RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 CNNM1Q9NRU3 951 aa20.32■□□□□ 0.84
E4F1-209ENST00000569796 GNAI3P08754 354 aa20.32■□□□□ 0.84
E4F1-209ENST00000569796 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
E4F1-209ENST00000569796 NUTM2BA6NNL0 878 aaPredicted RBP20.31■□□□□ 0.84
E4F1-209ENST00000569796 NUTM2EB1AL46 878 aaPredicted RBP20.31■□□□□ 0.84
E4F1-209ENST00000569796 NUTM2AQ8IVF1 878 aaPredicted RBP20.31■□□□□ 0.84
E4F1-209ENST00000569796 SMG6Q86US8 1419 aaKnown RBP20.31■□□□□ 0.84
E4F1-209ENST00000569796 WWC2Q6AWC2 1192 aa20.3■□□□□ 0.84
E4F1-209ENST00000569796 CCDC173Q0VFZ6 552 aa20.3■□□□□ 0.84
E4F1-209ENST00000569796 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
E4F1-209ENST00000569796 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
E4F1-209ENST00000569796 CDK5RAP3Q96JB5 506 aa20.3■□□□□ 0.84
E4F1-209ENST00000569796 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
E4F1-209ENST00000569796 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
E4F1-209ENST00000569796 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
E4F1-209ENST00000569796 TATP17735 454 aaPredicted RBP20.29■□□□□ 0.84
E4F1-209ENST00000569796 SF3B2Q13435 895 aaKnown RBP20.29■□□□□ 0.84
E4F1-209ENST00000569796 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
E4F1-209ENST00000569796 MRE11P49959 708 aa20.28■□□□□ 0.84
E4F1-209ENST00000569796 HIP1O00291 1037 aa20.28■□□□□ 0.84
E4F1-209ENST00000569796 CFAP70Q5T0N1 1121 aa20.28■□□□□ 0.84
E4F1-209ENST00000569796 PODXL2Q9NZ53 605 aa20.28■□□□□ 0.84
E4F1-209ENST00000569796 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
E4F1-209ENST00000569796 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
E4F1-209ENST00000569796 PAF1Q8N7H5 531 aa20.27■□□□□ 0.84
E4F1-209ENST00000569796 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.83
E4F1-209ENST00000569796 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.83
E4F1-209ENST00000569796 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.83
E4F1-209ENST00000569796 ANKRD50Q9ULJ7 1429 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 CAGE1Q8TC20 777 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 ERCC4Q92889 916 aaPredicted RBP20.26■□□□□ 0.83
E4F1-209ENST00000569796 PRAM1Q96QH2 718 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 C1orf115Q9H7X2 142 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 ARHGAP5Q13017 1502 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 CCDC158Q5M9N0 1113 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
E4F1-209ENST00000569796 KRT18P05783 430 aaKnown RBP20.25■□□□□ 0.83
E4F1-209ENST00000569796 NFKBIBQ15653 356 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 ERC1Q8IUD2 1116 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 PLCD4Q9BRC7 762 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 GNL3LQ9NVN8 582 aaKnown RBP20.25■□□□□ 0.83
E4F1-209ENST00000569796 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 CABP4P57796 275 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 TOM1L2Q6ZVM7 507 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
E4F1-209ENST00000569796 FGD6Q6ZV73 1430 aa20.24■□□□□ 0.83
E4F1-209ENST00000569796 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
E4F1-209ENST00000569796 TWISTNBQ3B726 338 aaPredicted RBP20.24■□□□□ 0.83
E4F1-209ENST00000569796 FYCO1Q9BQS8 1478 aa20.24■□□□□ 0.83
E4F1-209ENST00000569796 MYO6Q9UM54 1294 aa20.24■□□□□ 0.83
E4F1-209ENST00000569796 RRBP1Q9P2E9 1410 aaKnown RBP20.24■□□□□ 0.83
E4F1-209ENST00000569796 LETM1O95202 739 aaPredicted RBP20.24■□□□□ 0.83
E4F1-209ENST00000569796 EXOSC9Q06265 439 aaKnown RBP20.24■□□□□ 0.83
E4F1-209ENST00000569796 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
E4F1-209ENST00000569796 TXLNAP40222 546 aa20.23■□□□□ 0.83
E4F1-209ENST00000569796 LEKR1Q6ZMV7 388 aa20.23■□□□□ 0.83
E4F1-209ENST00000569796 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
E4F1-209ENST00000569796 MAGEC2Q9UBF1 373 aaPredicted RBP20.22■□□□□ 0.83
E4F1-209ENST00000569796 SIL1Q9H173 461 aa20.22■□□□□ 0.83
E4F1-209ENST00000569796 RBM10P98175 930 aaKnown RBP20.22■□□□□ 0.83
E4F1-209ENST00000569796 HDGFL1Q5TGJ6 251 aa20.22■□□□□ 0.83
E4F1-209ENST00000569796 NEK4P51957 841 aa20.21■□□□□ 0.83
E4F1-209ENST00000569796 GNAI2P04899 355 aa20.21■□□□□ 0.83
E4F1-209ENST00000569796 FMNL2Q96PY5 1086 aa20.21■□□□□ 0.83
E4F1-209ENST00000569796 TSPYL1Q9H0U9 437 aa20.21■□□□□ 0.83
E4F1-209ENST00000569796 KINO60870 393 aaKnown RBP20.21■□□□□ 0.83
E4F1-209ENST00000569796 BRPF1P55201 1214 aaPredicted RBP20.21■□□□□ 0.83
E4F1-209ENST00000569796 SMC2O95347 1197 aa20.21■□□□□ 0.83
E4F1-209ENST00000569796 CEBPZQ03701 1054 aaKnown RBP20.21■□□□□ 0.83
E4F1-209ENST00000569796 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.2■□□□□ 0.825e-7■■■□□ 16
E4F1-209ENST00000569796 RBM5P52756 815 aaKnown RBP eCLIP20.2■□□□□ 0.82
E4F1-209ENST00000569796 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
E4F1-209ENST00000569796 FILIP1LQ4L180 1135 aa20.2■□□□□ 0.82
E4F1-209ENST00000569796 SMARCE1Q969G3 411 aa20.2■□□□□ 0.82
E4F1-209ENST00000569796 SULT6B1Q6IMI4 303 aa20.19■□□□□ 0.82
E4F1-209ENST00000569796 ZNF396Q96N95 335 aaPredicted RBP20.19■□□□□ 0.82
E4F1-209ENST00000569796 MYL6BP14649 208 aa20.19■□□□□ 0.82
E4F1-209ENST00000569796 SYCP1Q15431 976 aa20.19■□□□□ 0.82
E4F1-209ENST00000569796 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
E4F1-209ENST00000569796 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.826e-7■■■■■ 73.8
E4F1-209ENST00000569796 TRIM5Q9C035 493 aa20.18■□□□□ 0.82
E4F1-209ENST00000569796 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
E4F1-209ENST00000569796 STK38Q15208 465 aa20.18■□□□□ 0.82
E4F1-209ENST00000569796 PIP4K2AP48426 406 aaPredicted RBP20.17■□□□□ 0.82
E4F1-209ENST00000569796 SKIDA1Q1XH10 827 aa20.17■□□□□ 0.82
E4F1-209ENST00000569796 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
E4F1-209ENST00000569796 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
E4F1-209ENST00000569796 IGF1RP08069 1367 aa20.17■□□□□ 0.82
E4F1-209ENST00000569796 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
E4F1-209ENST00000569796 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 CDK19Q9BWU1 502 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 BRPF3Q9ULD4 1205 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 STK3Q13188 491 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 MPHOSPH8Q99549 860 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 PDCP20941 246 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 MCM2P49736 904 aa20.16■□□□□ 0.82
E4F1-209ENST00000569796 THEMISQ8N1K5 641 aaPredicted RBP20.16■□□□□ 0.82
E4F1-209ENST00000569796 NACAP1Q9BZK3 213 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms