RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 ADGRB1O14514 1584 aa15.77■□□□□ 0.11
CALCOCO2-228ENST00000576582 PRDM11Q9NQV5 511 aa15.76■□□□□ 0.11
CALCOCO2-228ENST00000576582 COL14A1Q05707 1796 aaKnown RBP15.76■□□□□ 0.11
CALCOCO2-228ENST00000576582 DISP2A7MBM2 1401 aa15.76■□□□□ 0.11
CALCOCO2-228ENST00000576582 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
CALCOCO2-228ENST00000576582 PRR36Q9H6K5 1346 aa15.75■□□□□ 0.11
CALCOCO2-228ENST00000576582 PAK3O75914 559 aaPredicted RBP15.75■□□□□ 0.11
CALCOCO2-228ENST00000576582 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
CALCOCO2-228ENST00000576582 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
CALCOCO2-228ENST00000576582 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
CALCOCO2-228ENST00000576582 FAM182BQ5T319 152 aa15.74■□□□□ 0.11
CALCOCO2-228ENST00000576582 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
CALCOCO2-228ENST00000576582 TRPM3Q9HCF6 1732 aaPredicted RBP15.74■□□□□ 0.11
CALCOCO2-228ENST00000576582 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
CALCOCO2-228ENST00000576582 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
CALCOCO2-228ENST00000576582 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
CALCOCO2-228ENST00000576582 CAMKK2Q96RR4 588 aa15.72■□□□□ 0.11
CALCOCO2-228ENST00000576582 RGPD1P0DJD0 1748 aa15.71■□□□□ 0.11
CALCOCO2-228ENST00000576582 EZH2Q15910 746 aaKnown RBP15.71■□□□□ 0.11
CALCOCO2-228ENST00000576582 PARD3Q8TEW0 1356 aa15.71■□□□□ 0.11
CALCOCO2-228ENST00000576582 RAB3GAP2Q9H2M9 1393 aa15.71■□□□□ 0.11
CALCOCO2-228ENST00000576582 TRIM37O94972 964 aa15.7■□□□□ 0.1
CALCOCO2-228ENST00000576582 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
CALCOCO2-228ENST00000576582 NUDT16Q96DE0 195 aaKnown RBP15.7■□□□□ 0.1
CALCOCO2-228ENST00000576582 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
CALCOCO2-228ENST00000576582 APBA3O96018 575 aa15.69■□□□□ 0.1
CALCOCO2-228ENST00000576582 KIAA0232Q92628 1395 aa15.69■□□□□ 0.1
CALCOCO2-228ENST00000576582 THSD7AQ9UPZ6 1657 aa15.69■□□□□ 0.1
CALCOCO2-228ENST00000576582 EVA1CP58658 441 aa15.68■□□□□ 0.1
CALCOCO2-228ENST00000576582 PDE3BQ13370 1112 aa15.68■□□□□ 0.1
CALCOCO2-228ENST00000576582 BARGINQ6ZT62 677 aa15.68■□□□□ 0.1
CALCOCO2-228ENST00000576582 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
CALCOCO2-228ENST00000576582 ZC3H6P61129 1189 aaKnown RBP15.67■□□□□ 0.1
CALCOCO2-228ENST00000576582 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
CALCOCO2-228ENST00000576582 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
CALCOCO2-228ENST00000576582 NBPF14Q5TI25 921 aa15.66■□□□□ 0.1
CALCOCO2-228ENST00000576582 C11orf95C9JLR9 678 aaPredicted RBP15.65■□□□□ 0.1
CALCOCO2-228ENST00000576582 CDK19Q9BWU1 502 aa15.65■□□□□ 0.1
CALCOCO2-228ENST00000576582 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
CALCOCO2-228ENST00000576582 CRYBG1Q9Y4K1 1723 aa15.65■□□□□ 0.1
CALCOCO2-228ENST00000576582 ATP7BP35670 1465 aa15.65■□□□□ 0.1
CALCOCO2-228ENST00000576582 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
CALCOCO2-228ENST00000576582 USP35Q9P2H5 1018 aa15.64■□□□□ 0.09
CALCOCO2-228ENST00000576582 POLR3AO14802 1390 aaPredicted RBP15.63■□□□□ 0.09
CALCOCO2-228ENST00000576582 TNS1Q9HBL0 1735 aaKnown RBP15.63■□□□□ 0.09
CALCOCO2-228ENST00000576582 TCP11L2Q8N4U5 519 aa15.63■□□□□ 0.09
CALCOCO2-228ENST00000576582 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
CALCOCO2-228ENST00000576582 NUTM2GQ5VZR2 741 aa15.62■□□□□ 0.09
CALCOCO2-228ENST00000576582 ABTB2Q8N961 1025 aa15.62■□□□□ 0.09
CALCOCO2-228ENST00000576582 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
CALCOCO2-228ENST00000576582 ACEP12821 1306 aa15.62■□□□□ 0.09
CALCOCO2-228ENST00000576582 SSH2Q76I76 1423 aa15.61■□□□□ 0.09
CALCOCO2-228ENST00000576582 CPDO75976 1380 aa15.61■□□□□ 0.09
CALCOCO2-228ENST00000576582 ITSN1Q15811 1721 aa15.6■□□□□ 0.09
CALCOCO2-228ENST00000576582 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
CALCOCO2-228ENST00000576582 NLRP13Q86W25 1043 aa15.6■□□□□ 0.09
CALCOCO2-228ENST00000576582 DCAF8L1A6NGE4 600 aa15.58■□□□□ 0.08
CALCOCO2-228ENST00000576582 GCP02774 474 aa15.58■□□□□ 0.08
CALCOCO2-228ENST00000576582 SPON1Q9HCB6 807 aa15.58■□□□□ 0.08
CALCOCO2-228ENST00000576582 CAMTA1Q9Y6Y1 1673 aa15.57■□□□□ 0.08
CALCOCO2-228ENST00000576582 YY1P25490 414 aa15.57■□□□□ 0.08
CALCOCO2-228ENST00000576582 USP19O94966 1318 aa15.57■□□□□ 0.08
CALCOCO2-228ENST00000576582 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
CALCOCO2-228ENST00000576582 KCNQ2O43526 872 aa15.56■□□□□ 0.08
CALCOCO2-228ENST00000576582 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
CALCOCO2-228ENST00000576582 BRD4O60885 1362 aaPredicted RBP15.56■□□□□ 0.08
CALCOCO2-228ENST00000576582 TOPAZ1Q8N9V7 1692 aa15.56■□□□□ 0.08
CALCOCO2-228ENST00000576582 KIAA1210Q9ULL0 1709 aa15.56■□□□□ 0.08
CALCOCO2-228ENST00000576582 PLSCR1O15162 318 aa15.55■□□□□ 0.08
CALCOCO2-228ENST00000576582 SRPK2P78362 688 aaKnown RBP15.53■□□□□ 0.08
CALCOCO2-228ENST00000576582 RREB1Q92766 1687 aa15.52■□□□□ 0.08
CALCOCO2-228ENST00000576582 CRB1P82279 1406 aa15.51■□□□□ 0.07
CALCOCO2-228ENST00000576582 NINLQ9Y2I6 1382 aa15.51■□□□□ 0.07
CALCOCO2-228ENST00000576582 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
CALCOCO2-228ENST00000576582 NRKQ7Z2Y5 1582 aa15.51■□□□□ 0.07
CALCOCO2-228ENST00000576582 COL5A2P05997 1499 aaPredicted RBP15.51■□□□□ 0.07
CALCOCO2-228ENST00000576582 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 NLRP6P59044 892 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 DDB1Q16531 1140 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 CDCA7Q9BWT1 371 aaPredicted RBP15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 NUP188Q5SRE5 1749 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 OVOS2A0A0G2JMS6 1433 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 PPIP5K1Q6PFW1 1433 aa15.5■□□□□ 0.07
CALCOCO2-228ENST00000576582 NBPF1Q3BBV0 1214 aa15.49■□□□□ 0.07
CALCOCO2-228ENST00000576582 CENPJQ9HC77 1338 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO2-228ENST00000576582 TOM1L2Q6ZVM7 507 aa15.48■□□□□ 0.07
CALCOCO2-228ENST00000576582 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
CALCOCO2-228ENST00000576582 PARP4Q9UKK3 1724 aaKnown RBP15.48■□□□□ 0.07
CALCOCO2-228ENST00000576582 CABP1Q9NZU7 370 aa15.47■□□□□ 0.07
CALCOCO2-228ENST00000576582 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
CALCOCO2-228ENST00000576582 BCL9O00512 1426 aa15.45■□□□□ 0.06
CALCOCO2-228ENST00000576582 WDR17Q8IZU2 1322 aa15.44■□□□□ 0.06
CALCOCO2-228ENST00000576582 USP6P35125 1406 aa15.44■□□□□ 0.06
CALCOCO2-228ENST00000576582 PROM2Q8N271 834 aa15.44■□□□□ 0.06
CALCOCO2-228ENST00000576582 KCNH5Q8NCM2 988 aa15.44■□□□□ 0.06
CALCOCO2-228ENST00000576582 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO2-228ENST00000576582 PEAK1Q9H792 1746 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms