RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.9
POLR2A-204ENST00000575547 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
POLR2A-204ENST00000575547 ACEP12821 1306 aa9.46□□□□□ -0.9
POLR2A-204ENST00000575547 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
POLR2A-204ENST00000575547 ABTB2Q8N961 1025 aa9.45□□□□□ -0.9
POLR2A-204ENST00000575547 BLMP54132 1417 aaPredicted RBP9.45□□□□□ -0.9
POLR2A-204ENST00000575547 TULP4Q9NRJ4 1543 aa9.45□□□□□ -0.9
POLR2A-204ENST00000575547 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
POLR2A-204ENST00000575547 BAG6P46379 1132 aa9.44□□□□□ -0.9
POLR2A-204ENST00000575547 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
POLR2A-204ENST00000575547 GLI3P10071 1580 aa9.44□□□□□ -0.9
POLR2A-204ENST00000575547 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
POLR2A-204ENST00000575547 ADGRB2O60241 1585 aa9.43□□□□□ -0.9
POLR2A-204ENST00000575547 SPATA31A5Q5VU36 1347 aa9.43□□□□□ -0.9
POLR2A-204ENST00000575547 SPATA31A7Q8IWB4 1347 aa9.43□□□□□ -0.9
POLR2A-204ENST00000575547 CENPJQ9HC77 1338 aaPredicted RBP9.43□□□□□ -0.9
POLR2A-204ENST00000575547 CABP2Q9NPB3 220 aa9.43□□□□□ -0.9
POLR2A-204ENST00000575547 USP35Q9P2H5 1018 aa9.43□□□□□ -0.9
POLR2A-204ENST00000575547 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 NLRP13Q86W25 1043 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 L3MBTL2Q969R5 705 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
POLR2A-204ENST00000575547 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
POLR2A-204ENST00000575547 BRWD3Q6RI45 1802 aa9.4□□□□□ -0.9
POLR2A-204ENST00000575547 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.9
POLR2A-204ENST00000575547 SPATA31A1Q5TZJ5 1347 aa9.4□□□□□ -0.9
POLR2A-204ENST00000575547 PLCH1Q4KWH8 1693 aa9.4□□□□□ -0.9
POLR2A-204ENST00000575547 NLRP6P59044 892 aa9.4□□□□□ -0.9
POLR2A-204ENST00000575547 EN1Q05925 392 aaPredicted RBP9.4□□□□□ -0.9
POLR2A-204ENST00000575547 PDE3BQ13370 1112 aa9.4□□□□□ -0.9
POLR2A-204ENST00000575547 FAM196AQ6ZSG2 479 aa9.4□□□□□ -0.9
POLR2A-204ENST00000575547 ATP7BP35670 1465 aa9.4□□□□□ -0.91
POLR2A-204ENST00000575547 COL14A1Q05707 1796 aaKnown RBP9.4□□□□□ -0.91
POLR2A-204ENST00000575547 POLR3AO14802 1390 aaPredicted RBP9.39□□□□□ -0.91
POLR2A-204ENST00000575547 EP400Q96L91 3159 aa9.39□□□□□ -0.91
POLR2A-204ENST00000575547 EVC2Q86UK5 1308 aa9.39□□□□□ -0.91
POLR2A-204ENST00000575547 GCP02774 474 aa9.39□□□□□ -0.91
POLR2A-204ENST00000575547 ARHGEF28Q8N1W1 1705 aaKnown RBP9.39□□□□□ -0.91
POLR2A-204ENST00000575547 PPIP5K1Q6PFW1 1433 aa9.39□□□□□ -0.91
POLR2A-204ENST00000575547 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
POLR2A-204ENST00000575547 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
POLR2A-204ENST00000575547 TRIM37O94972 964 aa9.38□□□□□ -0.91
POLR2A-204ENST00000575547 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
POLR2A-204ENST00000575547 ITSN1Q15811 1721 aa9.37□□□□□ -0.91
POLR2A-204ENST00000575547 ABCA3Q99758 1704 aa9.37□□□□□ -0.91
POLR2A-204ENST00000575547 APBA3O96018 575 aa9.37□□□□□ -0.91
POLR2A-204ENST00000575547 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
POLR2A-204ENST00000575547 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
POLR2A-204ENST00000575547 ZNF692Q9BU19 519 aaPredicted RBP9.37□□□□□ -0.91
POLR2A-204ENST00000575547 KIAA1210Q9ULL0 1709 aa9.36□□□□□ -0.91
POLR2A-204ENST00000575547 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
POLR2A-204ENST00000575547 THRAP3Q9Y2W1 955 aaKnown RBP9.36□□□□□ -0.91
POLR2A-204ENST00000575547 NRAPQ86VF7 1730 aa9.35□□□□□ -0.91
POLR2A-204ENST00000575547 BRD4O60885 1362 aaPredicted RBP9.35□□□□□ -0.91
POLR2A-204ENST00000575547 ROCK2O75116 1388 aaKnown RBP9.35□□□□□ -0.91
POLR2A-204ENST00000575547 USP19O94966 1318 aa9.34□□□□□ -0.91
POLR2A-204ENST00000575547 SSH2Q76I76 1423 aa9.34□□□□□ -0.91
POLR2A-204ENST00000575547 SOX12O15370 315 aa9.34□□□□□ -0.91
POLR2A-204ENST00000575547 R3HDM1Q15032 1099 aaKnown RBP9.34□□□□□ -0.91
POLR2A-204ENST00000575547 TOM1L2Q6ZVM7 507 aa9.34□□□□□ -0.91
POLR2A-204ENST00000575547 CPDO75976 1380 aa9.34□□□□□ -0.91
POLR2A-204ENST00000575547 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
POLR2A-204ENST00000575547 NBPF14Q5TI25 921 aa9.33□□□□□ -0.92
POLR2A-204ENST00000575547 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
POLR2A-204ENST00000575547 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
POLR2A-204ENST00000575547 CAMKK2Q96RR4 588 aa9.33□□□□□ -0.92
POLR2A-204ENST00000575547 TTC21BQ7Z4L5 1316 aa9.32□□□□□ -0.92
POLR2A-204ENST00000575547 SRCAPQ6ZRS2 3230 aa9.32□□□□□ -0.92
POLR2A-204ENST00000575547 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
POLR2A-204ENST00000575547 CARD11Q9BXL7 1154 aa9.32□□□□□ -0.92
POLR2A-204ENST00000575547 CAMTA1Q9Y6Y1 1673 aa9.32□□□□□ -0.92
POLR2A-204ENST00000575547 USP6P35125 1406 aa9.31□□□□□ -0.92
POLR2A-204ENST00000575547 DDB1Q16531 1140 aa9.31□□□□□ -0.92
POLR2A-204ENST00000575547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.31□□□□□ -0.92
POLR2A-204ENST00000575547 AATKQ6ZMQ8 1374 aa9.31□□□□□ -0.92
POLR2A-204ENST00000575547 CRYBG1Q9Y4K1 1723 aa9.31□□□□□ -0.92
POLR2A-204ENST00000575547 PHRF1Q9P1Y6 1649 aaKnown RBP9.31□□□□□ -0.92
POLR2A-204ENST00000575547 TTC21AQ8NDW8 1320 aa9.31□□□□□ -0.92
POLR2A-204ENST00000575547 TOPAZ1Q8N9V7 1692 aa9.3□□□□□ -0.92
POLR2A-204ENST00000575547 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
POLR2A-204ENST00000575547 AXIN2Q9Y2T1 843 aa9.3□□□□□ -0.92
POLR2A-204ENST00000575547 QRICH2Q9H0J4 1663 aa9.29□□□□□ -0.92
POLR2A-204ENST00000575547 KTN1Q86UP2 1357 aaKnown RBP9.29□□□□□ -0.92
POLR2A-204ENST00000575547 RGPD1P0DJD0 1748 aa9.29□□□□□ -0.92
POLR2A-204ENST00000575547 EXOC5O00471 708 aa9.29□□□□□ -0.92
POLR2A-204ENST00000575547 HDGFL2Q7Z4V5 671 aaPredicted RBP9.29□□□□□ -0.92
POLR2A-204ENST00000575547 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
POLR2A-204ENST00000575547 CRB1P82279 1406 aa9.29□□□□□ -0.92
POLR2A-204ENST00000575547 THSD7AQ9UPZ6 1657 aa9.29□□□□□ -0.92
POLR2A-204ENST00000575547 COL5A2P05997 1499 aaPredicted RBP9.28□□□□□ -0.92
POLR2A-204ENST00000575547 PARD3Q8TEW0 1356 aa9.28□□□□□ -0.92
POLR2A-204ENST00000575547 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
POLR2A-204ENST00000575547 SLC12A5Q9H2X9 1139 aa9.28□□□□□ -0.92
POLR2A-204ENST00000575547 DISP2A7MBM2 1401 aa9.28□□□□□ -0.92
POLR2A-204ENST00000575547 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
POLR2A-204ENST00000575547 WDR17Q8IZU2 1322 aa9.28□□□□□ -0.92
POLR2A-204ENST00000575547 CARD10Q9BWT7 1032 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms