RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 HAP1P54257 671 aaPredicted RBP24.58■■□□□ 1.53
MAP1LC3B-208ENST00000570189 LMOD2Q6P5Q4 547 aa24.57■■□□□ 1.52
MAP1LC3B-208ENST00000570189 PHRF1Q9P1Y6 1649 aaKnown RBP24.57■■□□□ 1.52
MAP1LC3B-208ENST00000570189 ATAD2Q6PL18 1390 aa24.56■■□□□ 1.52
MAP1LC3B-208ENST00000570189 VPS72Q15906 364 aa24.55■■□□□ 1.52
MAP1LC3B-208ENST00000570189 EP400Q96L91 3159 aa24.55■■□□□ 1.52
MAP1LC3B-208ENST00000570189 BRD4O60885 1362 aaPredicted RBP24.54■■□□□ 1.52
MAP1LC3B-208ENST00000570189 ACEP12821 1306 aa24.54■■□□□ 1.52
MAP1LC3B-208ENST00000570189 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
MAP1LC3B-208ENST00000570189 FAM83GA6ND36 823 aa24.52■■□□□ 1.52
MAP1LC3B-208ENST00000570189 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
MAP1LC3B-208ENST00000570189 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
MAP1LC3B-208ENST00000570189 NBPF8Q3BBV2 869 aa24.52■■□□□ 1.52
MAP1LC3B-208ENST00000570189 BRWD3Q6RI45 1802 aa24.51■■□□□ 1.51
MAP1LC3B-208ENST00000570189 PPIP5K1Q6PFW1 1433 aa24.51■■□□□ 1.51
MAP1LC3B-208ENST00000570189 ONECUT3O60422 494 aaPredicted RBP24.5■■□□□ 1.51
MAP1LC3B-208ENST00000570189 SBNO2Q9Y2G9 1366 aa24.49■■□□□ 1.51
MAP1LC3B-208ENST00000570189 PAK3O75914 559 aaPredicted RBP24.48■■□□□ 1.51
MAP1LC3B-208ENST00000570189 SRPK2P78362 688 aaKnown RBP24.48■■□□□ 1.51
MAP1LC3B-208ENST00000570189 NRKQ7Z2Y5 1582 aa24.46■■□□□ 1.51
MAP1LC3B-208ENST00000570189 EVC2Q86UK5 1308 aa24.46■■□□□ 1.51
MAP1LC3B-208ENST00000570189 CABP2Q9NPB3 220 aa24.45■■□□□ 1.5
MAP1LC3B-208ENST00000570189 AKAP12Q02952 1782 aa24.44■■□□□ 1.5
MAP1LC3B-208ENST00000570189 USP19O94966 1318 aa24.44■■□□□ 1.5
MAP1LC3B-208ENST00000570189 CCDC125Q86Z20 511 aa24.43■■□□□ 1.5
MAP1LC3B-208ENST00000570189 BTG4Q9NY30 223 aa24.43■■□□□ 1.5
MAP1LC3B-208ENST00000570189 USP6P35125 1406 aa24.43■■□□□ 1.5
MAP1LC3B-208ENST00000570189 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
MAP1LC3B-208ENST00000570189 SSH2Q76I76 1423 aa24.42■■□□□ 1.5
MAP1LC3B-208ENST00000570189 CPDO75976 1380 aa24.42■■□□□ 1.5
MAP1LC3B-208ENST00000570189 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
MAP1LC3B-208ENST00000570189 KIAA0232Q92628 1395 aa24.41■■□□□ 1.5
MAP1LC3B-208ENST00000570189 LMO7Q8WWI1 1683 aa24.4■■□□□ 1.5
MAP1LC3B-208ENST00000570189 PRDM11Q9NQV5 511 aa24.4■■□□□ 1.5
MAP1LC3B-208ENST00000570189 THSD7AQ9UPZ6 1657 aa24.4■■□□□ 1.5
MAP1LC3B-208ENST00000570189 ABTB2Q8N961 1025 aa24.39■■□□□ 1.49
MAP1LC3B-208ENST00000570189 CABP1Q9NZU7 370 aa24.39■■□□□ 1.49
MAP1LC3B-208ENST00000570189 SEPT12Q8IYM1 358 aa24.38■■□□□ 1.49
MAP1LC3B-208ENST00000570189 SPATA31A5Q5VU36 1347 aa24.37■■□□□ 1.49
MAP1LC3B-208ENST00000570189 SPATA31A7Q8IWB4 1347 aa24.37■■□□□ 1.49
MAP1LC3B-208ENST00000570189 PIK3C2AO00443 1686 aa24.37■■□□□ 1.49
MAP1LC3B-208ENST00000570189 SLIT3O75094 1523 aa24.37■■□□□ 1.49
MAP1LC3B-208ENST00000570189 NLRP13Q86W25 1043 aa24.36■■□□□ 1.49
MAP1LC3B-208ENST00000570189 MON2Q7Z3U7 1717 aa24.35■■□□□ 1.49
MAP1LC3B-208ENST00000570189 BLMP54132 1417 aaPredicted RBP24.35■■□□□ 1.49
MAP1LC3B-208ENST00000570189 CPSF1Q10570 1443 aaKnown RBP24.35■■□□□ 1.49
MAP1LC3B-208ENST00000570189 ZNF692Q9BU19 519 aaPredicted RBP24.34■■□□□ 1.49
MAP1LC3B-208ENST00000570189 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
MAP1LC3B-208ENST00000570189 CCDC9Q9Y3X0 531 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3B-208ENST00000570189 NUTM2GQ5VZR2 741 aa24.33■■□□□ 1.49
MAP1LC3B-208ENST00000570189 USP54Q70EL1 1684 aa24.32■■□□□ 1.48
MAP1LC3B-208ENST00000570189 CAMTA1Q9Y6Y1 1673 aa24.32■■□□□ 1.48
MAP1LC3B-208ENST00000570189 GCP02774 474 aa24.31■■□□□ 1.48
MAP1LC3B-208ENST00000570189 KRT27Q7Z3Y8 459 aa24.31■■□□□ 1.48
MAP1LC3B-208ENST00000570189 SPATA31A1Q5TZJ5 1347 aa24.31■■□□□ 1.48
MAP1LC3B-208ENST00000570189 PUS7Q96PZ0 661 aaKnown RBP24.3■■□□□ 1.48
MAP1LC3B-208ENST00000570189 ZC3H6P61129 1189 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3B-208ENST00000570189 CHRNA2Q15822 529 aa24.29■■□□□ 1.48
MAP1LC3B-208ENST00000570189 FAM98CQ17RN3 349 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3B-208ENST00000570189 COL18A1P39060 1754 aa24.28■■□□□ 1.48
MAP1LC3B-208ENST00000570189 TTC21AQ8NDW8 1320 aa24.28■■□□□ 1.48
MAP1LC3B-208ENST00000570189 TTC21BQ7Z4L5 1316 aa24.26■■□□□ 1.47
MAP1LC3B-208ENST00000570189 NLRP6P59044 892 aa24.25■■□□□ 1.47
MAP1LC3B-208ENST00000570189 AATKQ6ZMQ8 1374 aa24.25■■□□□ 1.47
MAP1LC3B-208ENST00000570189 COL5A2P05997 1499 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3B-208ENST00000570189 CD163L1Q9NR16 1453 aa24.25■■□□□ 1.47
MAP1LC3B-208ENST00000570189 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
MAP1LC3B-208ENST00000570189 BARGINQ6ZT62 677 aa24.24■■□□□ 1.47
MAP1LC3B-208ENST00000570189 ABCC6O95255 1503 aa24.24■■□□□ 1.47
MAP1LC3B-208ENST00000570189 SLC24A1O60721 1099 aa24.23■■□□□ 1.47
MAP1LC3B-208ENST00000570189 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
MAP1LC3B-208ENST00000570189 PARP4Q9UKK3 1724 aaKnown RBP24.22■■□□□ 1.47
MAP1LC3B-208ENST00000570189 KTN1Q86UP2 1357 aaKnown RBP24.22■■□□□ 1.47
MAP1LC3B-208ENST00000570189 NFAT5O94916 1531 aa24.2■■□□□ 1.47
MAP1LC3B-208ENST00000570189 USP31Q70CQ4 1352 aa24.2■■□□□ 1.46
MAP1LC3B-208ENST00000570189 TESK2Q96S53 571 aa24.2■■□□□ 1.46
MAP1LC3B-208ENST00000570189 STRN4Q9NRL3 753 aa24.2■■□□□ 1.46
MAP1LC3B-208ENST00000570189 THRAP3Q9Y2W1 955 aaKnown RBP24.2■■□□□ 1.46
MAP1LC3B-208ENST00000570189 NINLQ9Y2I6 1382 aa24.19■■□□□ 1.46
MAP1LC3B-208ENST00000570189 TNS1Q9HBL0 1735 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3B-208ENST00000570189 KCNH5Q8NCM2 988 aa24.19■■□□□ 1.46
MAP1LC3B-208ENST00000570189 TIMELESSQ9UNS1 1208 aa24.19■■□□□ 1.46
MAP1LC3B-208ENST00000570189 A0A0G2JS52 829 aa24.18■■□□□ 1.46
MAP1LC3B-208ENST00000570189 EVA1CP58658 441 aa24.18■■□□□ 1.46
MAP1LC3B-208ENST00000570189 MYT1Q01538 1121 aa24.18■■□□□ 1.46
MAP1LC3B-208ENST00000570189 CRB1P82279 1406 aa24.18■■□□□ 1.46
MAP1LC3B-208ENST00000570189 WNK3Q9BYP7 1800 aa24.17■■□□□ 1.46
MAP1LC3B-208ENST00000570189 LARP1Q6PKG0 1096 aaKnown RBP24.17■■□□□ 1.46
MAP1LC3B-208ENST00000570189 DISP2A7MBM2 1401 aa24.17■■□□□ 1.46
MAP1LC3B-208ENST00000570189 RGPD5Q99666 1765 aa24.16■■□□□ 1.46
MAP1LC3B-208ENST00000570189 SF3B2Q13435 895 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3B-208ENST00000570189 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
MAP1LC3B-208ENST00000570189 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
MAP1LC3B-208ENST00000570189 EDC4Q6P2E9 1401 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3B-208ENST00000570189 ZRANB1Q9UGI0 708 aa24.14■■□□□ 1.45
MAP1LC3B-208ENST00000570189 ST20-MTHFSA0A0A6YYL1 179 aa24.13■■□□□ 1.45
MAP1LC3B-208ENST00000570189 HDGFL2Q7Z4V5 671 aaPredicted RBP24.12■■□□□ 1.45
MAP1LC3B-208ENST00000570189 TERF2IPQ9NYB0 399 aa24.12■■□□□ 1.45
MAP1LC3B-208ENST00000570189 A0A1W2PP64 1363 aa24.12■■□□□ 1.45
MAP1LC3B-208ENST00000570189 SLC12A5Q9H2X9 1139 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms