RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-218ENST00000580745 PLEKHG3A1L390 1219 aa16.04■□□□□ 0.16
PPP4R1-218ENST00000580745 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-218ENST00000580745 MARF1Q9Y4F3 1742 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-218ENST00000580745 POLR3AO14802 1390 aaPredicted RBP16.03■□□□□ 0.16
PPP4R1-218ENST00000580745 A0A0G2JS52 829 aa16.03■□□□□ 0.16
PPP4R1-218ENST00000580745 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
PPP4R1-218ENST00000580745 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-218ENST00000580745 MYT1Q01538 1121 aa16.03■□□□□ 0.16
PPP4R1-218ENST00000580745 PRDM11Q9NQV5 511 aa16.03■□□□□ 0.16
PPP4R1-218ENST00000580745 KIAA0232Q92628 1395 aa16.02■□□□□ 0.16
PPP4R1-218ENST00000580745 ABCA3Q99758 1704 aa16.01■□□□□ 0.15
PPP4R1-218ENST00000580745 ALS2Q96Q42 1657 aa16.01■□□□□ 0.15
PPP4R1-218ENST00000580745 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
PPP4R1-218ENST00000580745 FAM182BQ5T319 152 aa16■□□□□ 0.15
PPP4R1-218ENST00000580745 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
PPP4R1-218ENST00000580745 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
PPP4R1-218ENST00000580745 CABP1Q9NZU7 370 aa16■□□□□ 0.15
PPP4R1-218ENST00000580745 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
PPP4R1-218ENST00000580745 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
PPP4R1-218ENST00000580745 STRN4Q9NRL3 753 aa15.99■□□□□ 0.15
PPP4R1-218ENST00000580745 PLCH1Q4KWH8 1693 aa15.99■□□□□ 0.15
PPP4R1-218ENST00000580745 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
PPP4R1-218ENST00000580745 SPATA31A7Q8IWB4 1347 aa15.98■□□□□ 0.15
PPP4R1-218ENST00000580745 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
PPP4R1-218ENST00000580745 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
PPP4R1-218ENST00000580745 ROCK2O75116 1388 aaKnown RBP15.97■□□□□ 0.15
PPP4R1-218ENST00000580745 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
PPP4R1-218ENST00000580745 USP35Q9P2H5 1018 aa15.95■□□□□ 0.14
PPP4R1-218ENST00000580745 USP19O94966 1318 aa15.94■□□□□ 0.14
PPP4R1-218ENST00000580745 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
PPP4R1-218ENST00000580745 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
PPP4R1-218ENST00000580745 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
PPP4R1-218ENST00000580745 NWD2Q9ULI1 1742 aa15.94■□□□□ 0.14
PPP4R1-218ENST00000580745 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
PPP4R1-218ENST00000580745 COL14A1Q05707 1796 aaKnown RBP15.93■□□□□ 0.14
PPP4R1-218ENST00000580745 ZBTB7CA1YPR0 619 aa15.93■□□□□ 0.14
PPP4R1-218ENST00000580745 GCP02774 474 aa15.93■□□□□ 0.14
PPP4R1-218ENST00000580745 LARP1Q6PKG0 1096 aaKnown RBP15.93■□□□□ 0.14
PPP4R1-218ENST00000580745 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
PPP4R1-218ENST00000580745 CRYBG1Q9Y4K1 1723 aa15.92■□□□□ 0.14
PPP4R1-218ENST00000580745 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
PPP4R1-218ENST00000580745 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
PPP4R1-218ENST00000580745 EP400Q96L91 3159 aa15.92■□□□□ 0.14
PPP4R1-218ENST00000580745 EVA1CP58658 441 aa15.91■□□□□ 0.14
PPP4R1-218ENST00000580745 NLRP6P59044 892 aa15.91■□□□□ 0.14
PPP4R1-218ENST00000580745 USP6P35125 1406 aa15.91■□□□□ 0.14
PPP4R1-218ENST00000580745 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
PPP4R1-218ENST00000580745 TRPM1Q7Z4N2 1603 aa15.9■□□□□ 0.14
PPP4R1-218ENST00000580745 SSH2Q76I76 1423 aa15.89■□□□□ 0.13
PPP4R1-218ENST00000580745 BRWD3Q6RI45 1802 aa15.89■□□□□ 0.13
PPP4R1-218ENST00000580745 CAMTA1Q9Y6Y1 1673 aa15.89■□□□□ 0.13
PPP4R1-218ENST00000580745 CPDO75976 1380 aa15.88■□□□□ 0.13
PPP4R1-218ENST00000580745 NRKQ7Z2Y5 1582 aa15.88■□□□□ 0.13
PPP4R1-218ENST00000580745 PHRF1Q9P1Y6 1649 aaKnown RBP15.88■□□□□ 0.13
PPP4R1-218ENST00000580745 CARD11Q9BXL7 1154 aa15.88■□□□□ 0.13
PPP4R1-218ENST00000580745 QRICH2Q9H0J4 1663 aa15.88■□□□□ 0.13
PPP4R1-218ENST00000580745 SOX12O15370 315 aa15.87■□□□□ 0.13
PPP4R1-218ENST00000580745 EN1Q05925 392 aaPredicted RBP15.87■□□□□ 0.13
PPP4R1-218ENST00000580745 TTC21BQ7Z4L5 1316 aa15.87■□□□□ 0.13
PPP4R1-218ENST00000580745 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
PPP4R1-218ENST00000580745 BAG6P46379 1132 aa15.85■□□□□ 0.13
PPP4R1-218ENST00000580745 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
PPP4R1-218ENST00000580745 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
PPP4R1-218ENST00000580745 THSD7AQ9UPZ6 1657 aa15.84■□□□□ 0.13
PPP4R1-218ENST00000580745 PSDA5PKW4 1024 aaPredicted RBP15.84■□□□□ 0.13
PPP4R1-218ENST00000580745 TRIM37O94972 964 aa15.84■□□□□ 0.13
PPP4R1-218ENST00000580745 BARGINQ6ZT62 677 aa15.84■□□□□ 0.13
PPP4R1-218ENST00000580745 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
PPP4R1-218ENST00000580745 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
PPP4R1-218ENST00000580745 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
PPP4R1-218ENST00000580745 COL5A2P05997 1499 aaPredicted RBP15.83■□□□□ 0.12
PPP4R1-218ENST00000580745 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
PPP4R1-218ENST00000580745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.82■□□□□ 0.121e-7■■□□□ 14.3
PPP4R1-218ENST00000580745 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
PPP4R1-218ENST00000580745 SLIT3O75094 1523 aa15.81■□□□□ 0.12
PPP4R1-218ENST00000580745 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
PPP4R1-218ENST00000580745 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
PPP4R1-218ENST00000580745 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
PPP4R1-218ENST00000580745 TMC1Q8TDI8 760 aa15.81■□□□□ 0.12
PPP4R1-218ENST00000580745 LMO7Q8WWI1 1683 aa15.8■□□□□ 0.12
PPP4R1-218ENST00000580745 SRCAPQ6ZRS2 3230 aa15.8■□□□□ 0.12
PPP4R1-218ENST00000580745 FAM196AQ6ZSG2 479 aa15.8■□□□□ 0.12
PPP4R1-218ENST00000580745 ARHGEF25Q86VW2 580 aa15.8■□□□□ 0.12
PPP4R1-218ENST00000580745 SLC12A5Q9H2X9 1139 aa15.8■□□□□ 0.12
PPP4R1-218ENST00000580745 TOM1L2Q6ZVM7 507 aa15.79■□□□□ 0.12
PPP4R1-218ENST00000580745 NME9Q86XW9 330 aa15.79■□□□□ 0.12
PPP4R1-218ENST00000580745 SBNO2Q9Y2G9 1366 aa15.78■□□□□ 0.12
PPP4R1-218ENST00000580745 TTC21AQ8NDW8 1320 aa15.78■□□□□ 0.12
PPP4R1-218ENST00000580745 APBA3O96018 575 aa15.78■□□□□ 0.12
PPP4R1-218ENST00000580745 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
PPP4R1-218ENST00000580745 CRB1P82279 1406 aa15.77■□□□□ 0.12
PPP4R1-218ENST00000580745 CAMKK2Q96RR4 588 aa15.77■□□□□ 0.12
PPP4R1-218ENST00000580745 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
PPP4R1-218ENST00000580745 CD163L1Q9NR16 1453 aa15.77■□□□□ 0.11
PPP4R1-218ENST00000580745 ST20-MTHFSA0A0A6YYL1 179 aa15.76■□□□□ 0.11
PPP4R1-218ENST00000580745 R3HDM1Q15032 1099 aaKnown RBP15.76■□□□□ 0.11
PPP4R1-218ENST00000580745 KCNH5Q8NCM2 988 aa15.76■□□□□ 0.11
PPP4R1-218ENST00000580745 TESK2Q96S53 571 aa15.76■□□□□ 0.11
PPP4R1-218ENST00000580745 WDR17Q8IZU2 1322 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms