RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 EGFL6Q8IUX8 553 aa8.16□□□□□ -1.1
KARS-211ENST00000569298 LRCH3Q96II8 777 aa8.16□□□□□ -1.1
KARS-211ENST00000569298 RBM28Q9NW13 759 aaKnown RBP8.16□□□□□ -1.1
KARS-211ENST00000569298 BSDC1Q9NW68 430 aaPredicted RBP8.16□□□□□ -1.1
KARS-211ENST00000569298 SLC52A1Q9NWF4 448 aa8.16□□□□□ -1.1
KARS-211ENST00000569298 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
KARS-211ENST00000569298 PNMA3Q9UL41 463 aa8.16□□□□□ -1.1
KARS-211ENST00000569298 NINLQ9Y2I6 1382 aa8.16□□□□□ -1.1
KARS-211ENST00000569298 PTGDRQ13258 359 aa8.15□□□□□ -1.1
KARS-211ENST00000569298 PADI6Q6TGC4 694 aa8.15□□□□□ -1.1
KARS-211ENST00000569298 NUDT18Q6ZVK8 323 aa8.15□□□□□ -1.1
KARS-211ENST00000569298 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.1
KARS-211ENST00000569298 WBP1LQ9NX94 342 aa8.15□□□□□ -1.1
KARS-211ENST00000569298 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
KARS-211ENST00000569298 VGLL3A8MV65 326 aa8.14□□□□□ -1.11
KARS-211ENST00000569298 TULP2O00295 520 aa8.14□□□□□ -1.11
KARS-211ENST00000569298 TRIM66O15016 1216 aa8.14□□□□□ -1.11
KARS-211ENST00000569298 MCM5P33992 734 aa8.14□□□□□ -1.11
KARS-211ENST00000569298 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
KARS-211ENST00000569298 SMG6Q86US8 1419 aaKnown RBP8.13□□□□□ -1.11
KARS-211ENST00000569298 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
KARS-211ENST00000569298 FAM43BQ6ZT52 329 aaPredicted RBP8.13□□□□□ -1.11
KARS-211ENST00000569298 SAMD7Q7Z3H4 446 aa8.13□□□□□ -1.11
KARS-211ENST00000569298 ZSCAN30Q86W11 494 aa8.13□□□□□ -1.11
KARS-211ENST00000569298 HPS5Q9UPZ3 1129 aa8.13□□□□□ -1.11
KARS-211ENST00000569298 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
KARS-211ENST00000569298 RAD50Q92878 1312 aa8.12□□□□□ -1.11
KARS-211ENST00000569298 GPR37O15354 613 aa8.12□□□□□ -1.11
KARS-211ENST00000569298 ZNF500O60304 480 aaPredicted RBP8.12□□□□□ -1.11
KARS-211ENST00000569298 IGSF3O75054 1194 aa8.12□□□□□ -1.11
KARS-211ENST00000569298 FRAT2O75474 233 aaPredicted RBP8.12□□□□□ -1.11
KARS-211ENST00000569298 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
KARS-211ENST00000569298 SATB1Q01826 763 aa8.12□□□□□ -1.11
KARS-211ENST00000569298 GABPB1Q06547 395 aaPredicted RBP8.12□□□□□ -1.11
KARS-211ENST00000569298 PDE4DQ08499 809 aa8.12□□□□□ -1.11
KARS-211ENST00000569298 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
KARS-211ENST00000569298 MINK1Q8N4C8 1332 aaPredicted RBP8.11□□□□□ -1.11
KARS-211ENST00000569298 MFAP1P55081 439 aaKnown RBP8.11□□□□□ -1.11
KARS-211ENST00000569298 HNRNPUQ00839 825 aaKnown RBP eCLIP8.11□□□□□ -1.11
KARS-211ENST00000569298 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
KARS-211ENST00000569298 CUX2O14529 1486 aa8.11□□□□□ -1.11
KARS-211ENST00000569298 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 FCHSD2O94868 740 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 ANAPC15P60006 121 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 MAP2K5Q13163 448 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 CASC1Q6TDU7 716 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 GPATCH11Q8N954 259 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 EYA1Q99502 592 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
KARS-211ENST00000569298 GNPATO15228 680 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 KIF1CO43896 1103 aaKnown RBP8.09□□□□□ -1.11
KARS-211ENST00000569298 SSR1P43307 286 aaKnown RBP8.09□□□□□ -1.11
KARS-211ENST00000569298 HDGFP51858 240 aaKnown RBP8.09□□□□□ -1.11
KARS-211ENST00000569298 PPP4CP60510 307 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 CCDC173Q0VFZ6 552 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 BECN1Q14457 450 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 TIGD1Q96MW7 591 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 FEZ1Q99689 392 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 CALCOCO1Q9P1Z2 691 aa8.09□□□□□ -1.11
KARS-211ENST00000569298 CALRP27797 417 aaKnown RBP8.08□□□□□ -1.12
KARS-211ENST00000569298 HIC1Q14526 733 aa8.08□□□□□ -1.12
KARS-211ENST00000569298 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
KARS-211ENST00000569298 MYCBPQ99417 103 aaPredicted RBP8.08□□□□□ -1.12
KARS-211ENST00000569298 CEP83Q9Y592 693 aa8.08□□□□□ -1.12
KARS-211ENST00000569298 CEP162Q5TB80 1403 aa8.08□□□□□ -1.12
KARS-211ENST00000569298 SCAPERQ9BY12 1400 aa8.07□□□□□ -1.12
KARS-211ENST00000569298 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.12
KARS-211ENST00000569298 MAP2K1Q02750 393 aaPredicted RBP8.07□□□□□ -1.12
KARS-211ENST00000569298 DDX10Q13206 875 aaKnown RBP8.07□□□□□ -1.12
KARS-211ENST00000569298 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
KARS-211ENST00000569298 TMED8Q6PL24 325 aaPredicted RBP8.07□□□□□ -1.12
KARS-211ENST00000569298 SASS6Q6UVJ0 657 aa8.07□□□□□ -1.12
KARS-211ENST00000569298 BANK1Q8NDB2 785 aa8.07□□□□□ -1.12
KARS-211ENST00000569298 MNS1Q8NEH6 495 aa8.07□□□□□ -1.12
KARS-211ENST00000569298 CCDC102AQ96A19 550 aa8.07□□□□□ -1.12
KARS-211ENST00000569298 NCAPGQ9BPX3 1015 aa8.07□□□□□ -1.12
KARS-211ENST00000569298 IBTKQ9P2D0 1353 aaPredicted RBP8.07□□□□□ -1.12
KARS-211ENST00000569298 A0A0G2JS52 829 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 IRF6O14896 467 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
KARS-211ENST00000569298 OTUD6BQ8N6M0 293 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 GRPEL1Q9HAV7 217 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 TERF2IPQ9NYB0 399 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 SH3BP1Q9Y3L3 701 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 ADGRG1Q9Y653 693 aa8.06□□□□□ -1.12
KARS-211ENST00000569298 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
KARS-211ENST00000569298 KCNC4Q03721 635 aa8.05□□□□□ -1.12
KARS-211ENST00000569298 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
KARS-211ENST00000569298 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
KARS-211ENST00000569298 POGKQ9P215 609 aa8.05□□□□□ -1.12
KARS-211ENST00000569298 CGNQ9P2M7 1197 aaKnown RBP8.05□□□□□ -1.12
KARS-211ENST00000569298 PEG3Q9GZU2 1588 aa8.05□□□□□ -1.12
KARS-211ENST00000569298 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 CCDC144AA2RUR9 1427 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 UQCRHLA0A096LP55 91 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 RGS20O76081 388 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 UQCRHP07919 91 aa8.04□□□□□ -1.12
KARS-211ENST00000569298 CCDC172P0C7W6 258 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms