RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ANKRD36BQ8N2N9 1353 aa20.03■□□□□ 0.8
NPLOC4-209ENST00000572760 SPATA31A3Q5VYP0 1347 aa20.02■□□□□ 0.8
NPLOC4-209ENST00000572760 JCADQ9P266 1359 aa20.02■□□□□ 0.8
NPLOC4-209ENST00000572760 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
NPLOC4-209ENST00000572760 TNS3Q68CZ2 1445 aa20.02■□□□□ 0.79
NPLOC4-209ENST00000572760 PLEKHG5O94827 1062 aa20■□□□□ 0.79
NPLOC4-209ENST00000572760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
NPLOC4-209ENST00000572760 ABTB2Q8N961 1025 aa20■□□□□ 0.79
NPLOC4-209ENST00000572760 SHPRHQ149N8 1683 aa20■□□□□ 0.79
NPLOC4-209ENST00000572760 ALS2Q96Q42 1657 aa20■□□□□ 0.79
NPLOC4-209ENST00000572760 TTC21BQ7Z4L5 1316 aa20■□□□□ 0.79
NPLOC4-209ENST00000572760 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
NPLOC4-209ENST00000572760 PANK3Q9H999 370 aa19.99■□□□□ 0.79
NPLOC4-209ENST00000572760 TTC21AQ8NDW8 1320 aa19.99■□□□□ 0.79
NPLOC4-209ENST00000572760 EDC4Q6P2E9 1401 aaKnown RBP19.98■□□□□ 0.79
NPLOC4-209ENST00000572760 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
NPLOC4-209ENST00000572760 NRKQ7Z2Y5 1582 aa19.97■□□□□ 0.79
NPLOC4-209ENST00000572760 ZNF316A6NFI3 1004 aaPredicted RBP19.97■□□□□ 0.79
NPLOC4-209ENST00000572760 NUTM2GQ5VZR2 741 aa19.97■□□□□ 0.79
NPLOC4-209ENST00000572760 HAP1P54257 671 aaPredicted RBP19.96■□□□□ 0.79
NPLOC4-209ENST00000572760 KIF20BQ96Q89 1820 aa19.95■□□□□ 0.78
NPLOC4-209ENST00000572760 SSH2Q76I76 1423 aa19.95■□□□□ 0.78
NPLOC4-209ENST00000572760 NSD3Q9BZ95 1437 aa19.95■□□□□ 0.78
NPLOC4-209ENST00000572760 NLRP6P59044 892 aa19.95■□□□□ 0.78
NPLOC4-209ENST00000572760 NLRP13Q86W25 1043 aa19.95■□□□□ 0.78
NPLOC4-209ENST00000572760 NUTM2BA6NNL0 878 aaPredicted RBP19.94■□□□□ 0.78
NPLOC4-209ENST00000572760 NUTM2EB1AL46 878 aaPredicted RBP19.94■□□□□ 0.78
NPLOC4-209ENST00000572760 NUTM2AQ8IVF1 878 aaPredicted RBP19.94■□□□□ 0.78
NPLOC4-209ENST00000572760 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
NPLOC4-209ENST00000572760 CARD14Q9BXL6 1004 aa19.93■□□□□ 0.78
NPLOC4-209ENST00000572760 SPATA31A6Q5VVP1 1343 aa19.93■□□□□ 0.78
NPLOC4-209ENST00000572760 PIK3C2AO00443 1686 aa19.93■□□□□ 0.78
NPLOC4-209ENST00000572760 NME9Q86XW9 330 aa19.92■□□□□ 0.78
NPLOC4-209ENST00000572760 KNSTRNQ9Y448 316 aa19.92■□□□□ 0.78
NPLOC4-209ENST00000572760 CABLES1Q8TDN4 633 aa19.91■□□□□ 0.78
NPLOC4-209ENST00000572760 CGNL1Q0VF96 1302 aa19.9■□□□□ 0.78
NPLOC4-209ENST00000572760 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
NPLOC4-209ENST00000572760 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
NPLOC4-209ENST00000572760 MEX3CQ5U5Q3 659 aaKnown RBP19.88■□□□□ 0.77
NPLOC4-209ENST00000572760 COG3Q96JB2 828 aa19.88■□□□□ 0.77
NPLOC4-209ENST00000572760 GGNBP2Q9H3C7 697 aa19.88■□□□□ 0.77
NPLOC4-209ENST00000572760 PHRF1Q9P1Y6 1649 aaKnown RBP19.87■□□□□ 0.77
NPLOC4-209ENST00000572760 MED1Q15648 1581 aaPredicted RBP19.87■□□□□ 0.77
NPLOC4-209ENST00000572760 ZRANB1Q9UGI0 708 aa19.87■□□□□ 0.77
NPLOC4-209ENST00000572760 MARF1Q9Y4F3 1742 aaKnown RBP19.87■□□□□ 0.77
NPLOC4-209ENST00000572760 CRYBG1Q9Y4K1 1723 aa19.86■□□□□ 0.77
NPLOC4-209ENST00000572760 FYB1O15117 783 aa19.86■□□□□ 0.77
NPLOC4-209ENST00000572760 SOX12O15370 315 aa19.86■□□□□ 0.77
NPLOC4-209ENST00000572760 ADAMTS2O95450 1211 aa19.86■□□□□ 0.77
NPLOC4-209ENST00000572760 USP31Q70CQ4 1352 aa19.85■□□□□ 0.77
NPLOC4-209ENST00000572760 USP54Q70EL1 1684 aa19.85■□□□□ 0.77
NPLOC4-209ENST00000572760 ANKRD26Q9UPS8 1709 aa19.85■□□□□ 0.77
NPLOC4-209ENST00000572760 KCNH5Q8NCM2 988 aa19.84■□□□□ 0.77
NPLOC4-209ENST00000572760 USP19O94966 1318 aa19.83■□□□□ 0.77
NPLOC4-209ENST00000572760 GCP02774 474 aa19.83■□□□□ 0.77
NPLOC4-209ENST00000572760 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
NPLOC4-209ENST00000572760 CNGB1Q14028 1251 aaPredicted RBP19.82■□□□□ 0.76
NPLOC4-209ENST00000572760 LRP6O75581 1613 aa19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 PER1O15534 1290 aaPredicted RBP19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 OVOS2A0A0J9YW53 1432 aa19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 OVOS2Q6IE36 1432 aa19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 NSD2O96028 1365 aa19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 SLIT3O75094 1523 aa19.81■□□□□ 0.76
NPLOC4-209ENST00000572760 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
NPLOC4-209ENST00000572760 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
NPLOC4-209ENST00000572760 NGLY1Q96IV0 654 aa19.79■□□□□ 0.76
NPLOC4-209ENST00000572760 C8orf37Q96NL8 207 aa19.79■□□□□ 0.76
NPLOC4-209ENST00000572760 PRDM11Q9NQV5 511 aa19.79■□□□□ 0.76
NPLOC4-209ENST00000572760 LTN1O94822 1766 aa19.79■□□□□ 0.76
NPLOC4-209ENST00000572760 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
NPLOC4-209ENST00000572760 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
NPLOC4-209ENST00000572760 KIAA0232Q92628 1395 aa19.77■□□□□ 0.76
NPLOC4-209ENST00000572760 COL14A1Q05707 1796 aaKnown RBP19.75■□□□□ 0.75
NPLOC4-209ENST00000572760 TNNT2P45379 298 aaPredicted RBP19.75■□□□□ 0.75
NPLOC4-209ENST00000572760 PHF23Q9BUL5 403 aaPredicted RBP19.75■□□□□ 0.75
NPLOC4-209ENST00000572760 CHRNA2Q15822 529 aa19.74■□□□□ 0.75
NPLOC4-209ENST00000572760 NFAT5O94916 1531 aa19.74■□□□□ 0.75
NPLOC4-209ENST00000572760 CPDO75976 1380 aa19.73■□□□□ 0.75
NPLOC4-209ENST00000572760 NPC1L1Q9UHC9 1359 aa19.73■□□□□ 0.75
NPLOC4-209ENST00000572760 RGPD5Q99666 1765 aa19.73■□□□□ 0.75
NPLOC4-209ENST00000572760 PLCH1Q4KWH8 1693 aa19.73■□□□□ 0.75
NPLOC4-209ENST00000572760 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
NPLOC4-209ENST00000572760 FBLN1P23142 703 aa19.72■□□□□ 0.75
NPLOC4-209ENST00000572760 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
NPLOC4-209ENST00000572760 AMPHP49418 695 aa19.71■□□□□ 0.75
NPLOC4-209ENST00000572760 AFF2P51816 1311 aa19.71■□□□□ 0.75
NPLOC4-209ENST00000572760 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
NPLOC4-209ENST00000572760 RRS1Q15050 365 aaKnown RBP19.7■□□□□ 0.74
NPLOC4-209ENST00000572760 BTG4Q9NY30 223 aa19.69■□□□□ 0.74
NPLOC4-209ENST00000572760 USP21Q9UK80 565 aa19.69■□□□□ 0.74
NPLOC4-209ENST00000572760 MAP3K19Q56UN5 1328 aa19.69■□□□□ 0.74
NPLOC4-209ENST00000572760 COL18A1P39060 1754 aa19.68■□□□□ 0.74
NPLOC4-209ENST00000572760 PPM1GO15355 546 aaPredicted RBP19.68■□□□□ 0.74
NPLOC4-209ENST00000572760 EVA1CP58658 441 aa19.68■□□□□ 0.74
NPLOC4-209ENST00000572760 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
NPLOC4-209ENST00000572760 FNBP4Q8N3X1 1017 aaPredicted RBP19.67■□□□□ 0.74
NPLOC4-209ENST00000572760 ZNF772Q68DY9 489 aaPredicted RBP19.66■□□□□ 0.74
NPLOC4-209ENST00000572760 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
NPLOC4-209ENST00000572760 SLIT2O94813 1529 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms