RNA–Protein interactions for RNA: ENST00000574632.5

ABR-230, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-230ENST00000574632 C1orf167Q5SNV9 1468 aa17.16■□□□□ 0.34
ABR-230ENST00000574632 XIRP1Q702N8 1843 aaKnown RBP17.16■□□□□ 0.34
ABR-230ENST00000574632 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
ABR-230ENST00000574632 KIF20BQ96Q89 1820 aa17.15■□□□□ 0.34
ABR-230ENST00000574632 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
ABR-230ENST00000574632 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
ABR-230ENST00000574632 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
ABR-230ENST00000574632 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
ABR-230ENST00000574632 MST1RQ04912 1400 aa17.14■□□□□ 0.33
ABR-230ENST00000574632 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
ABR-230ENST00000574632 ANKRD26Q9UPS8 1709 aa17.13■□□□□ 0.33
ABR-230ENST00000574632 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
ABR-230ENST00000574632 COG3Q96JB2 828 aa17.11■□□□□ 0.33
ABR-230ENST00000574632 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
ABR-230ENST00000574632 MTHFSP49914 203 aa17.09■□□□□ 0.33
ABR-230ENST00000574632 PSME1Q06323 249 aa17.09■□□□□ 0.33
ABR-230ENST00000574632 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
ABR-230ENST00000574632 FOXO3O43524 673 aa17.08■□□□□ 0.32
ABR-230ENST00000574632 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
ABR-230ENST00000574632 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
ABR-230ENST00000574632 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
ABR-230ENST00000574632 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
ABR-230ENST00000574632 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
ABR-230ENST00000574632 PAK3O75914 559 aaPredicted RBP17.06■□□□□ 0.32
ABR-230ENST00000574632 FBLN1P23142 703 aa17.06■□□□□ 0.32
ABR-230ENST00000574632 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
ABR-230ENST00000574632 KRT28Q7Z3Y7 464 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 SLAIN2Q9P270 581 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 PIK3C2AO00443 1686 aa17.04■□□□□ 0.32
ABR-230ENST00000574632 NLRP6P59044 892 aa17.03■□□□□ 0.32
ABR-230ENST00000574632 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
ABR-230ENST00000574632 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.32
ABR-230ENST00000574632 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
ABR-230ENST00000574632 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
ABR-230ENST00000574632 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
ABR-230ENST00000574632 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
ABR-230ENST00000574632 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
ABR-230ENST00000574632 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
ABR-230ENST00000574632 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
ABR-230ENST00000574632 INSRP06213 1382 aa17■□□□□ 0.31
ABR-230ENST00000574632 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
ABR-230ENST00000574632 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
ABR-230ENST00000574632 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
ABR-230ENST00000574632 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
ABR-230ENST00000574632 SMG6Q86US8 1419 aaKnown RBP16.99■□□□□ 0.31
ABR-230ENST00000574632 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
ABR-230ENST00000574632 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
ABR-230ENST00000574632 SOX12O15370 315 aa16.98■□□□□ 0.31
ABR-230ENST00000574632 MARF1Q9Y4F3 1742 aaKnown RBP16.98■□□□□ 0.31
ABR-230ENST00000574632 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
ABR-230ENST00000574632 BLMP54132 1417 aaPredicted RBP16.96■□□□□ 0.31
ABR-230ENST00000574632 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.31
ABR-230ENST00000574632 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
ABR-230ENST00000574632 SBNO1A3KN83 1393 aa16.96■□□□□ 0.31
ABR-230ENST00000574632 PXDNQ92626 1479 aa16.96■□□□□ 0.31
ABR-230ENST00000574632 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
ABR-230ENST00000574632 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
ABR-230ENST00000574632 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
ABR-230ENST00000574632 NUDCQ9Y266 331 aa16.94■□□□□ 0.3
ABR-230ENST00000574632 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
ABR-230ENST00000574632 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
ABR-230ENST00000574632 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
ABR-230ENST00000574632 USP19O94966 1318 aa16.92■□□□□ 0.3
ABR-230ENST00000574632 SOS2Q07890 1332 aaPredicted RBP16.92■□□□□ 0.3
ABR-230ENST00000574632 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
ABR-230ENST00000574632 ZBED9Q6R2W3 1325 aa16.92■□□□□ 0.3
ABR-230ENST00000574632 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
ABR-230ENST00000574632 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
ABR-230ENST00000574632 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
ABR-230ENST00000574632 IL13P35225 146 aa16.91■□□□□ 0.3
ABR-230ENST00000574632 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABR-230ENST00000574632 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
ABR-230ENST00000574632 KCNH5Q8NCM2 988 aa16.91■□□□□ 0.3
ABR-230ENST00000574632 SLIT3O75094 1523 aa16.91■□□□□ 0.3
ABR-230ENST00000574632 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
ABR-230ENST00000574632 NFAT5O94916 1531 aa16.9■□□□□ 0.3
ABR-230ENST00000574632 GCP02774 474 aa16.89■□□□□ 0.29
ABR-230ENST00000574632 AMPHP49418 695 aa16.89■□□□□ 0.29
ABR-230ENST00000574632 HSP90AB2PQ58FF8 381 aa16.89■□□□□ 0.29
ABR-230ENST00000574632 FLT4P35916 1363 aa16.89■□□□□ 0.29
ABR-230ENST00000574632 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
ABR-230ENST00000574632 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
ABR-230ENST00000574632 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
ABR-230ENST00000574632 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
ABR-230ENST00000574632 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
ABR-230ENST00000574632 HOXC9P31274 260 aa16.86■□□□□ 0.29
ABR-230ENST00000574632 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
ABR-230ENST00000574632 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
ABR-230ENST00000574632 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
ABR-230ENST00000574632 APAF1O14727 1248 aa16.85■□□□□ 0.29
ABR-230ENST00000574632 ARHGEF25Q86VW2 580 aa16.85■□□□□ 0.29
ABR-230ENST00000574632 RTL1A6NKG5 1358 aa16.85■□□□□ 0.29
ABR-230ENST00000574632 TOM1O60784 492 aa16.84■□□□□ 0.29
ABR-230ENST00000574632 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
ABR-230ENST00000574632 IP6K1Q92551 441 aa16.84■□□□□ 0.29
ABR-230ENST00000574632 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms