RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 VPS72Q15906 364 aa24.98■■□□□ 1.59
LITAF-211ENST00000572255 CCDC61Q9Y6R9 512 aa24.97■■□□□ 1.59
LITAF-211ENST00000572255 QRICH2Q9H0J4 1663 aa24.97■■□□□ 1.59
LITAF-211ENST00000572255 NRAPQ86VF7 1730 aa24.96■■□□□ 1.59
LITAF-211ENST00000572255 TRPM1Q7Z4N2 1603 aa24.96■■□□□ 1.59
LITAF-211ENST00000572255 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.59
LITAF-211ENST00000572255 POLR3AO14802 1390 aaPredicted RBP24.95■■□□□ 1.59
LITAF-211ENST00000572255 NEUROD1Q13562 356 aa24.95■■□□□ 1.58
LITAF-211ENST00000572255 ACEP12821 1306 aa24.94■■□□□ 1.58
LITAF-211ENST00000572255 CCDC9Q9Y3X0 531 aaKnown RBP24.94■■□□□ 1.58
LITAF-211ENST00000572255 BRWD3Q6RI45 1802 aa24.93■■□□□ 1.58
LITAF-211ENST00000572255 PLEKHG3A1L390 1219 aa24.93■■□□□ 1.58
LITAF-211ENST00000572255 PHRF1Q9P1Y6 1649 aaKnown RBP24.91■■□□□ 1.58
LITAF-211ENST00000572255 SRPK2P78362 688 aaKnown RBP24.91■■□□□ 1.58
LITAF-211ENST00000572255 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
LITAF-211ENST00000572255 BTG4Q9NY30 223 aa24.91■■□□□ 1.58
LITAF-211ENST00000572255 SEPT12Q8IYM1 358 aa24.89■■□□□ 1.58
LITAF-211ENST00000572255 PPIP5K1Q6PFW1 1433 aa24.88■■□□□ 1.57
LITAF-211ENST00000572255 CABP2Q9NPB3 220 aa24.88■■□□□ 1.57
LITAF-211ENST00000572255 ONECUT3O60422 494 aaPredicted RBP24.87■■□□□ 1.57
LITAF-211ENST00000572255 NUTM2GQ5VZR2 741 aa24.87■■□□□ 1.57
LITAF-211ENST00000572255 PRDM11Q9NQV5 511 aa24.87■■□□□ 1.57
LITAF-211ENST00000572255 ROCK2O75116 1388 aaKnown RBP24.86■■□□□ 1.57
LITAF-211ENST00000572255 CCDC125Q86Z20 511 aa24.86■■□□□ 1.57
LITAF-211ENST00000572255 KIAA0232Q92628 1395 aa24.85■■□□□ 1.57
LITAF-211ENST00000572255 ABTB2Q8N961 1025 aa24.82■■□□□ 1.56
LITAF-211ENST00000572255 NRKQ7Z2Y5 1582 aa24.81■■□□□ 1.56
LITAF-211ENST00000572255 CHRNA2Q15822 529 aa24.81■■□□□ 1.56
LITAF-211ENST00000572255 FAM98CQ17RN3 349 aaKnown RBP24.81■■□□□ 1.56
LITAF-211ENST00000572255 A0A0G2JS52 829 aa24.8■■□□□ 1.56
LITAF-211ENST00000572255 ZC3H6P61129 1189 aaKnown RBP24.8■■□□□ 1.56
LITAF-211ENST00000572255 MYT1Q01538 1121 aa24.8■■□□□ 1.56
LITAF-211ENST00000572255 KRT27Q7Z3Y8 459 aa24.8■■□□□ 1.56
LITAF-211ENST00000572255 SPATA31A5Q5VU36 1347 aa24.8■■□□□ 1.56
LITAF-211ENST00000572255 EVC2Q86UK5 1308 aa24.8■■□□□ 1.56
LITAF-211ENST00000572255 SPATA31A7Q8IWB4 1347 aa24.8■■□□□ 1.56
LITAF-211ENST00000572255 BLMP54132 1417 aaPredicted RBP24.79■■□□□ 1.56
LITAF-211ENST00000572255 CABP1Q9NZU7 370 aa24.79■■□□□ 1.56
LITAF-211ENST00000572255 USP19O94966 1318 aa24.78■■□□□ 1.56
LITAF-211ENST00000572255 BRD4O60885 1362 aaPredicted RBP24.78■■□□□ 1.56
LITAF-211ENST00000572255 USP6P35125 1406 aa24.77■■□□□ 1.56
LITAF-211ENST00000572255 NLRP13Q86W25 1043 aa24.75■■□□□ 1.55
LITAF-211ENST00000572255 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
LITAF-211ENST00000572255 STRN4Q9NRL3 753 aa24.74■■□□□ 1.55
LITAF-211ENST00000572255 CPDO75976 1380 aa24.74■■□□□ 1.55
LITAF-211ENST00000572255 TONSLQ96HA7 1378 aa24.73■■□□□ 1.55
LITAF-211ENST00000572255 LMO7Q8WWI1 1683 aa24.72■■□□□ 1.55
LITAF-211ENST00000572255 SPATA31A1Q5TZJ5 1347 aa24.72■■□□□ 1.55
LITAF-211ENST00000572255 GCP02774 474 aa24.71■■□□□ 1.55
LITAF-211ENST00000572255 TRIM26Q12899 539 aaPredicted RBP24.71■■□□□ 1.55
LITAF-211ENST00000572255 CAMTA1Q9Y6Y1 1673 aa24.71■■□□□ 1.55
LITAF-211ENST00000572255 SSH2Q76I76 1423 aa24.7■■□□□ 1.55
LITAF-211ENST00000572255 SF3B2Q13435 895 aaKnown RBP24.7■■□□□ 1.54
LITAF-211ENST00000572255 ZRANB1Q9UGI0 708 aa24.7■■□□□ 1.54
LITAF-211ENST00000572255 AKAP12Q02952 1782 aa24.7■■□□□ 1.54
LITAF-211ENST00000572255 PIK3C2AO00443 1686 aa24.69■■□□□ 1.54
LITAF-211ENST00000572255 CARD11Q9BXL7 1154 aa24.69■■□□□ 1.54
LITAF-211ENST00000572255 EVA1CP58658 441 aa24.68■■□□□ 1.54
LITAF-211ENST00000572255 NLRP6P59044 892 aa24.68■■□□□ 1.54
LITAF-211ENST00000572255 DEFB132Q7Z7B7 95 aa24.68■■□□□ 1.54
LITAF-211ENST00000572255 SBNO2Q9Y2G9 1366 aa24.67■■□□□ 1.54
LITAF-211ENST00000572255 SLIT3O75094 1523 aa24.67■■□□□ 1.54
LITAF-211ENST00000572255 FAM182BQ5T319 152 aa24.65■■□□□ 1.54
LITAF-211ENST00000572255 ZNF692Q9BU19 519 aaPredicted RBP24.65■■□□□ 1.54
LITAF-211ENST00000572255 LARP1Q6PKG0 1096 aaKnown RBP24.64■■□□□ 1.54
LITAF-211ENST00000572255 USP35Q9P2H5 1018 aa24.64■■□□□ 1.54
LITAF-211ENST00000572255 TTC21BQ7Z4L5 1316 aa24.63■■□□□ 1.53
LITAF-211ENST00000572255 CPSF1Q10570 1443 aaKnown RBP24.63■■□□□ 1.53
LITAF-211ENST00000572255 RGPD1P0DJD0 1748 aa24.63■■□□□ 1.53
LITAF-211ENST00000572255 COL5A2P05997 1499 aaPredicted RBP24.62■■□□□ 1.53
LITAF-211ENST00000572255 SRCAPQ6ZRS2 3230 aa24.61■■□□□ 1.53
LITAF-211ENST00000572255 ZBTB7CA1YPR0 619 aa24.61■■□□□ 1.53
LITAF-211ENST00000572255 BARGINQ6ZT62 677 aa24.61■■□□□ 1.53
LITAF-211ENST00000572255 AATKQ6ZMQ8 1374 aa24.6■■□□□ 1.53
LITAF-211ENST00000572255 KTN1Q86UP2 1357 aaKnown RBP24.6■■□□□ 1.53
LITAF-211ENST00000572255 MON2Q7Z3U7 1717 aa24.6■■□□□ 1.53
LITAF-211ENST00000572255 TTC21AQ8NDW8 1320 aa24.6■■□□□ 1.53
LITAF-211ENST00000572255 BAG6P46379 1132 aa24.59■■□□□ 1.53
LITAF-211ENST00000572255 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
LITAF-211ENST00000572255 COL18A1P39060 1754 aa24.58■■□□□ 1.53
LITAF-211ENST00000572255 TNS1Q9HBL0 1735 aaKnown RBP24.57■■□□□ 1.52
LITAF-211ENST00000572255 THRAP3Q9Y2W1 955 aaKnown RBP24.56■■□□□ 1.52
LITAF-211ENST00000572255 CRB1P82279 1406 aa24.55■■□□□ 1.52
LITAF-211ENST00000572255 CD163L1Q9NR16 1453 aa24.54■■□□□ 1.52
LITAF-211ENST00000572255 FAM196AQ6ZSG2 479 aa24.54■■□□□ 1.52
LITAF-211ENST00000572255 KCNH5Q8NCM2 988 aa24.54■■□□□ 1.52
LITAF-211ENST00000572255 PARP4Q9UKK3 1724 aaKnown RBP24.53■■□□□ 1.52
LITAF-211ENST00000572255 PDE3BQ13370 1112 aa24.53■■□□□ 1.52
LITAF-211ENST00000572255 NFAT5O94916 1531 aa24.52■■□□□ 1.52
LITAF-211ENST00000572255 SOX12O15370 315 aa24.52■■□□□ 1.52
LITAF-211ENST00000572255 ARHGEF25Q86VW2 580 aa24.52■■□□□ 1.52
LITAF-211ENST00000572255 TMC1Q8TDI8 760 aa24.52■■□□□ 1.52
LITAF-211ENST00000572255 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
LITAF-211ENST00000572255 EN1Q05925 392 aaPredicted RBP24.51■■□□□ 1.51
LITAF-211ENST00000572255 AXIN2Q9Y2T1 843 aa24.51■■□□□ 1.51
LITAF-211ENST00000572255 RGPD5Q99666 1765 aa24.51■■□□□ 1.51
LITAF-211ENST00000572255 TRIM37O94972 964 aa24.5■■□□□ 1.51
LITAF-211ENST00000572255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.5■■□□□ 1.51
LITAF-211ENST00000572255 USP54Q70EL1 1684 aa24.5■■□□□ 1.51
LITAF-211ENST00000572255 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms