RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 HAP1P54257 671 aaPredicted RBP20.13■□□□□ 0.81
GTF3C1-211ENST00000569653 VPS72Q15906 364 aa20.13■□□□□ 0.81
GTF3C1-211ENST00000569653 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
GTF3C1-211ENST00000569653 SRCAPQ6ZRS2 3230 aa20.12■□□□□ 0.81
GTF3C1-211ENST00000569653 POLR3AO14802 1390 aaPredicted RBP20.11■□□□□ 0.81
GTF3C1-211ENST00000569653 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
GTF3C1-211ENST00000569653 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
GTF3C1-211ENST00000569653 ACEP12821 1306 aa20.07■□□□□ 0.8
GTF3C1-211ENST00000569653 ONECUT3O60422 494 aaPredicted RBP20.07■□□□□ 0.8
GTF3C1-211ENST00000569653 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
GTF3C1-211ENST00000569653 SEPT12Q8IYM1 358 aa20.07■□□□□ 0.8
GTF3C1-211ENST00000569653 BTG4Q9NY30 223 aa20.07■□□□□ 0.8
GTF3C1-211ENST00000569653 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
GTF3C1-211ENST00000569653 PLEKHG3A1L390 1219 aa20.06■□□□□ 0.8
GTF3C1-211ENST00000569653 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
GTF3C1-211ENST00000569653 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
GTF3C1-211ENST00000569653 CCDC61Q9Y6R9 512 aa20.05■□□□□ 0.8
GTF3C1-211ENST00000569653 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
GTF3C1-211ENST00000569653 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
GTF3C1-211ENST00000569653 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
GTF3C1-211ENST00000569653 PPIP5K1Q6PFW1 1433 aa20.03■□□□□ 0.8
GTF3C1-211ENST00000569653 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
GTF3C1-211ENST00000569653 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
GTF3C1-211ENST00000569653 LMO7Q8WWI1 1683 aa20.02■□□□□ 0.8
GTF3C1-211ENST00000569653 CHRNA2Q15822 529 aa20.01■□□□□ 0.79
GTF3C1-211ENST00000569653 BLMP54132 1417 aaPredicted RBP20.01■□□□□ 0.79
GTF3C1-211ENST00000569653 NEUROD1Q13562 356 aa20■□□□□ 0.79
GTF3C1-211ENST00000569653 FAM98CQ17RN3 349 aaKnown RBP20■□□□□ 0.79
GTF3C1-211ENST00000569653 PRDM11Q9NQV5 511 aa20■□□□□ 0.79
GTF3C1-211ENST00000569653 SPATA31A5Q5VU36 1347 aa20■□□□□ 0.79
GTF3C1-211ENST00000569653 SPATA31A7Q8IWB4 1347 aa20■□□□□ 0.79
GTF3C1-211ENST00000569653 USP19O94966 1318 aa19.99■□□□□ 0.79
GTF3C1-211ENST00000569653 CAMTA1Q9Y6Y1 1673 aa19.98■□□□□ 0.79
GTF3C1-211ENST00000569653 SRPK2P78362 688 aaKnown RBP19.98■□□□□ 0.79
GTF3C1-211ENST00000569653 KRT27Q7Z3Y8 459 aa19.98■□□□□ 0.79
GTF3C1-211ENST00000569653 DEFB132Q7Z7B7 95 aa19.98■□□□□ 0.79
GTF3C1-211ENST00000569653 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
GTF3C1-211ENST00000569653 ZC3H6P61129 1189 aaKnown RBP19.97■□□□□ 0.79
GTF3C1-211ENST00000569653 CCDC125Q86Z20 511 aa19.97■□□□□ 0.79
GTF3C1-211ENST00000569653 AKAP12Q02952 1782 aa19.96■□□□□ 0.79
GTF3C1-211ENST00000569653 SSH2Q76I76 1423 aa19.96■□□□□ 0.79
GTF3C1-211ENST00000569653 USP6P35125 1406 aa19.95■□□□□ 0.78
GTF3C1-211ENST00000569653 TNS1Q9HBL0 1735 aaKnown RBP19.95■□□□□ 0.78
GTF3C1-211ENST00000569653 FAM182BQ5T319 152 aa19.94■□□□□ 0.78
GTF3C1-211ENST00000569653 CABP1Q9NZU7 370 aa19.94■□□□□ 0.78
GTF3C1-211ENST00000569653 SPATA31A1Q5TZJ5 1347 aa19.94■□□□□ 0.78
GTF3C1-211ENST00000569653 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
GTF3C1-211ENST00000569653 ABTB2Q8N961 1025 aa19.93■□□□□ 0.78
GTF3C1-211ENST00000569653 CPDO75976 1380 aa19.93■□□□□ 0.78
GTF3C1-211ENST00000569653 SLIT3O75094 1523 aa19.92■□□□□ 0.78
GTF3C1-211ENST00000569653 COL18A1P39060 1754 aa19.92■□□□□ 0.78
GTF3C1-211ENST00000569653 RGPD1P0DJD0 1748 aa19.91■□□□□ 0.78
GTF3C1-211ENST00000569653 A0A0G2JS52 829 aa19.91■□□□□ 0.78
GTF3C1-211ENST00000569653 MYT1Q01538 1121 aa19.91■□□□□ 0.78
GTF3C1-211ENST00000569653 STRN4Q9NRL3 753 aa19.91■□□□□ 0.78
GTF3C1-211ENST00000569653 MON2Q7Z3U7 1717 aa19.88■□□□□ 0.77
GTF3C1-211ENST00000569653 COL5A2P05997 1499 aaPredicted RBP19.88■□□□□ 0.77
GTF3C1-211ENST00000569653 EVC2Q86UK5 1308 aa19.88■□□□□ 0.77
GTF3C1-211ENST00000569653 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
GTF3C1-211ENST00000569653 GCP02774 474 aa19.87■□□□□ 0.77
GTF3C1-211ENST00000569653 ZRANB1Q9UGI0 708 aa19.87■□□□□ 0.77
GTF3C1-211ENST00000569653 RGPD5Q99666 1765 aa19.87■□□□□ 0.77
GTF3C1-211ENST00000569653 BRD4O60885 1362 aaPredicted RBP19.86■□□□□ 0.77
GTF3C1-211ENST00000569653 NLRP13Q86W25 1043 aa19.85■□□□□ 0.77
GTF3C1-211ENST00000569653 USP35Q9P2H5 1018 aa19.85■□□□□ 0.77
GTF3C1-211ENST00000569653 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
GTF3C1-211ENST00000569653 PARP4Q9UKK3 1724 aaKnown RBP19.84■□□□□ 0.77
GTF3C1-211ENST00000569653 CD163L1Q9NR16 1453 aa19.84■□□□□ 0.77
GTF3C1-211ENST00000569653 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.77
GTF3C1-211ENST00000569653 WNK3Q9BYP7 1800 aa19.83■□□□□ 0.77
GTF3C1-211ENST00000569653 NLRP6P59044 892 aa19.83■□□□□ 0.77
GTF3C1-211ENST00000569653 NFAT5O94916 1531 aa19.82■□□□□ 0.76
GTF3C1-211ENST00000569653 TTC21BQ7Z4L5 1316 aa19.81■□□□□ 0.76
GTF3C1-211ENST00000569653 SF3B2Q13435 895 aaKnown RBP19.81■□□□□ 0.76
GTF3C1-211ENST00000569653 BARGINQ6ZT62 677 aa19.81■□□□□ 0.76
GTF3C1-211ENST00000569653 DISP2A7MBM2 1401 aa19.81■□□□□ 0.76
GTF3C1-211ENST00000569653 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
GTF3C1-211ENST00000569653 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
GTF3C1-211ENST00000569653 PEAK1Q9H792 1746 aa19.8■□□□□ 0.76
GTF3C1-211ENST00000569653 EVA1CP58658 441 aa19.8■□□□□ 0.76
GTF3C1-211ENST00000569653 EN1Q05925 392 aaPredicted RBP19.8■□□□□ 0.76
GTF3C1-211ENST00000569653 LRRC37A3O60309 1634 aa19.8■□□□□ 0.76
GTF3C1-211ENST00000569653 AXIN2Q9Y2T1 843 aa19.79■□□□□ 0.76
GTF3C1-211ENST00000569653 TCP11L2Q8N4U5 519 aa19.78■□□□□ 0.76
GTF3C1-211ENST00000569653 CARD11Q9BXL7 1154 aa19.78■□□□□ 0.76
GTF3C1-211ENST00000569653 SBF2Q86WG5 1849 aa19.77■□□□□ 0.76
GTF3C1-211ENST00000569653 ZBTB7CA1YPR0 619 aa19.77■□□□□ 0.76
GTF3C1-211ENST00000569653 BAG6P46379 1132 aa19.77■□□□□ 0.76
GTF3C1-211ENST00000569653 TONSLQ96HA7 1378 aa19.77■□□□□ 0.76
GTF3C1-211ENST00000569653 RREB1Q92766 1687 aa19.77■□□□□ 0.76
GTF3C1-211ENST00000569653 CRB1P82279 1406 aa19.76■□□□□ 0.75
GTF3C1-211ENST00000569653 TRIM37O94972 964 aa19.76■□□□□ 0.75
GTF3C1-211ENST00000569653 LRP5O75197 1615 aa19.76■□□□□ 0.75
GTF3C1-211ENST00000569653 KTN1Q86UP2 1357 aaKnown RBP19.75■□□□□ 0.75
GTF3C1-211ENST00000569653 PSDA5PKW4 1024 aaPredicted RBP19.75■□□□□ 0.75
GTF3C1-211ENST00000569653 ARHGEF25Q86VW2 580 aa19.75■□□□□ 0.75
GTF3C1-211ENST00000569653 NUP188Q5SRE5 1749 aa19.75■□□□□ 0.75
GTF3C1-211ENST00000569653 TTC21AQ8NDW8 1320 aa19.74■□□□□ 0.75
GTF3C1-211ENST00000569653 LTN1O94822 1766 aa19.73■□□□□ 0.75
GTF3C1-211ENST00000569653 SOX12O15370 315 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms