RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 EVC2Q86UK5 1308 aa29.44■■■□□ 2.3
LIMD2-202ENST00000578061 ATRNO75882 1429 aa29.43■■■□□ 2.3
LIMD2-202ENST00000578061 ABCA3Q99758 1704 aa29.42■■■□□ 2.3
LIMD2-202ENST00000578061 NUTM2GQ5VZR2 741 aa29.42■■■□□ 2.3
LIMD2-202ENST00000578061 RGS12O14924 1447 aa29.41■■■□□ 2.3
LIMD2-202ENST00000578061 CABP1Q9NZU7 370 aa29.41■■■□□ 2.3
LIMD2-202ENST00000578061 CDK12Q9NYV4 1490 aaPredicted RBP29.41■■■□□ 2.3
LIMD2-202ENST00000578061 SLIT2O94813 1529 aa29.39■■■□□ 2.3
LIMD2-202ENST00000578061 FAM83GA6ND36 823 aa29.38■■■□□ 2.29
LIMD2-202ENST00000578061 UNC5CLQ8IV45 518 aa29.38■■■□□ 2.29
LIMD2-202ENST00000578061 ABTB2Q8N961 1025 aa29.33■■■□□ 2.29
LIMD2-202ENST00000578061 GJD4Q96KN9 370 aaPredicted RBP29.33■■■□□ 2.29
LIMD2-202ENST00000578061 PLCH1Q4KWH8 1693 aa29.31■■■□□ 2.28
LIMD2-202ENST00000578061 CRYBG1Q9Y4K1 1723 aa29.3■■■□□ 2.28
LIMD2-202ENST00000578061 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.29■■■□□ 2.28
LIMD2-202ENST00000578061 SBNO2Q9Y2G9 1366 aa29.28■■■□□ 2.28
LIMD2-202ENST00000578061 BTG4Q9NY30 223 aa29.28■■■□□ 2.28
LIMD2-202ENST00000578061 CCDC9Q9Y3X0 531 aaKnown RBP29.28■■■□□ 2.28
LIMD2-202ENST00000578061 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
LIMD2-202ENST00000578061 USP6P35125 1406 aa29.27■■■□□ 2.28
LIMD2-202ENST00000578061 ZC3H6P61129 1189 aaKnown RBP29.26■■■□□ 2.27
LIMD2-202ENST00000578061 UPF1Q92900 1129 aaKnown RBP eCLIP29.26■■■□□ 2.272e-6■■□□□ 12.9
LIMD2-202ENST00000578061 VPS72Q15906 364 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 GLI3P10071 1580 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 ATAD2Q6PL18 1390 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 KIAA0232Q92628 1395 aa29.25■■■□□ 2.27
LIMD2-202ENST00000578061 PHRF1Q9P1Y6 1649 aaKnown RBP29.24■■■□□ 2.27
LIMD2-202ENST00000578061 ST20-MTHFSA0A0A6YYL1 179 aa29.24■■■□□ 2.27
LIMD2-202ENST00000578061 CHRNA2Q15822 529 aa29.24■■■□□ 2.27
LIMD2-202ENST00000578061 NWD2Q9ULI1 1742 aa29.24■■■□□ 2.27
LIMD2-202ENST00000578061 CLSPNQ9HAW4 1339 aa29.23■■■□□ 2.27
LIMD2-202ENST00000578061 COL14A1Q05707 1796 aaKnown RBP29.23■■■□□ 2.27
LIMD2-202ENST00000578061 NLRP13Q86W25 1043 aa29.22■■■□□ 2.27
LIMD2-202ENST00000578061 CCER1Q8TC90 406 aaPredicted RBP29.22■■■□□ 2.27
LIMD2-202ENST00000578061 TMC1Q8TDI8 760 aa29.2■■■□□ 2.26
LIMD2-202ENST00000578061 BRD4O60885 1362 aaPredicted RBP29.2■■■□□ 2.26
LIMD2-202ENST00000578061 USP19O94966 1318 aa29.2■■■□□ 2.26
LIMD2-202ENST00000578061 NLRP6P59044 892 aa29.19■■■□□ 2.26
LIMD2-202ENST00000578061 SSH2Q76I76 1423 aa29.19■■■□□ 2.26
LIMD2-202ENST00000578061 NRAPQ86VF7 1730 aa29.18■■■□□ 2.26
LIMD2-202ENST00000578061 TESK2Q96S53 571 aa29.18■■■□□ 2.26
LIMD2-202ENST00000578061 ZNF692Q9BU19 519 aaPredicted RBP29.18■■■□□ 2.26
LIMD2-202ENST00000578061 NRKQ7Z2Y5 1582 aa29.18■■■□□ 2.26
LIMD2-202ENST00000578061 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
LIMD2-202ENST00000578061 TTC21BQ7Z4L5 1316 aa29.17■■■□□ 2.26
LIMD2-202ENST00000578061 GCP02774 474 aa29.16■■■□□ 2.26
LIMD2-202ENST00000578061 KTN1Q86UP2 1357 aaKnown RBP29.15■■■□□ 2.26
LIMD2-202ENST00000578061 CPSF1Q10570 1443 aaKnown RBP29.15■■■□□ 2.26
LIMD2-202ENST00000578061 SLC12A5Q9H2X9 1139 aa29.15■■■□□ 2.26
LIMD2-202ENST00000578061 USP47Q96K76 1375 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 AKAP12Q02952 1782 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 SEPT12Q8IYM1 358 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 STRN4Q9NRL3 753 aa29.14■■■□□ 2.26
LIMD2-202ENST00000578061 ZBTB7CA1YPR0 619 aa29.13■■■□□ 2.25
LIMD2-202ENST00000578061 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
LIMD2-202ENST00000578061 A0A0G2JS52 829 aa29.11■■■□□ 2.25
LIMD2-202ENST00000578061 MYT1Q01538 1121 aa29.11■■■□□ 2.25
LIMD2-202ENST00000578061 FAM98CQ17RN3 349 aaKnown RBP29.11■■■□□ 2.25
LIMD2-202ENST00000578061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.1■■■□□ 2.25
LIMD2-202ENST00000578061 CPDO75976 1380 aa29.1■■■□□ 2.25
LIMD2-202ENST00000578061 CD163L1Q9NR16 1453 aa29.1■■■□□ 2.25
LIMD2-202ENST00000578061 SPATA31A5Q5VU36 1347 aa29.09■■■□□ 2.25
LIMD2-202ENST00000578061 SPATA31A7Q8IWB4 1347 aa29.09■■■□□ 2.25
LIMD2-202ENST00000578061 SOX12O15370 315 aa29.08■■■□□ 2.25
LIMD2-202ENST00000578061 ONECUT3O60422 494 aaPredicted RBP29.08■■■□□ 2.25
LIMD2-202ENST00000578061 TTC21AQ8NDW8 1320 aa29.08■■■□□ 2.25
LIMD2-202ENST00000578061 EVA1CP58658 441 aa29.07■■■□□ 2.24
LIMD2-202ENST00000578061 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
LIMD2-202ENST00000578061 SLIT3O75094 1523 aa29.06■■■□□ 2.24
LIMD2-202ENST00000578061 PUS7Q96PZ0 661 aaKnown RBP29.06■■■□□ 2.24
LIMD2-202ENST00000578061 ZRANB1Q9UGI0 708 aa29.06■■■□□ 2.24
LIMD2-202ENST00000578061 CAMTA1Q9Y6Y1 1673 aa29.05■■■□□ 2.24
LIMD2-202ENST00000578061 MON2Q7Z3U7 1717 aa29.05■■■□□ 2.24
LIMD2-202ENST00000578061 BRWD3Q6RI45 1802 aa29.04■■■□□ 2.24
LIMD2-202ENST00000578061 A0A1W2PP64 1363 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 NME9Q86XW9 330 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 TERF2IPQ9NYB0 399 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 USP35Q9P2H5 1018 aa29.03■■■□□ 2.24
LIMD2-202ENST00000578061 SPATA31A1Q5TZJ5 1347 aa29.02■■■□□ 2.24
LIMD2-202ENST00000578061 SLC24A1O60721 1099 aa29.02■■■□□ 2.24
LIMD2-202ENST00000578061 TMF1P82094 1093 aa29.02■■■□□ 2.24
LIMD2-202ENST00000578061 EP400Q96L91 3159 aa29.01■■■□□ 2.24
LIMD2-202ENST00000578061 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
LIMD2-202ENST00000578061 KRT27Q7Z3Y8 459 aa29.01■■■□□ 2.23
LIMD2-202ENST00000578061 LMO7Q8WWI1 1683 aa29.01■■■□□ 2.23
LIMD2-202ENST00000578061 KCNH5Q8NCM2 988 aa28.98■■■□□ 2.23
LIMD2-202ENST00000578061 EDC4Q6P2E9 1401 aaKnown RBP28.97■■■□□ 2.23
LIMD2-202ENST00000578061 AATKQ6ZMQ8 1374 aa28.97■■■□□ 2.23
LIMD2-202ENST00000578061 ARHGEF25Q86VW2 580 aa28.95■■■□□ 2.22
LIMD2-202ENST00000578061 NINLQ9Y2I6 1382 aa28.95■■■□□ 2.22
LIMD2-202ENST00000578061 COL5A2P05997 1499 aaPredicted RBP28.95■■■□□ 2.22
LIMD2-202ENST00000578061 USP31Q70CQ4 1352 aa28.94■■■□□ 2.22
LIMD2-202ENST00000578061 AXIN2Q9Y2T1 843 aa28.94■■■□□ 2.22
LIMD2-202ENST00000578061 FAM182BQ5T319 152 aa28.93■■■□□ 2.22
LIMD2-202ENST00000578061 NFAT5O94916 1531 aa28.92■■■□□ 2.22
LIMD2-202ENST00000578061 THSD7AQ9UPZ6 1657 aa28.92■■■□□ 2.22
LIMD2-202ENST00000578061 TCP11L2Q8N4U5 519 aa28.9■■■□□ 2.22
LIMD2-202ENST00000578061 COL18A1P39060 1754 aa28.9■■■□□ 2.22
LIMD2-202ENST00000578061 CDCA8Q53HL2 280 aa28.89■■■□□ 2.22
LIMD2-202ENST00000578061 CCDC125Q86Z20 511 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms