RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 TRPM3Q9HCF6 1732 aaPredicted RBP21.53■■□□□ 1.04
IFT20-206ENST00000578122 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
IFT20-206ENST00000578122 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
IFT20-206ENST00000578122 SPATA31A6Q5VVP1 1343 aa21.51■■□□□ 1.03
IFT20-206ENST00000578122 TNS3Q68CZ2 1445 aa21.5■■□□□ 1.03
IFT20-206ENST00000578122 TMC1Q8TDI8 760 aa21.5■■□□□ 1.03
IFT20-206ENST00000578122 AKAP12Q02952 1782 aa21.5■■□□□ 1.03
IFT20-206ENST00000578122 COL22A1Q8NFW1 1626 aaPredicted RBP21.48■■□□□ 1.03
IFT20-206ENST00000578122 PAK3O75914 559 aaPredicted RBP21.48■■□□□ 1.03
IFT20-206ENST00000578122 LMOD2Q6P5Q4 547 aa21.48■■□□□ 1.03
IFT20-206ENST00000578122 ALS2Q96Q42 1657 aa21.47■■□□□ 1.03
IFT20-206ENST00000578122 NUTM2BA6NNL0 878 aaPredicted RBP21.47■■□□□ 1.03
IFT20-206ENST00000578122 NUTM2EB1AL46 878 aaPredicted RBP21.47■■□□□ 1.03
IFT20-206ENST00000578122 NUTM2AQ8IVF1 878 aaPredicted RBP21.47■■□□□ 1.03
IFT20-206ENST00000578122 ZNF692Q9BU19 519 aaPredicted RBP21.47■■□□□ 1.03
IFT20-206ENST00000578122 SLC12A5Q9H2X9 1139 aa21.47■■□□□ 1.03
IFT20-206ENST00000578122 MED1Q15648 1581 aaPredicted RBP21.47■■□□□ 1.03
IFT20-206ENST00000578122 ARHGEF10O15013 1369 aa21.46■■□□□ 1.03
IFT20-206ENST00000578122 NINLQ9Y2I6 1382 aa21.46■■□□□ 1.03
IFT20-206ENST00000578122 BRD4O60885 1362 aaPredicted RBP21.45■■□□□ 1.02
IFT20-206ENST00000578122 USP6P35125 1406 aa21.45■■□□□ 1.02
IFT20-206ENST00000578122 CPSF1Q10570 1443 aaKnown RBP21.45■■□□□ 1.02
IFT20-206ENST00000578122 DSG3P32926 999 aa21.44■■□□□ 1.02
IFT20-206ENST00000578122 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
IFT20-206ENST00000578122 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
IFT20-206ENST00000578122 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
IFT20-206ENST00000578122 KTN1Q86UP2 1357 aaKnown RBP21.43■■□□□ 1.02
IFT20-206ENST00000578122 LRP6O75581 1613 aa21.43■■□□□ 1.02
IFT20-206ENST00000578122 MON2Q7Z3U7 1717 aa21.43■■□□□ 1.02
IFT20-206ENST00000578122 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
IFT20-206ENST00000578122 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
IFT20-206ENST00000578122 SSH2Q76I76 1423 aa21.4■■□□□ 1.02
IFT20-206ENST00000578122 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
IFT20-206ENST00000578122 MEX3CQ5U5Q3 659 aaKnown RBP21.4■■□□□ 1.02
IFT20-206ENST00000578122 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
IFT20-206ENST00000578122 MYOM1P52179 1685 aa21.39■■□□□ 1.01
IFT20-206ENST00000578122 A0A1W2PP64 1363 aa21.38■■□□□ 1.01
IFT20-206ENST00000578122 TTC21BQ7Z4L5 1316 aa21.38■■□□□ 1.01
IFT20-206ENST00000578122 C11orf95C9JLR9 678 aaPredicted RBP21.38■■□□□ 1.01
IFT20-206ENST00000578122 NUTM2GQ5VZR2 741 aa21.38■■□□□ 1.01
IFT20-206ENST00000578122 CABLES1Q8TDN4 633 aa21.38■■□□□ 1.01
IFT20-206ENST00000578122 ABCA3Q99758 1704 aa21.38■■□□□ 1.01
IFT20-206ENST00000578122 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
IFT20-206ENST00000578122 ADAMTS2O95450 1211 aa21.37■■□□□ 1.01
IFT20-206ENST00000578122 HAP1P54257 671 aaPredicted RBP21.37■■□□□ 1.01
IFT20-206ENST00000578122 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
IFT20-206ENST00000578122 TTC21AQ8NDW8 1320 aa21.36■■□□□ 1.01
IFT20-206ENST00000578122 MARF1Q9Y4F3 1742 aaKnown RBP21.35■■□□□ 1.01
IFT20-206ENST00000578122 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
IFT20-206ENST00000578122 CRYBG1Q9Y4K1 1723 aa21.35■■□□□ 1.01
IFT20-206ENST00000578122 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
IFT20-206ENST00000578122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.34■■□□□ 1.01
IFT20-206ENST00000578122 SAMD1Q6SPF0 538 aaPredicted RBP21.33■■□□□ 1.01
IFT20-206ENST00000578122 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
IFT20-206ENST00000578122 NLRP6P59044 892 aa21.32■■□□□ 1
IFT20-206ENST00000578122 KIF7Q2M1P5 1343 aa21.31■■□□□ 1
IFT20-206ENST00000578122 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
IFT20-206ENST00000578122 C8orf37Q96NL8 207 aa21.31■■□□□ 1
IFT20-206ENST00000578122 NGLY1Q96IV0 654 aa21.3■■□□□ 1
IFT20-206ENST00000578122 USP19O94966 1318 aa21.29■■□□□ 1
IFT20-206ENST00000578122 NME9Q86XW9 330 aa21.29■■□□□ 1
IFT20-206ENST00000578122 ZNF219Q9P2Y4 722 aaPredicted RBP21.28■■□□□ 1
IFT20-206ENST00000578122 CARD14Q9BXL6 1004 aa21.27■■□□□ 1
IFT20-206ENST00000578122 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
IFT20-206ENST00000578122 AFF2P51816 1311 aa21.27■□□□□ 0.99
IFT20-206ENST00000578122 CCDC7Q96M83 1385 aa21.26■□□□□ 0.99
IFT20-206ENST00000578122 USP31Q70CQ4 1352 aa21.25■□□□□ 0.99
IFT20-206ENST00000578122 USP54Q70EL1 1684 aa21.25■□□□□ 0.99
IFT20-206ENST00000578122 GCP02774 474 aa21.25■□□□□ 0.99
IFT20-206ENST00000578122 RGS17Q9UGC6 210 aaPredicted RBP21.25■□□□□ 0.99
IFT20-206ENST00000578122 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
IFT20-206ENST00000578122 SLIT3O75094 1523 aa21.24■□□□□ 0.99
IFT20-206ENST00000578122 NSD3Q9BZ95 1437 aa21.24■□□□□ 0.99
IFT20-206ENST00000578122 ZC3H6P61129 1189 aaKnown RBP21.24■□□□□ 0.99
IFT20-206ENST00000578122 PANK3Q9H999 370 aa21.24■□□□□ 0.99
IFT20-206ENST00000578122 KIF20BQ96Q89 1820 aa21.23■□□□□ 0.99
IFT20-206ENST00000578122 FAM83GA6ND36 823 aa21.23■□□□□ 0.99
IFT20-206ENST00000578122 ZNF772Q68DY9 489 aaPredicted RBP21.23■□□□□ 0.99
IFT20-206ENST00000578122 FNBP4Q8N3X1 1017 aaPredicted RBP21.23■□□□□ 0.99
IFT20-206ENST00000578122 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
IFT20-206ENST00000578122 COL14A1Q05707 1796 aaKnown RBP21.22■□□□□ 0.99
IFT20-206ENST00000578122 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
IFT20-206ENST00000578122 MYCNP04198 464 aaPredicted RBP21.21■□□□□ 0.99
IFT20-206ENST00000578122 KCNH5Q8NCM2 988 aa21.21■□□□□ 0.99
IFT20-206ENST00000578122 PLCH1Q4KWH8 1693 aa21.21■□□□□ 0.99
IFT20-206ENST00000578122 FYB1O15117 783 aa21.2■□□□□ 0.98
IFT20-206ENST00000578122 USP21Q9UK80 565 aa21.2■□□□□ 0.98
IFT20-206ENST00000578122 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
IFT20-206ENST00000578122 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
IFT20-206ENST00000578122 SLIT2O94813 1529 aa21.19■□□□□ 0.98
IFT20-206ENST00000578122 NWD2Q9ULI1 1742 aa21.19■□□□□ 0.98
IFT20-206ENST00000578122 SOX12O15370 315 aa21.19■□□□□ 0.98
IFT20-206ENST00000578122 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
IFT20-206ENST00000578122 COG3Q96JB2 828 aa21.19■□□□□ 0.98
IFT20-206ENST00000578122 CPDO75976 1380 aa21.19■□□□□ 0.98
IFT20-206ENST00000578122 POTEAQ6S8J7 498 aa21.18■□□□□ 0.98
IFT20-206ENST00000578122 GGNBP2Q9H3C7 697 aa21.18■□□□□ 0.98
IFT20-206ENST00000578122 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
IFT20-206ENST00000578122 NFAT5O94916 1531 aa21.17■□□□□ 0.98
IFT20-206ENST00000578122 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms