RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 TNNT2P45379 298 aaPredicted RBP16.92■□□□□ 0.3
GGA2-213ENST00000568922 XIRP1Q702N8 1843 aaKnown RBP16.92■□□□□ 0.3
GGA2-213ENST00000568922 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
GGA2-213ENST00000568922 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
GGA2-213ENST00000568922 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
GGA2-213ENST00000568922 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
GGA2-213ENST00000568922 NME9Q86XW9 330 aa16.9■□□□□ 0.3
GGA2-213ENST00000568922 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
GGA2-213ENST00000568922 LRRC7Q96NW7 1537 aa16.89■□□□□ 0.29
GGA2-213ENST00000568922 MTHFSP49914 203 aa16.89■□□□□ 0.29
GGA2-213ENST00000568922 COG3Q96JB2 828 aa16.89■□□□□ 0.29
GGA2-213ENST00000568922 CFAP53Q96M91 514 aa16.89■□□□□ 0.29
GGA2-213ENST00000568922 ATF3P18847 181 aa16.88■□□□□ 0.29
GGA2-213ENST00000568922 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
GGA2-213ENST00000568922 MSH6P52701 1360 aa16.88■□□□□ 0.29
GGA2-213ENST00000568922 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
GGA2-213ENST00000568922 ESCO1Q5FWF5 840 aa16.87■□□□□ 0.29
GGA2-213ENST00000568922 C1orf167Q5SNV9 1468 aa16.87■□□□□ 0.29
GGA2-213ENST00000568922 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
GGA2-213ENST00000568922 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
GGA2-213ENST00000568922 OVOS2A0A0J9YW53 1432 aa16.86■□□□□ 0.29
GGA2-213ENST00000568922 BLMP54132 1417 aaPredicted RBP16.86■□□□□ 0.29
GGA2-213ENST00000568922 OVOS2Q6IE36 1432 aa16.86■□□□□ 0.29
GGA2-213ENST00000568922 CADPS2Q86UW7 1296 aa16.86■□□□□ 0.29
GGA2-213ENST00000568922 USP54Q70EL1 1684 aa16.86■□□□□ 0.29
GGA2-213ENST00000568922 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
GGA2-213ENST00000568922 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
GGA2-213ENST00000568922 MST1RQ04912 1400 aa16.85■□□□□ 0.29
GGA2-213ENST00000568922 ZBED9Q6R2W3 1325 aa16.85■□□□□ 0.29
GGA2-213ENST00000568922 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
GGA2-213ENST00000568922 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
GGA2-213ENST00000568922 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
GGA2-213ENST00000568922 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
GGA2-213ENST00000568922 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
GGA2-213ENST00000568922 PSME1Q06323 249 aa16.82■□□□□ 0.28
GGA2-213ENST00000568922 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
GGA2-213ENST00000568922 PNPLA6Q8IY17 1366 aa16.81■□□□□ 0.28
GGA2-213ENST00000568922 POLKQ9UBT6 870 aa16.81■□□□□ 0.28
GGA2-213ENST00000568922 MARF1Q9Y4F3 1742 aaKnown RBP16.8■□□□□ 0.28
GGA2-213ENST00000568922 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
GGA2-213ENST00000568922 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
GGA2-213ENST00000568922 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
GGA2-213ENST00000568922 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
GGA2-213ENST00000568922 FOXO3O43524 673 aa16.77■□□□□ 0.28
GGA2-213ENST00000568922 ABTB2Q8N961 1025 aa16.77■□□□□ 0.28
GGA2-213ENST00000568922 NLRP6P59044 892 aa16.77■□□□□ 0.27
GGA2-213ENST00000568922 DIAPH1O60610 1272 aaKnown RBP16.76■□□□□ 0.27
GGA2-213ENST00000568922 FBLN1P23142 703 aa16.76■□□□□ 0.27
GGA2-213ENST00000568922 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
GGA2-213ENST00000568922 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
GGA2-213ENST00000568922 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
GGA2-213ENST00000568922 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
GGA2-213ENST00000568922 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
GGA2-213ENST00000568922 ALS2Q96Q42 1657 aa16.72■□□□□ 0.27
GGA2-213ENST00000568922 PEAK1Q9H792 1746 aa16.72■□□□□ 0.27
GGA2-213ENST00000568922 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
GGA2-213ENST00000568922 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
GGA2-213ENST00000568922 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
GGA2-213ENST00000568922 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.27
GGA2-213ENST00000568922 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
GGA2-213ENST00000568922 RUNDC1Q96C34 613 aa16.71■□□□□ 0.27
GGA2-213ENST00000568922 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
GGA2-213ENST00000568922 SBNO1A3KN83 1393 aa16.71■□□□□ 0.27
GGA2-213ENST00000568922 KIF24Q5T7B8 1368 aa16.71■□□□□ 0.27
GGA2-213ENST00000568922 U2SURPO15042 1029 aaKnown RBP16.7■□□□□ 0.26
GGA2-213ENST00000568922 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
GGA2-213ENST00000568922 NUTM2GQ5VZR2 741 aa16.7■□□□□ 0.26
GGA2-213ENST00000568922 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
GGA2-213ENST00000568922 SLIT3O75094 1523 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 SOX12O15370 315 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 PDE3BQ13370 1112 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 KCNH5Q8NCM2 988 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 PNNQ9H307 717 aaKnown RBP16.69■□□□□ 0.26
GGA2-213ENST00000568922 FLT4P35916 1363 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 LTN1O94822 1766 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 PXDNQ92626 1479 aa16.69■□□□□ 0.26
GGA2-213ENST00000568922 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
GGA2-213ENST00000568922 IL13P35225 146 aa16.68■□□□□ 0.26
GGA2-213ENST00000568922 NFAT5O94916 1531 aa16.68■□□□□ 0.26
GGA2-213ENST00000568922 APAF1O14727 1248 aa16.68■□□□□ 0.26
GGA2-213ENST00000568922 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
GGA2-213ENST00000568922 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
GGA2-213ENST00000568922 PHRF1Q9P1Y6 1649 aaKnown RBP16.66■□□□□ 0.26
GGA2-213ENST00000568922 AMPHP49418 695 aa16.66■□□□□ 0.26
GGA2-213ENST00000568922 USP19O94966 1318 aa16.66■□□□□ 0.26
GGA2-213ENST00000568922 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
GGA2-213ENST00000568922 RTL1A6NKG5 1358 aa16.66■□□□□ 0.26
GGA2-213ENST00000568922 FCHSD2O94868 740 aa16.66■□□□□ 0.26
GGA2-213ENST00000568922 LMOD2Q6P5Q4 547 aa16.66■□□□□ 0.26
GGA2-213ENST00000568922 NHSL1Q5SYE7 1610 aa16.65■□□□□ 0.26
GGA2-213ENST00000568922 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
GGA2-213ENST00000568922 RGPD1P0DJD0 1748 aa16.64■□□□□ 0.25
GGA2-213ENST00000568922 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
GGA2-213ENST00000568922 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
GGA2-213ENST00000568922 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
GGA2-213ENST00000568922 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
GGA2-213ENST00000568922 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
GGA2-213ENST00000568922 SPATA31A3Q5VYP0 1347 aa16.63■□□□□ 0.25
GGA2-213ENST00000568922 ARHGEF10O15013 1369 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms