RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 DCCP43146 1447 aa17.82■□□□□ 0.44
CTC1-203ENST00000578240 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
CTC1-203ENST00000578240 ACEP12821 1306 aa17.81■□□□□ 0.44
CTC1-203ENST00000578240 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
CTC1-203ENST00000578240 FYB1O15117 783 aa17.8■□□□□ 0.44
CTC1-203ENST00000578240 PROSER2Q86WR7 435 aaPredicted RBP17.8■□□□□ 0.44
CTC1-203ENST00000578240 MST1RQ04912 1400 aa17.8■□□□□ 0.44
CTC1-203ENST00000578240 OVOS2A0A0J9YW53 1432 aa17.78■□□□□ 0.44
CTC1-203ENST00000578240 OVOS2Q6IE36 1432 aa17.78■□□□□ 0.44
CTC1-203ENST00000578240 COL3A1P02461 1466 aaPredicted RBP17.78■□□□□ 0.44
CTC1-203ENST00000578240 PNISRQ8TF01 805 aaKnown RBP17.77■□□□□ 0.44
CTC1-203ENST00000578240 GGNBP2Q9H3C7 697 aa17.77■□□□□ 0.44
CTC1-203ENST00000578240 C1orf167Q5SNV9 1468 aa17.77■□□□□ 0.44
CTC1-203ENST00000578240 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
CTC1-203ENST00000578240 PEAK1Q9H792 1746 aa17.77■□□□□ 0.43
CTC1-203ENST00000578240 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
CTC1-203ENST00000578240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTC1-203ENST00000578240 LTN1O94822 1766 aa17.75■□□□□ 0.43
CTC1-203ENST00000578240 MORC1Q86VD1 984 aa17.74■□□□□ 0.43
CTC1-203ENST00000578240 NME9Q86XW9 330 aa17.74■□□□□ 0.43
CTC1-203ENST00000578240 SMG6Q86US8 1419 aaKnown RBP17.74■□□□□ 0.43
CTC1-203ENST00000578240 CRYBG1Q9Y4K1 1723 aa17.73■□□□□ 0.43
CTC1-203ENST00000578240 TTC21BQ7Z4L5 1316 aa17.73■□□□□ 0.43
CTC1-203ENST00000578240 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
CTC1-203ENST00000578240 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
CTC1-203ENST00000578240 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
CTC1-203ENST00000578240 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
CTC1-203ENST00000578240 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
CTC1-203ENST00000578240 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
CTC1-203ENST00000578240 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.43
CTC1-203ENST00000578240 HSPA1LP34931 641 aa17.71■□□□□ 0.42
CTC1-203ENST00000578240 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.42
CTC1-203ENST00000578240 NHSL1Q5SYE7 1610 aa17.7■□□□□ 0.42
CTC1-203ENST00000578240 ORAI2Q96SN7 254 aa17.69■□□□□ 0.42
CTC1-203ENST00000578240 MSH6P52701 1360 aa17.69■□□□□ 0.42
CTC1-203ENST00000578240 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
CTC1-203ENST00000578240 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
CTC1-203ENST00000578240 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
CTC1-203ENST00000578240 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
CTC1-203ENST00000578240 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
CTC1-203ENST00000578240 INSRP06213 1382 aa17.67■□□□□ 0.42
CTC1-203ENST00000578240 RGPD1P0DJD0 1748 aa17.67■□□□□ 0.42
CTC1-203ENST00000578240 NFAT5O94916 1531 aa17.66■□□□□ 0.42
CTC1-203ENST00000578240 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
CTC1-203ENST00000578240 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
CTC1-203ENST00000578240 ABCA3Q99758 1704 aa17.66■□□□□ 0.42
CTC1-203ENST00000578240 PXDNQ92626 1479 aa17.65■□□□□ 0.42
CTC1-203ENST00000578240 FBLN1P23142 703 aa17.65■□□□□ 0.42
CTC1-203ENST00000578240 MTHFSP49914 203 aa17.65■□□□□ 0.42
CTC1-203ENST00000578240 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
CTC1-203ENST00000578240 SLIT3O75094 1523 aa17.64■□□□□ 0.41
CTC1-203ENST00000578240 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
CTC1-203ENST00000578240 RGPD5Q99666 1765 aa17.62■□□□□ 0.41
CTC1-203ENST00000578240 ATF3P18847 181 aa17.62■□□□□ 0.41
CTC1-203ENST00000578240 COG3Q96JB2 828 aa17.62■□□□□ 0.41
CTC1-203ENST00000578240 MED1Q15648 1581 aaPredicted RBP17.62■□□□□ 0.41
CTC1-203ENST00000578240 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
CTC1-203ENST00000578240 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
CTC1-203ENST00000578240 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
CTC1-203ENST00000578240 RGPD2P0DJD1 1756 aa17.6■□□□□ 0.41
CTC1-203ENST00000578240 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
CTC1-203ENST00000578240 EMILIN1Q9Y6C2 1016 aa17.6■□□□□ 0.41
CTC1-203ENST00000578240 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
CTC1-203ENST00000578240 FOXO3O43524 673 aa17.59■□□□□ 0.41
CTC1-203ENST00000578240 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
CTC1-203ENST00000578240 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
CTC1-203ENST00000578240 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.41
CTC1-203ENST00000578240 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
CTC1-203ENST00000578240 SENP3-EIF4A1A0A087X0R7 540 aa17.56■□□□□ 0.4
CTC1-203ENST00000578240 DDX17Q92841 729 aaKnown RBP17.56■□□□□ 0.4
CTC1-203ENST00000578240 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
CTC1-203ENST00000578240 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
CTC1-203ENST00000578240 COL18A1P39060 1754 aa17.55■□□□□ 0.4
CTC1-203ENST00000578240 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTC1-203ENST00000578240 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
CTC1-203ENST00000578240 ILDR2Q71H61 639 aa17.55■□□□□ 0.4
CTC1-203ENST00000578240 TNS3Q68CZ2 1445 aa17.54■□□□□ 0.4
CTC1-203ENST00000578240 PSME1Q06323 249 aa17.54■□□□□ 0.4
CTC1-203ENST00000578240 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
CTC1-203ENST00000578240 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
CTC1-203ENST00000578240 NLRP6P59044 892 aa17.53■□□□□ 0.4
CTC1-203ENST00000578240 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
CTC1-203ENST00000578240 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
CTC1-203ENST00000578240 USP19O94966 1318 aa17.53■□□□□ 0.4
CTC1-203ENST00000578240 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
CTC1-203ENST00000578240 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
CTC1-203ENST00000578240 CAMTA1Q9Y6Y1 1673 aa17.52■□□□□ 0.4
CTC1-203ENST00000578240 MAP3K19Q56UN5 1328 aa17.52■□□□□ 0.4
CTC1-203ENST00000578240 NPHP3Q7Z494 1330 aa17.51■□□□□ 0.39
CTC1-203ENST00000578240 SOCS7O14512 581 aa17.51■□□□□ 0.39
CTC1-203ENST00000578240 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
CTC1-203ENST00000578240 PHLPP1O60346 1717 aa17.5■□□□□ 0.39
CTC1-203ENST00000578240 SOX12O15370 315 aa17.49■□□□□ 0.39
CTC1-203ENST00000578240 FLT4P35916 1363 aa17.49■□□□□ 0.39
CTC1-203ENST00000578240 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
CTC1-203ENST00000578240 COL16A1Q07092 1604 aaPredicted RBP17.48■□□□□ 0.39
CTC1-203ENST00000578240 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
CTC1-203ENST00000578240 IL13P35225 146 aa17.48■□□□□ 0.39
CTC1-203ENST00000578240 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
CTC1-203ENST00000578240 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms