RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 SHPRHQ149N8 1683 aa22.62■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 BLMP54132 1417 aaPredicted RBP22.62■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 DCCP43146 1447 aa22.6■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 MTHFSP49914 203 aa22.59■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 C19orf44Q9H6X5 657 aa22.59■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 OVOS2A0A0J9YW53 1432 aa22.59■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 OVOS2Q6IE36 1432 aa22.59■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 ZRANB1Q9UGI0 708 aa22.59■■□□□ 1.21
CCDC144NL-AS1-213ENST00000580278 NGDNQ8NEJ9 315 aaKnown RBP22.57■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 COL3A1P02461 1466 aaPredicted RBP22.57■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 PIK3C2AO00443 1686 aa22.56■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 LRRC7Q96NW7 1537 aa22.55■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 AATKQ6ZMQ8 1374 aa22.55■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 C1orf167Q5SNV9 1468 aa22.55■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 SMG6Q86US8 1419 aaKnown RBP22.55■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 PNPLA6Q8IY17 1366 aa22.54■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 MST1RQ04912 1400 aa22.54■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 FBLN1P23142 703 aa22.53■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 WDR43Q15061 677 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 COG3Q96JB2 828 aa22.53■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 ORAI2Q96SN7 254 aa22.53■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 MAP2P11137 1827 aaKnown RBP22.53■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 USP31Q70CQ4 1352 aa22.52■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 MARF1Q9Y4F3 1742 aaKnown RBP22.52■■□□□ 1.2
CCDC144NL-AS1-213ENST00000580278 KIF1AQ12756 1690 aa22.51■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 ESCO1Q5FWF5 840 aa22.51■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 POLKQ9UBT6 870 aa22.51■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 CFAP53Q96M91 514 aa22.5■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 DMRT2Q9Y5R5 561 aa22.49■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 MSH6P52701 1360 aa22.47■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 ATF3P18847 181 aa22.46■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 CADPS2Q86UW7 1296 aa22.45■■□□□ 1.19
CCDC144NL-AS1-213ENST00000580278 TRPM3Q9HCF6 1732 aaPredicted RBP22.45■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 XPCQ01831 940 aaPredicted RBP22.44■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 EMILIN1Q9Y6C2 1016 aa22.44■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 FOXO3O43524 673 aa22.42■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 DDX17Q92841 729 aaKnown RBP22.42■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 PEAK1Q9H792 1746 aa22.42■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 RRS1Q15050 365 aaKnown RBP22.41■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 NUTM2GQ5VZR2 741 aa22.41■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 PSME1Q06323 249 aa22.4■■□□□ 1.18
CCDC144NL-AS1-213ENST00000580278 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 NLRP6P59044 892 aa22.38■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 IQSEC2Q5JU85 1478 aa22.38■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 DIAPH1O60610 1272 aaKnown RBP22.38■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 CCDC146Q8IYE0 955 aa22.38■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 ABTB2Q8N961 1025 aa22.38■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 PPM1GO15355 546 aaPredicted RBP22.36■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 SOX12O15370 315 aa22.36■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 NUDCQ9Y266 331 aa22.36■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 IL13P35225 146 aa22.35■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 NFAT5O94916 1531 aa22.35■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 LTBP4Q8N2S1 1624 aa22.34■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 U2AF1L5P0DN76 240 aaPredicted RBP22.34■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 U2AF1Q01081 240 aaKnown RBP eCLIP22.34■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 MAP3K19Q56UN5 1328 aa22.34■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 KRT28Q7Z3Y7 464 aa22.34■■□□□ 1.17
CCDC144NL-AS1-213ENST00000580278 APAF1O14727 1248 aa22.33■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 RUNDC1Q96C34 613 aa22.33■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 SLIT3O75094 1523 aa22.32■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 PLEKHG5O94827 1062 aa22.32■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 PXDNQ92626 1479 aa22.32■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 SBNO1A3KN83 1393 aa22.32■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 U2SURPO15042 1029 aaKnown RBP22.31■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 PDE3BQ13370 1112 aa22.31■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 BRINP3Q76B58 766 aa22.31■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 NGEFQ8N5V2 710 aa22.3■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 NPHP3Q7Z494 1330 aa22.3■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 FLT4P35916 1363 aa22.3■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 RGPD1P0DJD0 1748 aa22.3■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 PHRF1Q9P1Y6 1649 aaKnown RBP22.29■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 USP19O94966 1318 aa22.29■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 LTN1O94822 1766 aa22.28■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 EIF4A2Q14240 407 aaKnown RBP22.27■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 PHF23Q9BUL5 403 aaPredicted RBP22.27■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
CCDC144NL-AS1-213ENST00000580278 HSP90AB2PQ58FF8 381 aa22.27■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 TCP11L2Q8N4U5 519 aa22.27■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 RSPH6AQ9H0K4 717 aa22.27■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 FCHSD2O94868 740 aa22.26■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 NCBP3Q53F19 620 aaKnown RBP22.26■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 LMOD2Q6P5Q4 547 aa22.26■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
CCDC144NL-AS1-213ENST00000580278 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms