RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ARHGEF28Q8N1W1 1705 aaKnown RBP18.28■□□□□ 0.52
SMARCD2-207ENST00000578234 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
SMARCD2-207ENST00000578234 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
SMARCD2-207ENST00000578234 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
SMARCD2-207ENST00000578234 KRT27Q7Z3Y8 459 aa18.25■□□□□ 0.51
SMARCD2-207ENST00000578234 ATP7BP35670 1465 aa18.25■□□□□ 0.51
SMARCD2-207ENST00000578234 COL14A1Q05707 1796 aaKnown RBP18.25■□□□□ 0.51
SMARCD2-207ENST00000578234 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
SMARCD2-207ENST00000578234 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
SMARCD2-207ENST00000578234 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
SMARCD2-207ENST00000578234 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
SMARCD2-207ENST00000578234 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-207ENST00000578234 CCDC61Q9Y6R9 512 aa18.22■□□□□ 0.51
SMARCD2-207ENST00000578234 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
SMARCD2-207ENST00000578234 SPATA31A5Q5VU36 1347 aa18.21■□□□□ 0.51
SMARCD2-207ENST00000578234 SPATA31A7Q8IWB4 1347 aa18.21■□□□□ 0.51
SMARCD2-207ENST00000578234 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
SMARCD2-207ENST00000578234 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
SMARCD2-207ENST00000578234 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
SMARCD2-207ENST00000578234 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
SMARCD2-207ENST00000578234 NBPF8Q3BBV2 869 aa18.19■□□□□ 0.5
SMARCD2-207ENST00000578234 NUTM2GQ5VZR2 741 aa18.19■□□□□ 0.5
SMARCD2-207ENST00000578234 ACEP12821 1306 aa18.19■□□□□ 0.5
SMARCD2-207ENST00000578234 FAM182BQ5T319 152 aa18.18■□□□□ 0.5
SMARCD2-207ENST00000578234 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
SMARCD2-207ENST00000578234 BAG6P46379 1132 aa18.17■□□□□ 0.5
SMARCD2-207ENST00000578234 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
SMARCD2-207ENST00000578234 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
SMARCD2-207ENST00000578234 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
SMARCD2-207ENST00000578234 PHRF1Q9P1Y6 1649 aaKnown RBP18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 EVA1CP58658 441 aa18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 SPATA31A1Q5TZJ5 1347 aa18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
SMARCD2-207ENST00000578234 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
SMARCD2-207ENST00000578234 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
SMARCD2-207ENST00000578234 ZBTB7CA1YPR0 619 aa18.12■□□□□ 0.49
SMARCD2-207ENST00000578234 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
SMARCD2-207ENST00000578234 EN1Q05925 392 aaPredicted RBP18.11■□□□□ 0.49
SMARCD2-207ENST00000578234 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
SMARCD2-207ENST00000578234 BRD4O60885 1362 aaPredicted RBP18.1■□□□□ 0.49
SMARCD2-207ENST00000578234 USP19O94966 1318 aa18.1■□□□□ 0.49
SMARCD2-207ENST00000578234 NLRP13Q86W25 1043 aa18.1■□□□□ 0.49
SMARCD2-207ENST00000578234 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
SMARCD2-207ENST00000578234 CPDO75976 1380 aa18.09■□□□□ 0.49
SMARCD2-207ENST00000578234 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
SMARCD2-207ENST00000578234 RGPD1P0DJD0 1748 aa18.07■□□□□ 0.48
SMARCD2-207ENST00000578234 GCP02774 474 aa18.07■□□□□ 0.48
SMARCD2-207ENST00000578234 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
SMARCD2-207ENST00000578234 BARGINQ6ZT62 677 aa18.07■□□□□ 0.48
SMARCD2-207ENST00000578234 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
SMARCD2-207ENST00000578234 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
SMARCD2-207ENST00000578234 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
SMARCD2-207ENST00000578234 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
SMARCD2-207ENST00000578234 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
SMARCD2-207ENST00000578234 TRIM37O94972 964 aa18.05■□□□□ 0.48
SMARCD2-207ENST00000578234 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
SMARCD2-207ENST00000578234 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
SMARCD2-207ENST00000578234 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
SMARCD2-207ENST00000578234 LMO7Q8WWI1 1683 aa18.04■□□□□ 0.48
SMARCD2-207ENST00000578234 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
SMARCD2-207ENST00000578234 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
SMARCD2-207ENST00000578234 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
SMARCD2-207ENST00000578234 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
SMARCD2-207ENST00000578234 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
SMARCD2-207ENST00000578234 USP6P35125 1406 aa18.03■□□□□ 0.48
SMARCD2-207ENST00000578234 EVC2Q86UK5 1308 aa18.02■□□□□ 0.48
SMARCD2-207ENST00000578234 APBA3O96018 575 aa18.02■□□□□ 0.48
SMARCD2-207ENST00000578234 NLRP6P59044 892 aa18.02■□□□□ 0.48
SMARCD2-207ENST00000578234 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
SMARCD2-207ENST00000578234 TNS1Q9HBL0 1735 aaKnown RBP18.01■□□□□ 0.47
SMARCD2-207ENST00000578234 TRPM1Q7Z4N2 1603 aa18.01■□□□□ 0.47
SMARCD2-207ENST00000578234 LRP5O75197 1615 aa18■□□□□ 0.47
SMARCD2-207ENST00000578234 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
SMARCD2-207ENST00000578234 CAMKK2Q96RR4 588 aa17.99■□□□□ 0.47
SMARCD2-207ENST00000578234 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
SMARCD2-207ENST00000578234 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
SMARCD2-207ENST00000578234 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
SMARCD2-207ENST00000578234 AATKQ6ZMQ8 1374 aa17.98■□□□□ 0.47
SMARCD2-207ENST00000578234 PARD3Q8TEW0 1356 aa17.97■□□□□ 0.47
SMARCD2-207ENST00000578234 SLIT3O75094 1523 aa17.97■□□□□ 0.47
SMARCD2-207ENST00000578234 CRB1P82279 1406 aa17.97■□□□□ 0.47
SMARCD2-207ENST00000578234 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
SMARCD2-207ENST00000578234 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
SMARCD2-207ENST00000578234 SOX12O15370 315 aa17.94■□□□□ 0.46
SMARCD2-207ENST00000578234 PARP4Q9UKK3 1724 aaKnown RBP17.94■□□□□ 0.46
SMARCD2-207ENST00000578234 TTC21BQ7Z4L5 1316 aa17.94■□□□□ 0.46
SMARCD2-207ENST00000578234 NBPF14Q5TI25 921 aa17.93■□□□□ 0.46
SMARCD2-207ENST00000578234 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
SMARCD2-207ENST00000578234 CPSF1Q10570 1443 aaKnown RBP17.92■□□□□ 0.46
SMARCD2-207ENST00000578234 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
SMARCD2-207ENST00000578234 TTC21AQ8NDW8 1320 aa17.92■□□□□ 0.46
SMARCD2-207ENST00000578234 COL18A1P39060 1754 aa17.91■□□□□ 0.46
SMARCD2-207ENST00000578234 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
SMARCD2-207ENST00000578234 PCGF6Q9BYE7 350 aa17.91■□□□□ 0.46
SMARCD2-207ENST00000578234 AXIN2Q9Y2T1 843 aa17.91■□□□□ 0.46
SMARCD2-207ENST00000578234 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
SMARCD2-207ENST00000578234 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms