RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
RIOK3-206ENST00000581339 S1PR4O95977 384 aa11.68□□□□□ -0.54
RIOK3-206ENST00000581339 JUNDP17535 347 aa11.68□□□□□ -0.54
RIOK3-206ENST00000581339 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
RIOK3-206ENST00000581339 TSC1Q92574 1164 aa11.68□□□□□ -0.54
RIOK3-206ENST00000581339 CUX1P39880 1505 aa11.68□□□□□ -0.54
RIOK3-206ENST00000581339 FGD5Q6ZNL6 1462 aa11.68□□□□□ -0.54
RIOK3-206ENST00000581339 GGCXP38435 758 aa11.67□□□□□ -0.54
RIOK3-206ENST00000581339 TMEM259Q4ZIN3 620 aa11.67□□□□□ -0.54
RIOK3-206ENST00000581339 DESI1Q6ICB0 168 aa11.67□□□□□ -0.54
RIOK3-206ENST00000581339 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
RIOK3-206ENST00000581339 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
RIOK3-206ENST00000581339 MMP16P51512 607 aa11.66□□□□□ -0.54
RIOK3-206ENST00000581339 AP1G2O75843 785 aa11.65□□□□□ -0.54
RIOK3-206ENST00000581339 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
RIOK3-206ENST00000581339 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
RIOK3-206ENST00000581339 PTPRNQ16849 979 aa11.61□□□□□ -0.55
RIOK3-206ENST00000581339 LYPD8Q6UX82 237 aa11.61□□□□□ -0.55
RIOK3-206ENST00000581339 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
RIOK3-206ENST00000581339 RNF223E7ERA6 249 aa11.6□□□□□ -0.55
RIOK3-206ENST00000581339 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
RIOK3-206ENST00000581339 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
RIOK3-206ENST00000581339 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
RIOK3-206ENST00000581339 A0A0G2JS52 829 aa11.59□□□□□ -0.55
RIOK3-206ENST00000581339 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
RIOK3-206ENST00000581339 USP17L8P0C7I0 530 aa11.59□□□□□ -0.55
RIOK3-206ENST00000581339 NUDT12Q9BQG2 462 aa11.59□□□□□ -0.55
RIOK3-206ENST00000581339 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
RIOK3-206ENST00000581339 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
RIOK3-206ENST00000581339 PER1O15534 1290 aaPredicted RBP11.58□□□□□ -0.56
RIOK3-206ENST00000581339 CCNYL3P0C7X3 344 aa11.58□□□□□ -0.56
RIOK3-206ENST00000581339 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
RIOK3-206ENST00000581339 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
RIOK3-206ENST00000581339 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
RIOK3-206ENST00000581339 ANKLE1Q8NAG6 615 aa11.57□□□□□ -0.56
RIOK3-206ENST00000581339 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
RIOK3-206ENST00000581339 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
RIOK3-206ENST00000581339 LRRN4Q8WUT4 740 aa11.55□□□□□ -0.56
RIOK3-206ENST00000581339 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
RIOK3-206ENST00000581339 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
RIOK3-206ENST00000581339 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
RIOK3-206ENST00000581339 PBRM1Q86U86 1689 aa11.53□□□□□ -0.56
RIOK3-206ENST00000581339 EVA1BQ9NVM1 165 aa11.53□□□□□ -0.56
RIOK3-206ENST00000581339 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
RIOK3-206ENST00000581339 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
RIOK3-206ENST00000581339 CTHP32929 405 aa11.52□□□□□ -0.57
RIOK3-206ENST00000581339 SNRKQ9NRH2 765 aa11.52□□□□□ -0.57
RIOK3-206ENST00000581339 ABCA5Q8WWZ7 1642 aa11.52□□□□□ -0.57
RIOK3-206ENST00000581339 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
RIOK3-206ENST00000581339 KCNH2Q12809 1159 aa11.51□□□□□ -0.57
RIOK3-206ENST00000581339 FLIIQ13045 1269 aa11.51□□□□□ -0.57
RIOK3-206ENST00000581339 MCM6Q14566 821 aa11.51□□□□□ -0.57
RIOK3-206ENST00000581339 MAP10Q9P2G4 905 aa11.51□□□□□ -0.57
RIOK3-206ENST00000581339 APBB1O00213 710 aa11.5□□□□□ -0.57
RIOK3-206ENST00000581339 SOCS7O14512 581 aa11.5□□□□□ -0.57
RIOK3-206ENST00000581339 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
RIOK3-206ENST00000581339 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
RIOK3-206ENST00000581339 PLA2G2CQ5R387 149 aa11.49□□□□□ -0.57
RIOK3-206ENST00000581339 ERCC6L2Q5T890 1561 aa11.47□□□□□ -0.57
RIOK3-206ENST00000581339 ZBTB24O43167 697 aaPredicted RBP11.47□□□□□ -0.57
RIOK3-206ENST00000581339 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
RIOK3-206ENST00000581339 NR6A1Q15406 480 aa11.46□□□□□ -0.57
RIOK3-206ENST00000581339 UNC93B1Q9H1C4 597 aa11.46□□□□□ -0.57
RIOK3-206ENST00000581339 RPIAP49247 311 aa11.45□□□□□ -0.58
RIOK3-206ENST00000581339 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
RIOK3-206ENST00000581339 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
RIOK3-206ENST00000581339 GRIN2AQ12879 1464 aa11.44□□□□□ -0.58
RIOK3-206ENST00000581339 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
RIOK3-206ENST00000581339 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
RIOK3-206ENST00000581339 TOP2BQ02880 1626 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 ADAMTS12P58397 1594 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 SLC19A1P41440 591 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 LIAT1Q6ZQX7 453 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 ARMC2Q8NEN0 867 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 EPS8L1Q8TE68 723 aa11.43□□□□□ -0.58
RIOK3-206ENST00000581339 TRIM32Q13049 653 aa11.42□□□□□ -0.58
RIOK3-206ENST00000581339 EMID1Q96A84 441 aaPredicted RBP11.42□□□□□ -0.58
RIOK3-206ENST00000581339 PRKD2Q9BZL6 878 aa11.42□□□□□ -0.58
RIOK3-206ENST00000581339 PRM3Q9NNZ6 103 aa11.42□□□□□ -0.58
RIOK3-206ENST00000581339 FKBPLQ9UIM3 349 aa11.41□□□□□ -0.58
RIOK3-206ENST00000581339 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
RIOK3-206ENST00000581339 NUP160Q12769 1436 aa11.41□□□□□ -0.58
RIOK3-206ENST00000581339 CD2BP2O95400 341 aaKnown RBP11.4□□□□□ -0.58
RIOK3-206ENST00000581339 V9GY48 417 aaPredicted RBP11.4□□□□□ -0.58
RIOK3-206ENST00000581339 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
RIOK3-206ENST00000581339 RGS20O76081 388 aa11.39□□□□□ -0.59
RIOK3-206ENST00000581339 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
RIOK3-206ENST00000581339 NBPF14Q5TI25 921 aa11.39□□□□□ -0.59
RIOK3-206ENST00000581339 FHAD1B1AJZ9 1412 aa11.38□□□□□ -0.59
RIOK3-206ENST00000581339 BAP1Q92560 729 aa11.38□□□□□ -0.59
RIOK3-206ENST00000581339 LINC01559Q495D7 138 aa11.37□□□□□ -0.59
RIOK3-206ENST00000581339 SPRYD7Q5W111 196 aa11.37□□□□□ -0.59
RIOK3-206ENST00000581339 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.594e-6■□□□□ 10.4
RIOK3-206ENST00000581339 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
RIOK3-206ENST00000581339 SHROOM2Q13796 1616 aa11.36□□□□□ -0.59
RIOK3-206ENST00000581339 RAD21O60216 631 aa11.36□□□□□ -0.59
RIOK3-206ENST00000581339 WNT7BP56706 349 aa11.36□□□□□ -0.59
RIOK3-206ENST00000581339 ZNF511Q8NB15 262 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms