RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 ARHGEF10O15013 1369 aa19.4■□□□□ 0.7
CSNK1D-208ENST00000578501 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.7
CSNK1D-208ENST00000578501 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
CSNK1D-208ENST00000578501 EVC2Q86UK5 1308 aa19.39■□□□□ 0.69
CSNK1D-208ENST00000578501 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
CSNK1D-208ENST00000578501 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.38■□□□□ 0.69
CSNK1D-208ENST00000578501 SBNO2Q9Y2G9 1366 aa19.38■□□□□ 0.69
CSNK1D-208ENST00000578501 TOPAZ1Q8N9V7 1692 aa19.37■□□□□ 0.69
CSNK1D-208ENST00000578501 SLIT2O94813 1529 aa19.37■□□□□ 0.69
CSNK1D-208ENST00000578501 SEPT12Q8IYM1 358 aa19.37■□□□□ 0.69
CSNK1D-208ENST00000578501 CABP2Q9NPB3 220 aa19.37■□□□□ 0.69
CSNK1D-208ENST00000578501 TRPM3Q9HCF6 1732 aaPredicted RBP19.37■□□□□ 0.69
CSNK1D-208ENST00000578501 LRP5O75197 1615 aa19.36■□□□□ 0.69
CSNK1D-208ENST00000578501 EP400Q96L91 3159 aa19.36■□□□□ 0.69
CSNK1D-208ENST00000578501 ACEP12821 1306 aa19.35■□□□□ 0.69
CSNK1D-208ENST00000578501 VPS72Q15906 364 aa19.34■□□□□ 0.69
CSNK1D-208ENST00000578501 GLI3P10071 1580 aa19.34■□□□□ 0.69
CSNK1D-208ENST00000578501 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
CSNK1D-208ENST00000578501 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.68
CSNK1D-208ENST00000578501 BAG6P46379 1132 aa19.33■□□□□ 0.68
CSNK1D-208ENST00000578501 HAP1P54257 671 aaPredicted RBP19.33■□□□□ 0.68
CSNK1D-208ENST00000578501 LMOD2Q6P5Q4 547 aa19.33■□□□□ 0.68
CSNK1D-208ENST00000578501 KRT27Q7Z3Y8 459 aa19.32■□□□□ 0.68
CSNK1D-208ENST00000578501 ALS2Q96Q42 1657 aa19.32■□□□□ 0.68
CSNK1D-208ENST00000578501 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
CSNK1D-208ENST00000578501 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
CSNK1D-208ENST00000578501 PAK3O75914 559 aaPredicted RBP19.3■□□□□ 0.68
CSNK1D-208ENST00000578501 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
CSNK1D-208ENST00000578501 BRD4O60885 1362 aaPredicted RBP19.3■□□□□ 0.68
CSNK1D-208ENST00000578501 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
CSNK1D-208ENST00000578501 CABLES1Q8TDN4 633 aa19.29■□□□□ 0.68
CSNK1D-208ENST00000578501 PUS7Q96PZ0 661 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-208ENST00000578501 BRWD3Q6RI45 1802 aa19.27■□□□□ 0.68
CSNK1D-208ENST00000578501 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-208ENST00000578501 ABCA3Q99758 1704 aa19.25■□□□□ 0.67
CSNK1D-208ENST00000578501 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
CSNK1D-208ENST00000578501 TESK2Q96S53 571 aa19.25■□□□□ 0.67
CSNK1D-208ENST00000578501 ZNF692Q9BU19 519 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-208ENST00000578501 A0A0G2JS52 829 aa19.24■□□□□ 0.67
CSNK1D-208ENST00000578501 MYT1Q01538 1121 aa19.24■□□□□ 0.67
CSNK1D-208ENST00000578501 USP6P35125 1406 aa19.24■□□□□ 0.67
CSNK1D-208ENST00000578501 ABTB2Q8N961 1025 aa19.23■□□□□ 0.67
CSNK1D-208ENST00000578501 SSH2Q76I76 1423 aa19.22■□□□□ 0.67
CSNK1D-208ENST00000578501 USP47Q96K76 1375 aa19.21■□□□□ 0.67
CSNK1D-208ENST00000578501 FAM83GA6ND36 823 aa19.21■□□□□ 0.67
CSNK1D-208ENST00000578501 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
CSNK1D-208ENST00000578501 CPSF1Q10570 1443 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-208ENST00000578501 NWD2Q9ULI1 1742 aa19.21■□□□□ 0.67
CSNK1D-208ENST00000578501 CRYBG1Q9Y4K1 1723 aa19.21■□□□□ 0.67
CSNK1D-208ENST00000578501 NLRP13Q86W25 1043 aa19.19■□□□□ 0.66
CSNK1D-208ENST00000578501 USP19O94966 1318 aa19.19■□□□□ 0.66
CSNK1D-208ENST00000578501 EN1Q05925 392 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-208ENST00000578501 FAM98CQ17RN3 349 aaKnown RBP19.17■□□□□ 0.66
CSNK1D-208ENST00000578501 NUTM2GQ5VZR2 741 aa19.17■□□□□ 0.66
CSNK1D-208ENST00000578501 R3HDM1Q15032 1099 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 PLCH1Q4KWH8 1693 aa19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 TTC21AQ8NDW8 1320 aa19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 NINLQ9Y2I6 1382 aa19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 AKAP12Q02952 1782 aa19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 COL14A1Q05707 1796 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-208ENST00000578501 PHRF1Q9P1Y6 1649 aaKnown RBP19.15■□□□□ 0.66
CSNK1D-208ENST00000578501 TMF1P82094 1093 aa19.15■□□□□ 0.66
CSNK1D-208ENST00000578501 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
CSNK1D-208ENST00000578501 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
CSNK1D-208ENST00000578501 NLRP6P59044 892 aa19.14■□□□□ 0.65
CSNK1D-208ENST00000578501 TMC1Q8TDI8 760 aa19.14■□□□□ 0.65
CSNK1D-208ENST00000578501 SLC12A5Q9H2X9 1139 aa19.14■□□□□ 0.65
CSNK1D-208ENST00000578501 CPDO75976 1380 aa19.14■□□□□ 0.65
CSNK1D-208ENST00000578501 KIAA0232Q92628 1395 aa19.14■□□□□ 0.65
CSNK1D-208ENST00000578501 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
CSNK1D-208ENST00000578501 GCP02774 474 aa19.13■□□□□ 0.65
CSNK1D-208ENST00000578501 HDGFL2Q7Z4V5 671 aaPredicted RBP19.13■□□□□ 0.65
CSNK1D-208ENST00000578501 BTG4Q9NY30 223 aa19.13■□□□□ 0.65
CSNK1D-208ENST00000578501 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
CSNK1D-208ENST00000578501 DISP2A7MBM2 1401 aa19.13■□□□□ 0.65
CSNK1D-208ENST00000578501 NRKQ7Z2Y5 1582 aa19.12■□□□□ 0.65
CSNK1D-208ENST00000578501 RGPD1P0DJD0 1748 aa19.11■□□□□ 0.65
CSNK1D-208ENST00000578501 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
CSNK1D-208ENST00000578501 CDCA8Q53HL2 280 aa19.11■□□□□ 0.65
CSNK1D-208ENST00000578501 MON2Q7Z3U7 1717 aa19.11■□□□□ 0.65
CSNK1D-208ENST00000578501 PIK3C2AO00443 1686 aa19.11■□□□□ 0.65
CSNK1D-208ENST00000578501 YY1P25490 414 aa19.1■□□□□ 0.65
CSNK1D-208ENST00000578501 NRAPQ86VF7 1730 aa19.1■□□□□ 0.65
CSNK1D-208ENST00000578501 SLIT3O75094 1523 aa19.1■□□□□ 0.65
CSNK1D-208ENST00000578501 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.65
CSNK1D-208ENST00000578501 A0A1W2PP64 1363 aa19.08■□□□□ 0.65
CSNK1D-208ENST00000578501 SPATA31A5Q5VU36 1347 aa19.08■□□□□ 0.65
CSNK1D-208ENST00000578501 SPATA31A7Q8IWB4 1347 aa19.08■□□□□ 0.65
CSNK1D-208ENST00000578501 CHRNA2Q15822 529 aa19.08■□□□□ 0.64
CSNK1D-208ENST00000578501 USP31Q70CQ4 1352 aa19.07■□□□□ 0.64
CSNK1D-208ENST00000578501 EZH2Q15910 746 aaKnown RBP19.07■□□□□ 0.64
CSNK1D-208ENST00000578501 FAM196AQ6ZSG2 479 aa19.07■□□□□ 0.64
CSNK1D-208ENST00000578501 KCNH5Q8NCM2 988 aa19.07■□□□□ 0.64
CSNK1D-208ENST00000578501 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
CSNK1D-208ENST00000578501 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
CSNK1D-208ENST00000578501 FAM182BQ5T319 152 aa19.06■□□□□ 0.64
CSNK1D-208ENST00000578501 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
CSNK1D-208ENST00000578501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.642e-7■■□□□ 13.2
CSNK1D-208ENST00000578501 CAMKK2Q96RR4 588 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms