RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
CSNK1D-220ENST00000581737 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
CSNK1D-220ENST00000581737 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
CSNK1D-220ENST00000581737 KRT27Q7Z3Y8 459 aa18.9■□□□□ 0.62
CSNK1D-220ENST00000581737 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
CSNK1D-220ENST00000581737 WASLO00401 505 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-220ENST00000581737 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-220ENST00000581737 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
CSNK1D-220ENST00000581737 SF3B2Q13435 895 aaKnown RBP18.88■□□□□ 0.61
CSNK1D-220ENST00000581737 EVC2Q86UK5 1308 aa18.88■□□□□ 0.61
CSNK1D-220ENST00000581737 KIF1AQ12756 1690 aa18.88■□□□□ 0.61
CSNK1D-220ENST00000581737 HAP1P54257 671 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-220ENST00000581737 EIF4G2P78344 907 aaKnown RBP eCLIP18.87■□□□□ 0.61
CSNK1D-220ENST00000581737 PLCH1Q4KWH8 1693 aa18.87■□□□□ 0.61
CSNK1D-220ENST00000581737 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
CSNK1D-220ENST00000581737 LRP5O75197 1615 aa18.86■□□□□ 0.61
CSNK1D-220ENST00000581737 ST20-MTHFSA0A0A6YYL1 179 aa18.86■□□□□ 0.61
CSNK1D-220ENST00000581737 FAM182BQ5T319 152 aa18.86■□□□□ 0.61
CSNK1D-220ENST00000581737 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
CSNK1D-220ENST00000581737 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-220ENST00000581737 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-220ENST00000581737 ABCA3Q99758 1704 aa18.84■□□□□ 0.61
CSNK1D-220ENST00000581737 PSME1Q06323 249 aa18.84■□□□□ 0.61
CSNK1D-220ENST00000581737 PMFBP1Q8TBY8 1022 aa18.84■□□□□ 0.61
CSNK1D-220ENST00000581737 CDK19Q9BWU1 502 aa18.84■□□□□ 0.61
CSNK1D-220ENST00000581737 ATP7BP35670 1465 aa18.84■□□□□ 0.61
CSNK1D-220ENST00000581737 SRPK2P78362 688 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-220ENST00000581737 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-220ENST00000581737 BTG4Q9NY30 223 aa18.82■□□□□ 0.6
CSNK1D-220ENST00000581737 NWD2Q9ULI1 1742 aa18.82■□□□□ 0.6
CSNK1D-220ENST00000581737 TOPAZ1Q8N9V7 1692 aa18.82■□□□□ 0.6
CSNK1D-220ENST00000581737 A0A0G2JS52 829 aa18.81■□□□□ 0.6
CSNK1D-220ENST00000581737 MYT1Q01538 1121 aa18.81■□□□□ 0.6
CSNK1D-220ENST00000581737 TESK2Q96S53 571 aa18.81■□□□□ 0.6
CSNK1D-220ENST00000581737 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
CSNK1D-220ENST00000581737 BAG6P46379 1132 aa18.8■□□□□ 0.6
CSNK1D-220ENST00000581737 TMF1P82094 1093 aa18.8■□□□□ 0.6
CSNK1D-220ENST00000581737 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
CSNK1D-220ENST00000581737 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-220ENST00000581737 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
CSNK1D-220ENST00000581737 NUDT16Q96DE0 195 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-220ENST00000581737 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-220ENST00000581737 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
CSNK1D-220ENST00000581737 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-220ENST00000581737 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
CSNK1D-220ENST00000581737 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
CSNK1D-220ENST00000581737 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
CSNK1D-220ENST00000581737 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
CSNK1D-220ENST00000581737 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
CSNK1D-220ENST00000581737 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
CSNK1D-220ENST00000581737 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-220ENST00000581737 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
CSNK1D-220ENST00000581737 PLEKHG3A1L390 1219 aa18.72■□□□□ 0.59
CSNK1D-220ENST00000581737 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
CSNK1D-220ENST00000581737 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-220ENST00000581737 NGDNQ8NEJ9 315 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-220ENST00000581737 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
CSNK1D-220ENST00000581737 THSD7AQ9UPZ6 1657 aa18.7■□□□□ 0.58
CSNK1D-220ENST00000581737 DISP2A7MBM2 1401 aa18.7■□□□□ 0.58
CSNK1D-220ENST00000581737 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-220ENST00000581737 CAMKK2Q96RR4 588 aa18.69■□□□□ 0.58
CSNK1D-220ENST00000581737 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-220ENST00000581737 CABP1Q9NZU7 370 aa18.68■□□□□ 0.58
CSNK1D-220ENST00000581737 RGPD1P0DJD0 1748 aa18.68■□□□□ 0.58
CSNK1D-220ENST00000581737 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
CSNK1D-220ENST00000581737 CRYBG1Q9Y4K1 1723 aa18.67■□□□□ 0.58
CSNK1D-220ENST00000581737 TRIM37O94972 964 aa18.67■□□□□ 0.58
CSNK1D-220ENST00000581737 CHRNA2Q15822 529 aa18.67■□□□□ 0.58
CSNK1D-220ENST00000581737 ACEP12821 1306 aa18.67■□□□□ 0.58
CSNK1D-220ENST00000581737 SPATA31A1Q5TZJ5 1347 aa18.67■□□□□ 0.58
CSNK1D-220ENST00000581737 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
CSNK1D-220ENST00000581737 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
CSNK1D-220ENST00000581737 PRDM11Q9NQV5 511 aa18.66■□□□□ 0.58
CSNK1D-220ENST00000581737 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
CSNK1D-220ENST00000581737 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
CSNK1D-220ENST00000581737 KIAA0232Q92628 1395 aa18.65■□□□□ 0.58
CSNK1D-220ENST00000581737 MYOM1P52179 1685 aa18.64■□□□□ 0.57
CSNK1D-220ENST00000581737 MON2Q7Z3U7 1717 aa18.64■□□□□ 0.57
CSNK1D-220ENST00000581737 HDGFL2Q7Z4V5 671 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-220ENST00000581737 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
CSNK1D-220ENST00000581737 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
CSNK1D-220ENST00000581737 USP6P35125 1406 aa18.63■□□□□ 0.57
CSNK1D-220ENST00000581737 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-220ENST00000581737 NUTM2GQ5VZR2 741 aa18.62■□□□□ 0.57
CSNK1D-220ENST00000581737 KTN1Q86UP2 1357 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 ANKRD36BQ8N2N9 1353 aa18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 APBA3O96018 575 aa18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 POLR3GLQ9BT43 218 aa18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
CSNK1D-220ENST00000581737 CD163L1Q9NR16 1453 aa18.6■□□□□ 0.57
CSNK1D-220ENST00000581737 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
CSNK1D-220ENST00000581737 NRKQ7Z2Y5 1582 aa18.59■□□□□ 0.57
CSNK1D-220ENST00000581737 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.57
CSNK1D-220ENST00000581737 A0A1W2PP64 1363 aa18.58■□□□□ 0.57
CSNK1D-220ENST00000581737 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
CSNK1D-220ENST00000581737 UTRNP46939 3433 aa18.58■□□□□ 0.56
CSNK1D-220ENST00000581737 LARP1Q6PKG0 1096 aaKnown RBP18.57■□□□□ 0.56
CSNK1D-220ENST00000581737 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 836.9 ms