RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 TONSLQ96HA7 1378 aa29.94■■■□□ 2.38
ABR-213ENST00000571543 CCDC61Q9Y6R9 512 aa29.94■■■□□ 2.38
ABR-213ENST00000571543 QRICH2Q9H0J4 1663 aa29.93■■■□□ 2.38
ABR-213ENST00000571543 SRPK2P78362 688 aaKnown RBP29.93■■■□□ 2.38
ABR-213ENST00000571543 RALGAPBQ86X10 1494 aa29.92■■■□□ 2.38
ABR-213ENST00000571543 NRAPQ86VF7 1730 aa29.91■■■□□ 2.38
ABR-213ENST00000571543 PAK3O75914 559 aaPredicted RBP29.91■■■□□ 2.38
ABR-213ENST00000571543 GJD4Q96KN9 370 aaPredicted RBP29.91■■■□□ 2.38
ABR-213ENST00000571543 CABP2Q9NPB3 220 aa29.91■■■□□ 2.38
ABR-213ENST00000571543 UNC5CLQ8IV45 518 aa29.9■■■□□ 2.38
ABR-213ENST00000571543 TOPAZ1Q8N9V7 1692 aa29.89■■■□□ 2.38
ABR-213ENST00000571543 PLEKHG3A1L390 1219 aa29.89■■■□□ 2.38
ABR-213ENST00000571543 ACEP12821 1306 aa29.89■■■□□ 2.38
ABR-213ENST00000571543 POLR3AO14802 1390 aaPredicted RBP29.87■■■□□ 2.37
ABR-213ENST00000571543 COL14A1Q05707 1796 aaKnown RBP29.83■■■□□ 2.37
ABR-213ENST00000571543 PPIP5K1Q6PFW1 1433 aa29.83■■■□□ 2.37
ABR-213ENST00000571543 EVC2Q86UK5 1308 aa29.82■■■□□ 2.36
ABR-213ENST00000571543 CARD11Q9BXL7 1154 aa29.82■■■□□ 2.36
ABR-213ENST00000571543 FAM83GA6ND36 823 aa29.8■■■□□ 2.36
ABR-213ENST00000571543 PHRF1Q9P1Y6 1649 aaKnown RBP29.79■■■□□ 2.36
ABR-213ENST00000571543 CABP1Q9NZU7 370 aa29.78■■■□□ 2.36
ABR-213ENST00000571543 VPS72Q15906 364 aa29.77■■■□□ 2.36
ABR-213ENST00000571543 NUTM2GQ5VZR2 741 aa29.77■■■□□ 2.36
ABR-213ENST00000571543 PCGF6Q9BYE7 350 aa29.75■■■□□ 2.35
ABR-213ENST00000571543 ABTB2Q8N961 1025 aa29.72■■■□□ 2.35
ABR-213ENST00000571543 BTG4Q9NY30 223 aa29.69■■■□□ 2.34
ABR-213ENST00000571543 CCDC9Q9Y3X0 531 aaKnown RBP29.69■■■□□ 2.34
ABR-213ENST00000571543 SEPT12Q8IYM1 358 aa29.68■■■□□ 2.34
ABR-213ENST00000571543 SBNO2Q9Y2G9 1366 aa29.67■■■□□ 2.34
ABR-213ENST00000571543 PRDM11Q9NQV5 511 aa29.67■■■□□ 2.34
ABR-213ENST00000571543 USP6P35125 1406 aa29.66■■■□□ 2.34
ABR-213ENST00000571543 CCDC125Q86Z20 511 aa29.66■■■□□ 2.34
ABR-213ENST00000571543 BLMP54132 1417 aaPredicted RBP29.65■■■□□ 2.34
ABR-213ENST00000571543 ZC3H6P61129 1189 aaKnown RBP29.65■■■□□ 2.34
ABR-213ENST00000571543 BRD4O60885 1362 aaPredicted RBP29.64■■■□□ 2.34
ABR-213ENST00000571543 KIAA0232Q92628 1395 aa29.64■■■□□ 2.34
ABR-213ENST00000571543 NRKQ7Z2Y5 1582 aa29.64■■■□□ 2.34
ABR-213ENST00000571543 ONECUT3O60422 494 aaPredicted RBP29.64■■■□□ 2.34
ABR-213ENST00000571543 SRCAPQ6ZRS2 3230 aa29.63■■■□□ 2.33
ABR-213ENST00000571543 CHRNA2Q15822 529 aa29.63■■■□□ 2.33
ABR-213ENST00000571543 NLRP13Q86W25 1043 aa29.63■■■□□ 2.33
ABR-213ENST00000571543 THSD7AQ9UPZ6 1657 aa29.63■■■□□ 2.33
ABR-213ENST00000571543 USP19O94966 1318 aa29.61■■■□□ 2.33
ABR-213ENST00000571543 ZNF692Q9BU19 519 aaPredicted RBP29.6■■■□□ 2.33
ABR-213ENST00000571543 SSH2Q76I76 1423 aa29.6■■■□□ 2.33
ABR-213ENST00000571543 CLSPNQ9HAW4 1339 aa29.58■■■□□ 2.33
ABR-213ENST00000571543 ST20-MTHFSA0A0A6YYL1 179 aa29.57■■■□□ 2.32
ABR-213ENST00000571543 GCP02774 474 aa29.57■■■□□ 2.32
ABR-213ENST00000571543 NLRP6P59044 892 aa29.57■■■□□ 2.32
ABR-213ENST00000571543 FAM98CQ17RN3 349 aaKnown RBP29.57■■■□□ 2.32
ABR-213ENST00000571543 KRT27Q7Z3Y8 459 aa29.57■■■□□ 2.32
ABR-213ENST00000571543 CPSF1Q10570 1443 aaKnown RBP29.55■■■□□ 2.32
ABR-213ENST00000571543 SPATA31A5Q5VU36 1347 aa29.55■■■□□ 2.32
ABR-213ENST00000571543 SPATA31A7Q8IWB4 1347 aa29.55■■■□□ 2.32
ABR-213ENST00000571543 RGPD1P0DJD0 1748 aa29.55■■■□□ 2.32
ABR-213ENST00000571543 A0A0G2JS52 829 aa29.55■■■□□ 2.32
ABR-213ENST00000571543 MYT1Q01538 1121 aa29.55■■■□□ 2.32
ABR-213ENST00000571543 AKAP12Q02952 1782 aa29.54■■■□□ 2.32
ABR-213ENST00000571543 LMO7Q8WWI1 1683 aa29.54■■■□□ 2.32
ABR-213ENST00000571543 TTC21BQ7Z4L5 1316 aa29.54■■■□□ 2.32
ABR-213ENST00000571543 TESK2Q96S53 571 aa29.54■■■□□ 2.32
ABR-213ENST00000571543 TMC1Q8TDI8 760 aa29.53■■■□□ 2.32
ABR-213ENST00000571543 TIMELESSQ9UNS1 1208 aa29.53■■■□□ 2.32
ABR-213ENST00000571543 CPDO75976 1380 aa29.52■■■□□ 2.32
ABR-213ENST00000571543 KTN1Q86UP2 1357 aaKnown RBP29.52■■■□□ 2.32
ABR-213ENST00000571543 STRN4Q9NRL3 753 aa29.52■■■□□ 2.32
ABR-213ENST00000571543 ZRANB1Q9UGI0 708 aa29.52■■■□□ 2.32
ABR-213ENST00000571543 PIK3C2AO00443 1686 aa29.51■■■□□ 2.31
ABR-213ENST00000571543 DEFB132Q7Z7B7 95 aa29.51■■■□□ 2.31
ABR-213ENST00000571543 SLC12A5Q9H2X9 1139 aa29.5■■■□□ 2.31
ABR-213ENST00000571543 TNS1Q9HBL0 1735 aaKnown RBP29.5■■■□□ 2.31
ABR-213ENST00000571543 TTC21AQ8NDW8 1320 aa29.48■■■□□ 2.31
ABR-213ENST00000571543 EVA1CP58658 441 aa29.48■■■□□ 2.31
ABR-213ENST00000571543 PUS7Q96PZ0 661 aaKnown RBP29.48■■■□□ 2.31
ABR-213ENST00000571543 SLIT3O75094 1523 aa29.47■■■□□ 2.31
ABR-213ENST00000571543 CD163L1Q9NR16 1453 aa29.47■■■□□ 2.31
ABR-213ENST00000571543 CAMTA1Q9Y6Y1 1673 aa29.47■■■□□ 2.31
ABR-213ENST00000571543 ZBTB7CA1YPR0 619 aa29.46■■■□□ 2.31
ABR-213ENST00000571543 SF3B2Q13435 895 aaKnown RBP29.46■■■□□ 2.31
ABR-213ENST00000571543 CCER1Q8TC90 406 aaPredicted RBP29.46■■■□□ 2.31
ABR-213ENST00000571543 USP47Q96K76 1375 aa29.46■■■□□ 2.31
ABR-213ENST00000571543 SPATA31A1Q5TZJ5 1347 aa29.45■■■□□ 2.31
ABR-213ENST00000571543 SLC24A1O60721 1099 aa29.44■■■□□ 2.3
ABR-213ENST00000571543 HDGFL2Q7Z4V5 671 aaPredicted RBP29.44■■■□□ 2.3
ABR-213ENST00000571543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.44■■■□□ 2.3
ABR-213ENST00000571543 MON2Q7Z3U7 1717 aa29.44■■■□□ 2.3
ABR-213ENST00000571543 LARP1Q6PKG0 1096 aaKnown RBP29.42■■■□□ 2.3
ABR-213ENST00000571543 FAM182BQ5T319 152 aa29.41■■■□□ 2.3
ABR-213ENST00000571543 USP35Q9P2H5 1018 aa29.41■■■□□ 2.3
ABR-213ENST00000571543 SOX12O15370 315 aa29.4■■■□□ 2.3
ABR-213ENST00000571543 TERF2IPQ9NYB0 399 aa29.4■■■□□ 2.3
ABR-213ENST00000571543 KCNH5Q8NCM2 988 aa29.39■■■□□ 2.3
ABR-213ENST00000571543 A0A1W2PP64 1363 aa29.39■■■□□ 2.29
ABR-213ENST00000571543 AATKQ6ZMQ8 1374 aa29.39■■■□□ 2.29
ABR-213ENST00000571543 NME9Q86XW9 330 aa29.38■■■□□ 2.29
ABR-213ENST00000571543 COL18A1P39060 1754 aa29.36■■■□□ 2.29
ABR-213ENST00000571543 COL5A2P05997 1499 aaPredicted RBP29.36■■■□□ 2.29
ABR-213ENST00000571543 TMF1P82094 1093 aa29.36■■■□□ 2.29
ABR-213ENST00000571543 ARHGEF25Q86VW2 580 aa29.36■■■□□ 2.29
ABR-213ENST00000571543 PARP4Q9UKK3 1724 aaKnown RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms