RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 VDRP11473 427 aa10.9□□□□□ -0.66
TRIM25-203ENST00000570473 GSCP56915 257 aaPredicted RBP10.9□□□□□ -0.66
TRIM25-203ENST00000570473 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
TRIM25-203ENST00000570473 DEF6Q9H4E7 631 aa10.9□□□□□ -0.66
TRIM25-203ENST00000570473 UQCRHLA0A096LP55 91 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 ANKRD62A6NC57 917 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 SH3BP5O60239 455 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 UQCRHP07919 91 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRIM25-203ENST00000570473 FILIP1LQ4L180 1135 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 ACRBPQ8NEB7 543 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 IRF2BPLQ9H1B7 796 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 SUFUQ9UMX1 484 aa10.89□□□□□ -0.67
TRIM25-203ENST00000570473 PES1O00541 588 aaKnown RBP10.88□□□□□ -0.67
TRIM25-203ENST00000570473 CT47B1P0C2W7 299 aaPredicted RBP10.88□□□□□ -0.67
TRIM25-203ENST00000570473 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 BIRC2Q13490 618 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 AMOTQ4VCS5 1084 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 FAM184AQ8NB25 1140 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 AGAP3Q96P47 875 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 POLR3CQ9BUI4 534 aaPredicted RBP10.88□□□□□ -0.67
TRIM25-203ENST00000570473 RASSF4Q9H2L5 321 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 CXorf56Q9H5V9 222 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 UTP6Q9NYH9 597 aaKnown RBP10.88□□□□□ -0.67
TRIM25-203ENST00000570473 COMMD10Q9Y6G5 202 aa10.88□□□□□ -0.67
TRIM25-203ENST00000570473 PPFIA2O75334 1257 aa10.87□□□□□ -0.67
TRIM25-203ENST00000570473 MSNP26038 577 aaKnown RBP10.87□□□□□ -0.67
TRIM25-203ENST00000570473 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
TRIM25-203ENST00000570473 ZSCAN26Q16670 478 aa10.87□□□□□ -0.67
TRIM25-203ENST00000570473 ANKRD13BQ86YJ7 626 aa10.87□□□□□ -0.67
TRIM25-203ENST00000570473 SYAP1Q96A49 352 aaPredicted RBP10.87□□□□□ -0.67
TRIM25-203ENST00000570473 MAF1Q9H063 256 aa10.87□□□□□ -0.67
TRIM25-203ENST00000570473 UPF2Q9HAU5 1272 aaKnown RBP10.87□□□□□ -0.67
TRIM25-203ENST00000570473 BICDL2A1A5D9 508 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 UNCXA6NJT0 531 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 GTF2F1P35269 517 aaKnown RBP eCLIP10.86□□□□□ -0.673e-13■■■■■ 53.6
TRIM25-203ENST00000570473 FLT3P36888 993 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 TRAF1Q13077 416 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 BECN1Q14457 450 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 SF3A1Q15459 793 aaKnown RBP10.86□□□□□ -0.67
TRIM25-203ENST00000570473 NLRP13Q86W25 1043 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 PRIMPOLQ96LW4 560 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 DNAJC5BQ9UF47 199 aa10.86□□□□□ -0.67
TRIM25-203ENST00000570473 IPO5O00410 1097 aaKnown RBP10.85□□□□□ -0.67
TRIM25-203ENST00000570473 HMMRO75330 724 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 HDLBPQ00341 1268 aaKnown RBP10.85□□□□□ -0.67
TRIM25-203ENST00000570473 CCDC173Q0VFZ6 552 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 TMED1Q13445 227 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 AMOTL1Q8IY63 956 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 SAMD3Q8N6K7 520 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 OGFRQ9NZT2 677 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 IBTKQ9P2D0 1353 aaPredicted RBP10.85□□□□□ -0.67
TRIM25-203ENST00000570473 SMARCA2P51531 1590 aa10.85□□□□□ -0.67
TRIM25-203ENST00000570473 CREB3O43889 395 aa10.84□□□□□ -0.67
TRIM25-203ENST00000570473 KIF5CO60282 957 aa10.84□□□□□ -0.67
TRIM25-203ENST00000570473 KIF4AO95239 1232 aa10.84□□□□□ -0.67
TRIM25-203ENST00000570473 MICAL1Q8TDZ2 1067 aa10.84□□□□□ -0.67
TRIM25-203ENST00000570473 RMDN2Q96LZ7 410 aa10.84□□□□□ -0.67
TRIM25-203ENST00000570473 NOL10Q9BSC4 688 aaKnown RBP10.84□□□□□ -0.67
TRIM25-203ENST00000570473 CCT2P78371 535 aaKnown RBP10.83□□□□□ -0.68
TRIM25-203ENST00000570473 KCNA1Q09470 495 aa10.83□□□□□ -0.68
TRIM25-203ENST00000570473 MCM6Q14566 821 aa10.83□□□□□ -0.68
TRIM25-203ENST00000570473 NUTM1Q86Y26 1132 aa10.83□□□□□ -0.68
TRIM25-203ENST00000570473 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
TRIM25-203ENST00000570473 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
TRIM25-203ENST00000570473 LZTS2Q9BRK4 669 aa10.83□□□□□ -0.68
TRIM25-203ENST00000570473 TPX2Q9ULW0 747 aaKnown RBP10.83□□□□□ -0.68
TRIM25-203ENST00000570473 KANK1Q14678 1352 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 STK10O94804 968 aaKnown RBP10.82□□□□□ -0.68
TRIM25-203ENST00000570473 APLP1P51693 650 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 CHAF1AQ13111 956 aaPredicted RBP10.82□□□□□ -0.68
TRIM25-203ENST00000570473 PDCD2Q16342 344 aaPredicted RBP10.82□□□□□ -0.68
TRIM25-203ENST00000570473 CCDC73Q6ZRK6 1079 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 IQCGQ9H095 443 aaKnown RBP10.82□□□□□ -0.68
TRIM25-203ENST00000570473 PNMA2Q9UL42 364 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 TBC1D2BQ9UPU7 963 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 ERBB3P21860 1342 aa10.82□□□□□ -0.68
TRIM25-203ENST00000570473 TMCO5BA8MYB1 307 aa10.81□□□□□ -0.68
TRIM25-203ENST00000570473 RASA3Q14644 834 aa10.81□□□□□ -0.68
TRIM25-203ENST00000570473 MMTAG2Q9BU76 263 aaKnown RBP10.81□□□□□ -0.68
TRIM25-203ENST00000570473 C22orf23Q9BZE7 217 aa10.81□□□□□ -0.68
TRIM25-203ENST00000570473 ETAA1Q9NY74 926 aa10.81□□□□□ -0.68
TRIM25-203ENST00000570473 RSPH14Q9UHP6 348 aa10.81□□□□□ -0.68
TRIM25-203ENST00000570473 POU5F1Q01860 360 aaKnown RBP10.8□□□□□ -0.68
TRIM25-203ENST00000570473 IFT88Q13099 833 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 OTUD6AQ7L8S5 288 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 CATIPQ7Z7H3 387 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 CCDC102AQ96A19 550 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 ZNF396Q96N95 335 aaPredicted RBP10.8□□□□□ -0.68
TRIM25-203ENST00000570473 PPP1R9BQ96SB3 815 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 VEZTQ9HBM0 779 aa10.8□□□□□ -0.68
TRIM25-203ENST00000570473 DHX29Q7Z478 1369 aaKnown RBP10.79□□□□□ -0.68
TRIM25-203ENST00000570473 SCAPERQ9BY12 1400 aa10.79□□□□□ -0.68
TRIM25-203ENST00000570473 HTATSF1O43719 755 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms