RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PRAM1Q96QH2 718 aa12.96□□□□□ -0.33
SMG1-216ENST00000569122 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.34
SMG1-216ENST00000569122 EVA1CP58658 441 aa12.95□□□□□ -0.34
SMG1-216ENST00000569122 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
SMG1-216ENST00000569122 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
SMG1-216ENST00000569122 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
SMG1-216ENST00000569122 PIK3C2GO75747 1445 aa12.94□□□□□ -0.34
SMG1-216ENST00000569122 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
SMG1-216ENST00000569122 ACIN1Q9UKV3 1341 aaKnown RBP12.93□□□□□ -0.34
SMG1-216ENST00000569122 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
SMG1-216ENST00000569122 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMG1-216ENST00000569122 STRN4Q9NRL3 753 aa12.92□□□□□ -0.34
SMG1-216ENST00000569122 PPLO60437 1756 aa12.92□□□□□ -0.34
SMG1-216ENST00000569122 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
SMG1-216ENST00000569122 THRAP3Q9Y2W1 955 aaKnown RBP12.91□□□□□ -0.34
SMG1-216ENST00000569122 COL14A1Q05707 1796 aaKnown RBP12.91□□□□□ -0.34
SMG1-216ENST00000569122 CFAP70Q5T0N1 1121 aa12.9□□□□□ -0.34
SMG1-216ENST00000569122 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
SMG1-216ENST00000569122 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
SMG1-216ENST00000569122 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
SMG1-216ENST00000569122 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
SMG1-216ENST00000569122 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
SMG1-216ENST00000569122 WASLO00401 505 aaPredicted RBP12.88□□□□□ -0.35
SMG1-216ENST00000569122 PLSCR1O15162 318 aa12.88□□□□□ -0.35
SMG1-216ENST00000569122 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
SMG1-216ENST00000569122 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
SMG1-216ENST00000569122 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
SMG1-216ENST00000569122 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
SMG1-216ENST00000569122 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
SMG1-216ENST00000569122 NRAPQ86VF7 1730 aa12.87□□□□□ -0.35
SMG1-216ENST00000569122 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
SMG1-216ENST00000569122 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
SMG1-216ENST00000569122 PPARGC1BQ86YN6 1023 aaKnown RBP12.85□□□□□ -0.35
SMG1-216ENST00000569122 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
SMG1-216ENST00000569122 DLC1Q96QB1 1528 aa12.84□□□□□ -0.35
SMG1-216ENST00000569122 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
SMG1-216ENST00000569122 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
SMG1-216ENST00000569122 MINK1Q8N4C8 1332 aaPredicted RBP12.84□□□□□ -0.35
SMG1-216ENST00000569122 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
SMG1-216ENST00000569122 SSH2Q76I76 1423 aa12.83□□□□□ -0.36
SMG1-216ENST00000569122 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.36
SMG1-216ENST00000569122 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
SMG1-216ENST00000569122 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
SMG1-216ENST00000569122 PRR36Q9H6K5 1346 aa12.83□□□□□ -0.36
SMG1-216ENST00000569122 ATP7BP35670 1465 aa12.81□□□□□ -0.36
SMG1-216ENST00000569122 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
SMG1-216ENST00000569122 IFT172Q9UG01 1749 aa12.81□□□□□ -0.36
SMG1-216ENST00000569122 TULP4Q9NRJ4 1543 aa12.81□□□□□ -0.36
SMG1-216ENST00000569122 CPDO75976 1380 aa12.81□□□□□ -0.36
SMG1-216ENST00000569122 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
SMG1-216ENST00000569122 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
SMG1-216ENST00000569122 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
SMG1-216ENST00000569122 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
SMG1-216ENST00000569122 SYT17Q9BSW7 474 aa12.8□□□□□ -0.36
SMG1-216ENST00000569122 STK32BQ9NY57 414 aa12.8□□□□□ -0.36
SMG1-216ENST00000569122 ZBTB7AO95365 584 aa12.79□□□□□ -0.36
SMG1-216ENST00000569122 DDB1Q16531 1140 aa12.79□□□□□ -0.36
SMG1-216ENST00000569122 NLRP13Q86W25 1043 aa12.79□□□□□ -0.36
SMG1-216ENST00000569122 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
SMG1-216ENST00000569122 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
SMG1-216ENST00000569122 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
SMG1-216ENST00000569122 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
SMG1-216ENST00000569122 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
SMG1-216ENST00000569122 TRPM3Q9HCF6 1732 aaPredicted RBP12.78□□□□□ -0.36
SMG1-216ENST00000569122 RREB1Q92766 1687 aa12.77□□□□□ -0.36
SMG1-216ENST00000569122 GCP02774 474 aa12.77□□□□□ -0.37
SMG1-216ENST00000569122 PTGER2P43116 358 aa12.77□□□□□ -0.37
SMG1-216ENST00000569122 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.37
SMG1-216ENST00000569122 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
SMG1-216ENST00000569122 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
SMG1-216ENST00000569122 RGPD8O14715 1765 aaPredicted RBP12.76□□□□□ -0.37
SMG1-216ENST00000569122 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
SMG1-216ENST00000569122 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
SMG1-216ENST00000569122 ACEP12821 1306 aa12.76□□□□□ -0.37
SMG1-216ENST00000569122 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
SMG1-216ENST00000569122 CRB1P82279 1406 aa12.75□□□□□ -0.37
SMG1-216ENST00000569122 SLC15A2Q16348 729 aa12.75□□□□□ -0.37
SMG1-216ENST00000569122 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
SMG1-216ENST00000569122 USP19O94966 1318 aa12.74□□□□□ -0.37
SMG1-216ENST00000569122 ARXQ96QS3 562 aa12.74□□□□□ -0.37
SMG1-216ENST00000569122 CDK19Q9BWU1 502 aa12.74□□□□□ -0.37
SMG1-216ENST00000569122 UTRNP46939 3433 aa12.74□□□□□ -0.37
SMG1-216ENST00000569122 BCL9O00512 1426 aa12.73□□□□□ -0.37
SMG1-216ENST00000569122 BRD4O60885 1362 aaPredicted RBP12.73□□□□□ -0.37
SMG1-216ENST00000569122 GPR162Q16538 588 aa12.73□□□□□ -0.37
SMG1-216ENST00000569122 TXNRD1Q16881 649 aa12.73□□□□□ -0.37
SMG1-216ENST00000569122 TOM1L2Q6ZVM7 507 aa12.73□□□□□ -0.37
SMG1-216ENST00000569122 PROM2Q8N271 834 aa12.73□□□□□ -0.37
SMG1-216ENST00000569122 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
SMG1-216ENST00000569122 MAP3K5Q99683 1374 aa12.71□□□□□ -0.37
SMG1-216ENST00000569122 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.37
SMG1-216ENST00000569122 PDGFDQ9GZP0 370 aaPredicted RBP12.71□□□□□ -0.37
SMG1-216ENST00000569122 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.37
SMG1-216ENST00000569122 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
SMG1-216ENST00000569122 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
SMG1-216ENST00000569122 EXOC5O00471 708 aa12.7□□□□□ -0.38
SMG1-216ENST00000569122 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
SMG1-216ENST00000569122 COL5A2P05997 1499 aaPredicted RBP12.7□□□□□ -0.38
SMG1-216ENST00000569122 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
SMG1-216ENST00000569122 ZBTB7CA1YPR0 619 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms