000582985	CCDC9	Q9Y3X0	531 aa	Known RBP	14.03	□□□□□ -0.16
DDX42-215	ENST00000582985	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.03	□□□□□ -0.16
DDX42-215	ENST00000582985	BRWD3	Q6RI45	1802 aa		14.03	□□□□□ -0.16
DDX42-215	ENST00000582985	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.02	□□□□□ -0.16
DDX42-215	ENST00000582985	EIF3A	Q14152	1382 aa	Known RBP	14.02	□□□□□ -0.17
DDX42-215	ENST00000582985	PRR36	Q9H6K5	1346 aa		14.02	□□□□□ -0.17
DDX42-215	ENST00000582985	ONECUT3	O60422	494 aa	Predicted RBP	14.02	□□□□□ -0.17
DDX42-215	ENST00000582985	TULP4	Q9NRJ4	1543 aa		14.01	□□□□□ -0.17
DDX42-215	ENST00000582985	GPRASP1	Q5JY77	1395 aa		14.01	□□□□□ -0.17
DDX42-215	ENST00000582985	WASL	O00401	505 aa	Predicted RBP	14.01	□□□□□ -0.17
DDX42-215	ENST00000582985	STAC3	Q96MF2	364 aa		14	□□□□□ -0.17
DDX42-215	ENST00000582985	ALS2	Q96Q42	1657 aa		14	□□□□□ -0.17
DDX42-215	ENST00000582985	KRT27	Q7Z3Y8	459 aa		13.99	□□□□□ -0.17
DDX42-215	ENST00000582985	NRAP	Q86VF7	1730 aa		13.98	□□□□□ -0.17
DDX42-215	ENST00000582985	SF3B2	Q13435	895 aa	Known RBP	13.98	□□□□□ -0.17
DDX42-215	ENST00000582985	DEFB132	Q7Z7B7	95 aa		13.98	□□□□□ -0.17
DDX42-215	ENST00000582985	NGDN	Q8NEJ9	315 aa	Known RBP	13.98	□□□□□ -0.17
DDX42-215	ENST00000582985	BTG4	Q9NY30	223 aa		13.98	□□□□□ -0.17
DDX42-215	ENST00000582985	HRC	P23327	699 aa		13.97	□□□□□ -0.17
DDX42-215	ENST00000582985	COL14A1	Q05707	1796 aa	Known RBP	13.96	□□□□□ -0.17
DDX42-215	ENST00000582985		A0A0G2JS52	829 aa		13.96	□□□□□ -0.17
DDX42-215	ENST00000582985	MYT1	Q01538	1121 aa		13.96	□□□□□ -0.17
DDX42-215	ENST00000582985	FAM98C	Q17RN3	349 aa	Known RBP	13.96	□□□□□ -0.17
DDX42-215	ENST00000582985	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.95	□□□□□ -0.18
DDX42-215	ENST00000582985	PAK3	O75914	559 aa	Predicted RBP	13.95	□□□□□ -0.18
DDX42-215	ENST00000582985	CRYBG1	Q9Y4K1	1723 aa		13.95	□□□□□ -0.18
DDX42-215	ENST00000582985	ATP7B	P35670	1465 aa		13.94	□□□□□ -0.18
DDX42-215	ENST00000582985	NUDT16	Q96DE0	195 aa	Known RBP	13.94	□□□□□ -0.18
DDX42-215	ENST00000582985	ITSN1	Q15811	1721 aa		13.93	□□□□□ -0.18
DDX42-215	ENST00000582985	SPATA31A5	Q5VU36	1347 aa		13.92	□□□□□ -0.18
DDX42-215	ENST00000582985	SPATA31A7	Q8IWB4	1347 aa		13.92	□□□□□ -0.18
DDX42-215	ENST00000582985	PRDM11	Q9NQV5	511 aa		13.92	□□□□□ -0.18
DDX42-215	ENST00000582985	CDK19	Q9BWU1	502 aa		13.91	□□□□□ -0.18
DDX42-215	ENST00000582985	BAG6	P46379	1132 aa		13.9	□□□□□ -0.18
DDX42-215	ENST00000582985	KIAA0232	Q92628	1395 aa		13.9	□□□□□ -0.18
DDX42-215	ENST00000582985	THSD7A	Q9UPZ6	1657 aa		13.89	□□□□□ -0.19
DDX42-215	ENST00000582985	POLR3A	O14802	1390 aa	Predicted RBP	13.89	□□□□□ -0.19
DDX42-215	ENST00000582985	FAM182B	Q5T319	152 aa		13.89	□□□□□ -0.19
DDX42-215	ENST00000582985	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.89	□□□□□ -0.19
DDX42-215	ENST00000582985	TOPAZ1	Q8N9V7	1692 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	KIAA1210	Q9ULL0	1709 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	CHRNA2	Q15822	529 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	NUTM2G	Q5VZR2	741 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	CCDC61	Q9Y6R9	512 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	ACE	P12821	1306 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	SPATA31A1	Q5TZJ5	1347 aa		13.88	□□□□□ -0.19
DDX42-215	ENST00000582985	ZC3H6	P61129	1189 aa	Known RBP	13.87	□□□□□ -0.19
DDX42-215	ENST00000582985	NBPF8	Q3BBV2	869 aa		13.87	□□□□□ -0.19
DDX42-215	ENST00000582985	RGPD1	P0DJD0	1748 aa		13.87	□□□□□ -0.19
DDX42-215	ENST00000582985	PLEKHG3	A1L390	1219 aa		13.86	□□□□□ -0.19
DDX42-215	ENST00000582985	EN1	Q05925	392 aa	Predicted RBP	13.86	□□□□□ -0.19
DDX42-215	ENST00000582985	NBPF1	Q3BBV0	1214 aa		13.86	□□□□□ -0.19
DDX42-215	ENST00000582985	STRN4	Q9NRL3	753 aa		13.86	□□□□□ -0.19
DDX42-215	ENST00000582985	PSD	A5PKW4	1024 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX42-215	ENST00000582985	LRP5	O75197	1615 aa		13.85	□□□□□ -0.19
DDX42-215	ENST00000582985	DISP2	A7MBM2	1401 aa		13.84	□□□□□ -0.19
DDX42-215	ENST00000582985	ABTB2	Q8N961	1025 aa		13.84	□□□□□ -0.19
DDX42-215	ENST00000582985	NRK	Q7Z2Y5	1582 aa		13.83	□□□□□ -0.19
DDX42-215	ENST00000582985	EVA1C	P58658	441 aa		13.83	□□□□□ -0.2
DDX42-215	ENST00000582985	TNS1	Q9HBL0	1735 aa	Known RBP	13.83	□□□□□ -0.2
DDX42-215	ENST00000582985	USP19	O94966	1318 aa		13.83	□□□□□ -0.2
DDX42-215	ENST00000582985	SSH2	Q76I76	1423 aa		13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	ABCB7	O75027	752 aa		13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	SRPK2	P78362	688 aa	Known RBP	13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	FAM196A	Q6ZSG2	479 aa		13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	USP35	Q9P2H5	1018 aa		13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	CPD	O75976	1380 aa		13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	CAMTA1	Q9Y6Y1	1673 aa		13.82	□□□□□ -0.2
DDX42-215	ENST00000582985	PPIP5K1	Q6PFW1	1433 aa		13.81	□□□□□ -0.2
DDX42-215	ENST00000582985	TRIM37	O94972	964 aa		13.81	□□□□□ -0.2
DDX42-215	ENST00000582985	BARGIN	Q6ZT62	677 aa		13.81	□□□□□ -0.2
DDX42-215	ENST00000582985	CABP2	Q9NPB3	220 aa		13.81	□□□□□ -0.2
DDX42-215	ENST00000582985	LMO7	Q8WWI1	1683 aa		13.8	□□□□□ -0.2
DDX42-215	ENST00000582985	EZH2	Q15910	746 aa	Known RBP	13.8	□□□□□ -0.2
DDX42-215	ENST00000582985	LARP1	Q6PKG0	1096 aa	Known RBP	13.8	□□□□□ -0.2
DDX42-215	ENST00000582985	NLRP13	Q86W25	1043 aa		13.8	□□□□□ -0.2
DDX42-215	ENST00000582985	GC	P02774	474 aa		13.79	□□□□□ -0.2
DDX42-215	ENST00000582985	PDE3B	Q13370	1112 aa		13.79	□□□□□ -0.2
DDX42-215	ENST00000582985	R3HDM1	Q15032	1099 aa	Known RBP	13.79	□□□□□ -0.2
DDX42-215	ENST00000582985	TCP11L2	Q8N4U5	519 aa		13.79	□□□□□ -0.2
DDX42-215	ENST00000582985	CAMKK2	Q96RR4	588 aa		13.79	□□□□□ -0.2
DDX42-215	ENST00000582985	BRD4	O60885	1362 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX42-215	ENST00000582985	QRICH2	Q9H0J4	1663 aa		13.78	□□□□□ -0.2
DDX42-215	ENST00000582985	APBA3	O96018	575 aa		13.77	□□□□□ -0.21
DDX42-215	ENST00000582985	POTEH	Q6S545	545 aa		13.77	□□□□□ -0.21
DDX42-215	ENST00000582985	CABP1	Q9NZU7	370 aa		13.77	□□□□□ -0.21
DDX42-215	ENST00000582985	THRAP3	Q9Y2W1	955 aa	Known RBP	13.77	□□□□□ -0.21
DDX42-215	ENST00000582985	COL5A2	P05997	1499 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX42-215	ENST00000582985	USP6	P35125	1406 aa		13.76	□□□□□ -0.21
DDX42-215	ENST00000582985	PARD3	Q8TEW0	1356 aa		13.76	□□□□□ -0.21
DDX42-215	ENST00000582985	L3MBTL2	Q969R5	705 aa		13.76	□□□□□ -0.21
DDX42-215	ENST00000582985	ZBTB7C	A1YPR0	619 aa		13.74	□□□□□ -0.21
DDX42-215	ENST00000582985	NLRP6	P59044	892 aa		13.74	□□□□□ -0.21
DDX42-215	ENST00000582985	SLIT3	O75094	1523 aa		13.74	□□□□□ -0.21
DDX42-215	ENST00000582985	CRB1	P82279	1406 aa		13.73	□□□□□ -0.21
DDX42-215	ENST00000582985	EVC2	Q86UK5	1308 aa		13.73	□□□□□ -0.21

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