RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 BLMP54132 1417 aaPredicted RBP20.94■□□□□ 0.94
CCDC57-214ENST00000582040 PHRF1Q9P1Y6 1649 aaKnown RBP20.93■□□□□ 0.94
CCDC57-214ENST00000582040 PAK3O75914 559 aaPredicted RBP20.92■□□□□ 0.94
CCDC57-214ENST00000582040 NUDT16Q96DE0 195 aaKnown RBP20.92■□□□□ 0.94
CCDC57-214ENST00000582040 BTG4Q9NY30 223 aa20.91■□□□□ 0.94
CCDC57-214ENST00000582040 A0A0G2JS52 829 aa20.89■□□□□ 0.93
CCDC57-214ENST00000582040 ONECUT3O60422 494 aaPredicted RBP20.89■□□□□ 0.93
CCDC57-214ENST00000582040 MYT1Q01538 1121 aa20.89■□□□□ 0.93
CCDC57-214ENST00000582040 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
CCDC57-214ENST00000582040 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
CCDC57-214ENST00000582040 KRT27Q7Z3Y8 459 aa20.87■□□□□ 0.93
CCDC57-214ENST00000582040 PRDM11Q9NQV5 511 aa20.87■□□□□ 0.93
CCDC57-214ENST00000582040 POLR3AO14802 1390 aaPredicted RBP20.86■□□□□ 0.93
CCDC57-214ENST00000582040 FAM98CQ17RN3 349 aaKnown RBP20.86■□□□□ 0.93
CCDC57-214ENST00000582040 NBPF1Q3BBV0 1214 aa20.86■□□□□ 0.93
CCDC57-214ENST00000582040 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
CCDC57-214ENST00000582040 THSD7AQ9UPZ6 1657 aa20.85■□□□□ 0.93
CCDC57-214ENST00000582040 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
CCDC57-214ENST00000582040 ACEP12821 1306 aa20.84■□□□□ 0.93
CCDC57-214ENST00000582040 QRICH2Q9H0J4 1663 aa20.84■□□□□ 0.93
CCDC57-214ENST00000582040 SF3B2Q13435 895 aaKnown RBP20.84■□□□□ 0.93
CCDC57-214ENST00000582040 NRKQ7Z2Y5 1582 aa20.84■□□□□ 0.93
CCDC57-214ENST00000582040 SPATA31A5Q5VU36 1347 aa20.83■□□□□ 0.93
CCDC57-214ENST00000582040 SPATA31A7Q8IWB4 1347 aa20.83■□□□□ 0.93
CCDC57-214ENST00000582040 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
CCDC57-214ENST00000582040 NUTM2GQ5VZR2 741 aa20.82■□□□□ 0.92
CCDC57-214ENST00000582040 CENPJQ9HC77 1338 aaPredicted RBP20.81■□□□□ 0.92
CCDC57-214ENST00000582040 PLEKHG3A1L390 1219 aa20.8■□□□□ 0.92
CCDC57-214ENST00000582040 CHRNA2Q15822 529 aa20.8■□□□□ 0.92
CCDC57-214ENST00000582040 NBPF8Q3BBV2 869 aa20.8■□□□□ 0.92
CCDC57-214ENST00000582040 SRCAPQ6ZRS2 3230 aa20.8■□□□□ 0.92
CCDC57-214ENST00000582040 PPIP5K1Q6PFW1 1433 aa20.79■□□□□ 0.92
CCDC57-214ENST00000582040 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
CCDC57-214ENST00000582040 RGPD1P0DJD0 1748 aa20.78■□□□□ 0.92
CCDC57-214ENST00000582040 ZC3H6P61129 1189 aaKnown RBP20.78■□□□□ 0.92
CCDC57-214ENST00000582040 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
CCDC57-214ENST00000582040 SPATA31A1Q5TZJ5 1347 aa20.77■□□□□ 0.91
CCDC57-214ENST00000582040 STRN4Q9NRL3 753 aa20.76■□□□□ 0.91
CCDC57-214ENST00000582040 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
CCDC57-214ENST00000582040 USP19O94966 1318 aa20.76■□□□□ 0.91
CCDC57-214ENST00000582040 FAM182BQ5T319 152 aa20.75■□□□□ 0.91
CCDC57-214ENST00000582040 ABTB2Q8N961 1025 aa20.75■□□□□ 0.91
CCDC57-214ENST00000582040 L3MBTL2Q969R5 705 aa20.75■□□□□ 0.91
CCDC57-214ENST00000582040 CABP2Q9NPB3 220 aa20.75■□□□□ 0.91
CCDC57-214ENST00000582040 BAG6P46379 1132 aa20.74■□□□□ 0.91
CCDC57-214ENST00000582040 SSH2Q76I76 1423 aa20.74■□□□□ 0.91
CCDC57-214ENST00000582040 TNS1Q9HBL0 1735 aaKnown RBP20.74■□□□□ 0.91
CCDC57-214ENST00000582040 CAMTA1Q9Y6Y1 1673 aa20.73■□□□□ 0.91
CCDC57-214ENST00000582040 CPDO75976 1380 aa20.72■□□□□ 0.91
CCDC57-214ENST00000582040 USP6P35125 1406 aa20.71■□□□□ 0.91
CCDC57-214ENST00000582040 SIN3AQ96ST3 1273 aa20.71■□□□□ 0.91
CCDC57-214ENST00000582040 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
CCDC57-214ENST00000582040 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
CCDC57-214ENST00000582040 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
CCDC57-214ENST00000582040 ROCK2O75116 1388 aaKnown RBP20.68■□□□□ 0.9
CCDC57-214ENST00000582040 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
CCDC57-214ENST00000582040 SLIT3O75094 1523 aa20.68■□□□□ 0.9
CCDC57-214ENST00000582040 LRP5O75197 1615 aa20.67■□□□□ 0.9
CCDC57-214ENST00000582040 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
CCDC57-214ENST00000582040 EVA1CP58658 441 aa20.67■□□□□ 0.9
CCDC57-214ENST00000582040 CABP1Q9NZU7 370 aa20.67■□□□□ 0.9
CCDC57-214ENST00000582040 GCP02774 474 aa20.66■□□□□ 0.9
CCDC57-214ENST00000582040 EN1Q05925 392 aaPredicted RBP20.66■□□□□ 0.9
CCDC57-214ENST00000582040 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
CCDC57-214ENST00000582040 LARP1Q6PKG0 1096 aaKnown RBP20.66■□□□□ 0.9
CCDC57-214ENST00000582040 EVC2Q86UK5 1308 aa20.66■□□□□ 0.9
CCDC57-214ENST00000582040 COL5A2P05997 1499 aaPredicted RBP20.66■□□□□ 0.9
CCDC57-214ENST00000582040 PSDA5PKW4 1024 aaPredicted RBP20.65■□□□□ 0.9
CCDC57-214ENST00000582040 BARGINQ6ZT62 677 aa20.65■□□□□ 0.9
CCDC57-214ENST00000582040 ZBTB7CA1YPR0 619 aa20.63■□□□□ 0.89
CCDC57-214ENST00000582040 AKAP12Q02952 1782 aa20.63■□□□□ 0.89
CCDC57-214ENST00000582040 PARP4Q9UKK3 1724 aaKnown RBP20.63■□□□□ 0.89
CCDC57-214ENST00000582040 NLRP6P59044 892 aa20.62■□□□□ 0.89
CCDC57-214ENST00000582040 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
CCDC57-214ENST00000582040 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
CCDC57-214ENST00000582040 TRIM37O94972 964 aa20.61■□□□□ 0.89
CCDC57-214ENST00000582040 CRB1P82279 1406 aa20.61■□□□□ 0.89
CCDC57-214ENST00000582040 PDE3BQ13370 1112 aa20.6■□□□□ 0.89
CCDC57-214ENST00000582040 AATKQ6ZMQ8 1374 aa20.59■□□□□ 0.89
CCDC57-214ENST00000582040 RREB1Q92766 1687 aa20.58■□□□□ 0.89
CCDC57-214ENST00000582040 LRRC37A3O60309 1634 aa20.58■□□□□ 0.89
CCDC57-214ENST00000582040 EZH2Q15910 746 aaKnown RBP20.58■□□□□ 0.89
CCDC57-214ENST00000582040 THRAP3Q9Y2W1 955 aaKnown RBP20.58■□□□□ 0.89
CCDC57-214ENST00000582040 COL18A1P39060 1754 aa20.58■□□□□ 0.89
CCDC57-214ENST00000582040 CPSF1Q10570 1443 aaKnown RBP20.58■□□□□ 0.88
CCDC57-214ENST00000582040 WNK3Q9BYP7 1800 aa20.57■□□□□ 0.88
CCDC57-214ENST00000582040 TTC21BQ7Z4L5 1316 aa20.56■□□□□ 0.88
CCDC57-214ENST00000582040 MON2Q7Z3U7 1717 aa20.56■□□□□ 0.88
CCDC57-214ENST00000582040 APBA3O96018 575 aa20.55■□□□□ 0.88
CCDC57-214ENST00000582040 R3HDM1Q15032 1099 aaKnown RBP20.55■□□□□ 0.88
CCDC57-214ENST00000582040 CAMKK2Q96RR4 588 aa20.55■□□□□ 0.88
CCDC57-214ENST00000582040 PARD3Q8TEW0 1356 aa20.55■□□□□ 0.88
CCDC57-214ENST00000582040 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
CCDC57-214ENST00000582040 NUP188Q5SRE5 1749 aa20.54■□□□□ 0.88
CCDC57-214ENST00000582040 PEAK1Q9H792 1746 aa20.53■□□□□ 0.88
CCDC57-214ENST00000582040 ZNF692Q9BU19 519 aaPredicted RBP20.53■□□□□ 0.88
CCDC57-214ENST00000582040 NFAT5O94916 1531 aa20.53■□□□□ 0.88
CCDC57-214ENST00000582040 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
CCDC57-214ENST00000582040 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
CCDC57-214ENST00000582040 SOX12O15370 315 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms