RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 KCNA6P17658 529 aa13.81□□□□□ -0.2
NPLOC4-219ENST00000576713 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-219ENST00000576713 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
NPLOC4-219ENST00000576713 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
NPLOC4-219ENST00000576713 NKTRP30414 1462 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-219ENST00000576713 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
NPLOC4-219ENST00000576713 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-219ENST00000576713 AMOTL2Q9Y2J4 779 aa13.78□□□□□ -0.2
NPLOC4-219ENST00000576713 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
NPLOC4-219ENST00000576713 PIK3R4Q99570 1358 aa13.78□□□□□ -0.2
NPLOC4-219ENST00000576713 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.21
NPLOC4-219ENST00000576713 CFAP70Q5T0N1 1121 aa13.77□□□□□ -0.21
NPLOC4-219ENST00000576713 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
NPLOC4-219ENST00000576713 OCEL1Q9H607 264 aa13.77□□□□□ -0.21
NPLOC4-219ENST00000576713 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
NPLOC4-219ENST00000576713 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
NPLOC4-219ENST00000576713 ROBO2Q9HCK4 1378 aa13.75□□□□□ -0.21
NPLOC4-219ENST00000576713 L3MBTL2Q969R5 705 aa13.75□□□□□ -0.21
NPLOC4-219ENST00000576713 PROSER2Q86WR7 435 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-219ENST00000576713 C14orf93Q9H972 538 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-219ENST00000576713 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
NPLOC4-219ENST00000576713 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
NPLOC4-219ENST00000576713 LAMC1P11047 1609 aa13.72□□□□□ -0.21
NPLOC4-219ENST00000576713 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
NPLOC4-219ENST00000576713 TOM1O60784 492 aa13.71□□□□□ -0.21
NPLOC4-219ENST00000576713 PLCG2P16885 1265 aa13.71□□□□□ -0.21
NPLOC4-219ENST00000576713 STK26Q9P289 416 aa13.71□□□□□ -0.21
NPLOC4-219ENST00000576713 PTCH1Q13635 1447 aa13.71□□□□□ -0.22
NPLOC4-219ENST00000576713 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.22
NPLOC4-219ENST00000576713 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
NPLOC4-219ENST00000576713 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.22
NPLOC4-219ENST00000576713 C7P10643 843 aa13.7□□□□□ -0.22
NPLOC4-219ENST00000576713 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-219ENST00000576713 TECPR2O15040 1411 aa13.7□□□□□ -0.22
NPLOC4-219ENST00000576713 KNDC1Q76NI1 1749 aa13.7□□□□□ -0.22
NPLOC4-219ENST00000576713 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-219ENST00000576713 SEC24BO95487 1268 aa13.68□□□□□ -0.22
NPLOC4-219ENST00000576713 NBPF1Q3BBV0 1214 aa13.68□□□□□ -0.22
NPLOC4-219ENST00000576713 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
NPLOC4-219ENST00000576713 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
NPLOC4-219ENST00000576713 ABCC11Q96J66 1382 aa13.68□□□□□ -0.22
NPLOC4-219ENST00000576713 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
NPLOC4-219ENST00000576713 TRPM1Q7Z4N2 1603 aa13.67□□□□□ -0.22
NPLOC4-219ENST00000576713 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
NPLOC4-219ENST00000576713 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
NPLOC4-219ENST00000576713 KIAA1210Q9ULL0 1709 aa13.66□□□□□ -0.22
NPLOC4-219ENST00000576713 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
NPLOC4-219ENST00000576713 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
NPLOC4-219ENST00000576713 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
NPLOC4-219ENST00000576713 MSH6P52701 1360 aa13.64□□□□□ -0.23
NPLOC4-219ENST00000576713 TONSLQ96HA7 1378 aa13.64□□□□□ -0.23
NPLOC4-219ENST00000576713 HSPA1LP34931 641 aa13.64□□□□□ -0.23
NPLOC4-219ENST00000576713 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
NPLOC4-219ENST00000576713 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
NPLOC4-219ENST00000576713 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
NPLOC4-219ENST00000576713 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
NPLOC4-219ENST00000576713 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-219ENST00000576713 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
NPLOC4-219ENST00000576713 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 C19orf44Q9H6X5 657 aa13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 MST1RQ04912 1400 aa13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
NPLOC4-219ENST00000576713 ROBO1Q9Y6N7 1651 aa13.61□□□□□ -0.23
NPLOC4-219ENST00000576713 PDE4AP27815 886 aa13.61□□□□□ -0.23
NPLOC4-219ENST00000576713 SAFB2Q14151 953 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPLOC4-219ENST00000576713 DCCP43146 1447 aa13.6□□□□□ -0.23
NPLOC4-219ENST00000576713 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
NPLOC4-219ENST00000576713 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-219ENST00000576713 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
NPLOC4-219ENST00000576713 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
NPLOC4-219ENST00000576713 G3V3G9 751 aa13.58□□□□□ -0.24
NPLOC4-219ENST00000576713 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
NPLOC4-219ENST00000576713 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-219ENST00000576713 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
NPLOC4-219ENST00000576713 ATF3P18847 181 aa13.57□□□□□ -0.24
NPLOC4-219ENST00000576713 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
NPLOC4-219ENST00000576713 GPRASP1Q5JY77 1395 aa13.57□□□□□ -0.24
NPLOC4-219ENST00000576713 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
NPLOC4-219ENST00000576713 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
NPLOC4-219ENST00000576713 C1orf167Q5SNV9 1468 aa13.56□□□□□ -0.24
NPLOC4-219ENST00000576713 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-219ENST00000576713 USP32Q8NFA0 1604 aa13.56□□□□□ -0.24
NPLOC4-219ENST00000576713 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-219ENST00000576713 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
NPLOC4-219ENST00000576713 MFSD10Q14728 455 aa13.55□□□□□ -0.24
NPLOC4-219ENST00000576713 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
NPLOC4-219ENST00000576713 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-219ENST00000576713 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-219ENST00000576713 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
NPLOC4-219ENST00000576713 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
NPLOC4-219ENST00000576713 POGKQ9P215 609 aa13.54□□□□□ -0.24
NPLOC4-219ENST00000576713 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-219ENST00000576713 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
NPLOC4-219ENST00000576713 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
NPLOC4-219ENST00000576713 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
NPLOC4-219ENST00000576713 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms