RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TESK2Q96S53 571 aa22.3■■□□□ 1.16
USB1-215ENST00000569252 QRICH2Q9H0J4 1663 aa22.3■■□□□ 1.16
USB1-215ENST00000569252 KIF1AQ12756 1690 aa22.28■■□□□ 1.16
USB1-215ENST00000569252 PLCH1Q4KWH8 1693 aa22.28■■□□□ 1.16
USB1-215ENST00000569252 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
USB1-215ENST00000569252 CABP2Q9NPB3 220 aa22.28■■□□□ 1.16
USB1-215ENST00000569252 LMOD2Q6P5Q4 547 aa22.27■■□□□ 1.16
USB1-215ENST00000569252 ABCA3Q99758 1704 aa22.27■■□□□ 1.16
USB1-215ENST00000569252 NUDT16Q96DE0 195 aaKnown RBP22.26■■□□□ 1.15
USB1-215ENST00000569252 PUS7Q96PZ0 661 aaKnown RBP22.26■■□□□ 1.15
USB1-215ENST00000569252 SEPT12Q8IYM1 358 aa22.25■■□□□ 1.15
USB1-215ENST00000569252 TNS3Q68CZ2 1445 aa22.24■■□□□ 1.15
USB1-215ENST00000569252 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
USB1-215ENST00000569252 PMFBP1Q8TBY8 1022 aa22.24■■□□□ 1.15
USB1-215ENST00000569252 PHF8Q9UPP1 1060 aa22.24■■□□□ 1.15
USB1-215ENST00000569252 CCDC9Q9Y3X0 531 aaKnown RBP22.24■■□□□ 1.15
USB1-215ENST00000569252 CCDC61Q9Y6R9 512 aa22.24■■□□□ 1.15
USB1-215ENST00000569252 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
USB1-215ENST00000569252 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
USB1-215ENST00000569252 ADGRB2O60241 1585 aa22.21■■□□□ 1.15
USB1-215ENST00000569252 FAM182BQ5T319 152 aa22.19■■□□□ 1.14
USB1-215ENST00000569252 ANKARQ7Z5J8 1434 aa22.19■■□□□ 1.14
USB1-215ENST00000569252 PSDA5PKW4 1024 aaPredicted RBP22.18■■□□□ 1.14
USB1-215ENST00000569252 CCDC125Q86Z20 511 aa22.18■■□□□ 1.14
USB1-215ENST00000569252 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
USB1-215ENST00000569252 TULP4Q9NRJ4 1543 aa22.17■■□□□ 1.14
USB1-215ENST00000569252 A0A0G2JS52 829 aa22.17■■□□□ 1.14
USB1-215ENST00000569252 FAM83GA6ND36 823 aa22.17■■□□□ 1.14
USB1-215ENST00000569252 MYT1Q01538 1121 aa22.17■■□□□ 1.14
USB1-215ENST00000569252 VPS72Q15906 364 aa22.17■■□□□ 1.14
USB1-215ENST00000569252 CABP1Q9NZU7 370 aa22.17■■□□□ 1.14
USB1-215ENST00000569252 NRAPQ86VF7 1730 aa22.16■■□□□ 1.14
USB1-215ENST00000569252 PSME1Q06323 249 aa22.15■■□□□ 1.14
USB1-215ENST00000569252 NWD2Q9ULI1 1742 aa22.14■■□□□ 1.14
USB1-215ENST00000569252 PRR36Q9H6K5 1346 aa22.14■■□□□ 1.14
USB1-215ENST00000569252 FAM98CQ17RN3 349 aaKnown RBP22.14■■□□□ 1.13
USB1-215ENST00000569252 KRT27Q7Z3Y8 459 aa22.14■■□□□ 1.13
USB1-215ENST00000569252 TERF2IPQ9NYB0 399 aa22.14■■□□□ 1.13
USB1-215ENST00000569252 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
USB1-215ENST00000569252 PLEKHG3A1L390 1219 aa22.13■■□□□ 1.13
USB1-215ENST00000569252 HDGFL2Q7Z4V5 671 aaPredicted RBP22.13■■□□□ 1.13
USB1-215ENST00000569252 PPIP5K1Q6PFW1 1433 aa22.13■■□□□ 1.13
USB1-215ENST00000569252 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
USB1-215ENST00000569252 ZNF316A6NFI3 1004 aaPredicted RBP22.12■■□□□ 1.13
USB1-215ENST00000569252 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
USB1-215ENST00000569252 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
USB1-215ENST00000569252 NINLQ9Y2I6 1382 aa22.12■■□□□ 1.13
USB1-215ENST00000569252 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
USB1-215ENST00000569252 KIF7Q2M1P5 1343 aa22.1■■□□□ 1.13
USB1-215ENST00000569252 SF3B2Q13435 895 aaKnown RBP22.1■■□□□ 1.13
USB1-215ENST00000569252 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
USB1-215ENST00000569252 ATP7BP35670 1465 aa22.09■■□□□ 1.13
USB1-215ENST00000569252 ACEP12821 1306 aa22.09■■□□□ 1.13
USB1-215ENST00000569252 ALS2Q96Q42 1657 aa22.08■■□□□ 1.13
USB1-215ENST00000569252 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
USB1-215ENST00000569252 ARHGEF10O15013 1369 aa22.08■■□□□ 1.12
USB1-215ENST00000569252 CCDC7Q96M83 1385 aa22.07■■□□□ 1.12
USB1-215ENST00000569252 WASHC2AQ641Q2 1341 aa22.06■■□□□ 1.12
USB1-215ENST00000569252 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
USB1-215ENST00000569252 ITSN1Q15811 1721 aa22.06■■□□□ 1.12
USB1-215ENST00000569252 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
USB1-215ENST00000569252 CRYBG1Q9Y4K1 1723 aa22.05■■□□□ 1.12
USB1-215ENST00000569252 LRP5O75197 1615 aa22.03■■□□□ 1.12
USB1-215ENST00000569252 COL14A1Q05707 1796 aaKnown RBP22.02■■□□□ 1.12
USB1-215ENST00000569252 KTN1Q86UP2 1357 aaKnown RBP22.02■■□□□ 1.12
USB1-215ENST00000569252 PANK3Q9H999 370 aa22.02■■□□□ 1.12
USB1-215ENST00000569252 CHRNA2Q15822 529 aa22.01■■□□□ 1.11
USB1-215ENST00000569252 NUTM2GQ5VZR2 741 aa22.01■■□□□ 1.11
USB1-215ENST00000569252 POLR3AO14802 1390 aaPredicted RBP22■■□□□ 1.11
USB1-215ENST00000569252 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
USB1-215ENST00000569252 BAG6P46379 1132 aa21.99■■□□□ 1.11
USB1-215ENST00000569252 R3HDM1Q15032 1099 aaKnown RBP21.99■■□□□ 1.11
USB1-215ENST00000569252 TNS1Q9HBL0 1735 aaKnown RBP21.99■■□□□ 1.11
USB1-215ENST00000569252 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
USB1-215ENST00000569252 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
USB1-215ENST00000569252 THSD7AQ9UPZ6 1657 aa21.98■■□□□ 1.11
USB1-215ENST00000569252 BRD4O60885 1362 aaPredicted RBP21.98■■□□□ 1.11
USB1-215ENST00000569252 KNSTRNQ9Y448 316 aa21.97■■□□□ 1.11
USB1-215ENST00000569252 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
USB1-215ENST00000569252 TOPAZ1Q8N9V7 1692 aa21.96■■□□□ 1.11
USB1-215ENST00000569252 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
USB1-215ENST00000569252 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
USB1-215ENST00000569252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
USB1-215ENST00000569252 PRDM11Q9NQV5 511 aa21.96■■□□□ 1.11
USB1-215ENST00000569252 ABTB2Q8N961 1025 aa21.95■■□□□ 1.1
USB1-215ENST00000569252 STRN4Q9NRL3 753 aa21.95■■□□□ 1.1
USB1-215ENST00000569252 A0A1W2PP64 1363 aa21.95■■□□□ 1.1
USB1-215ENST00000569252 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
USB1-215ENST00000569252 CPSF1Q10570 1443 aaKnown RBP21.95■■□□□ 1.1
USB1-215ENST00000569252 ZC3H6P61129 1189 aaKnown RBP21.94■■□□□ 1.1
USB1-215ENST00000569252 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
USB1-215ENST00000569252 USP6P35125 1406 aa21.93■■□□□ 1.1
USB1-215ENST00000569252 TTC21BQ7Z4L5 1316 aa21.93■■□□□ 1.1
USB1-215ENST00000569252 TTC21AQ8NDW8 1320 aa21.93■■□□□ 1.1
USB1-215ENST00000569252 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
USB1-215ENST00000569252 TRIM37O94972 964 aa21.92■■□□□ 1.1
USB1-215ENST00000569252 EDC4Q6P2E9 1401 aaKnown RBP21.91■■□□□ 1.1
USB1-215ENST00000569252 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
USB1-215ENST00000569252 SPATA31A1Q5TZJ5 1347 aa21.9■■□□□ 1.1
USB1-215ENST00000569252 CARD14Q9BXL6 1004 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms