RNA–Protein interactions for RNA: ENST00000568448.1

UTP4-213, Transcript of UTP4, small subunit processome component, humanhuman

TSL 4

Gene UTP4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-213ENST00000568448 PHF8Q9UPP1 1060 aa22.32■■□□□ 1.16
UTP4-213ENST00000568448 COL14A1Q05707 1796 aaKnown RBP22.32■■□□□ 1.16
UTP4-213ENST00000568448 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
UTP4-213ENST00000568448 USP35Q9P2H5 1018 aa22.3■■□□□ 1.16
UTP4-213ENST00000568448 CASZ1Q86V15 1759 aa22.3■■□□□ 1.16
UTP4-213ENST00000568448 SBNO1A3KN83 1393 aa22.29■■□□□ 1.16
UTP4-213ENST00000568448 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
UTP4-213ENST00000568448 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
UTP4-213ENST00000568448 FMN2Q9NZ56 1722 aa22.28■■□□□ 1.16
UTP4-213ENST00000568448 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
UTP4-213ENST00000568448 CAPN15O75808 1086 aa22.27■■□□□ 1.16
UTP4-213ENST00000568448 GPR162Q16538 588 aa22.27■■□□□ 1.16
UTP4-213ENST00000568448 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
UTP4-213ENST00000568448 BCL11BQ9C0K0 894 aaPredicted RBP22.24■■□□□ 1.15
UTP4-213ENST00000568448 RGPD8O14715 1765 aaPredicted RBP22.23■■□□□ 1.15
UTP4-213ENST00000568448 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
UTP4-213ENST00000568448 PRDM11Q9NQV5 511 aa22.23■■□□□ 1.15
UTP4-213ENST00000568448 PMFBP1Q8TBY8 1022 aa22.22■■□□□ 1.15
UTP4-213ENST00000568448 PELP1Q8IZL8 1130 aaKnown RBP22.21■■□□□ 1.15
UTP4-213ENST00000568448 TECPR2O15040 1411 aa22.21■■□□□ 1.15
UTP4-213ENST00000568448 KIF1BO60333 1816 aa22.2■■□□□ 1.14
UTP4-213ENST00000568448 CHRNA2Q15822 529 aa22.19■■□□□ 1.14
UTP4-213ENST00000568448 NRXN1Q9ULB1 1477 aa22.19■■□□□ 1.14
UTP4-213ENST00000568448 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
UTP4-213ENST00000568448 HSPA6P17066 643 aa22.18■■□□□ 1.14
UTP4-213ENST00000568448 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
UTP4-213ENST00000568448 ARXQ96QS3 562 aa22.15■■□□□ 1.14
UTP4-213ENST00000568448 TMEM132EQ6IEE7 984 aa22.13■■□□□ 1.13
UTP4-213ENST00000568448 KLHL34Q8N239 644 aa22.13■■□□□ 1.13
UTP4-213ENST00000568448 MTFR1LQ9H019 292 aa22.13■■□□□ 1.13
UTP4-213ENST00000568448 PLSCR1O15162 318 aa22.12■■□□□ 1.13
UTP4-213ENST00000568448 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
UTP4-213ENST00000568448 STK32BQ9NY57 414 aa22.12■■□□□ 1.13
UTP4-213ENST00000568448 IFT172Q9UG01 1749 aa22.11■■□□□ 1.13
UTP4-213ENST00000568448 EVA1CP58658 441 aa22.11■■□□□ 1.13
UTP4-213ENST00000568448 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
UTP4-213ENST00000568448 KIAA0232Q92628 1395 aa22.11■■□□□ 1.13
UTP4-213ENST00000568448 PTF1AQ7RTS3 328 aa22.09■■□□□ 1.13
UTP4-213ENST00000568448 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.13
UTP4-213ENST00000568448 PAK3O75914 559 aaPredicted RBP22.08■■□□□ 1.13
UTP4-213ENST00000568448 PROM2Q8N271 834 aa22.08■■□□□ 1.13
UTP4-213ENST00000568448 TRPM3Q9HCF6 1732 aaPredicted RBP22.07■■□□□ 1.12
UTP4-213ENST00000568448 ZC3H6P61129 1189 aaKnown RBP22.07■■□□□ 1.12
UTP4-213ENST00000568448 ALS2Q96Q42 1657 aa22.07■■□□□ 1.12
UTP4-213ENST00000568448 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
UTP4-213ENST00000568448 SLC15A2Q16348 729 aa22.06■■□□□ 1.12
UTP4-213ENST00000568448 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
UTP4-213ENST00000568448 RGPD3A6NKT7 1758 aaPredicted RBP22.05■■□□□ 1.12
UTP4-213ENST00000568448 PPLO60437 1756 aa22.05■■□□□ 1.12
UTP4-213ENST00000568448 RGPD4Q7Z3J3 1758 aa22.05■■□□□ 1.12
UTP4-213ENST00000568448 GPRASP1Q5JY77 1395 aa22.05■■□□□ 1.12
UTP4-213ENST00000568448 LARP1Q6PKG0 1096 aaKnown RBP22.05■■□□□ 1.12
UTP4-213ENST00000568448 TCP11L2Q8N4U5 519 aa22.05■■□□□ 1.12
UTP4-213ENST00000568448 ADGRF5Q8IZF2 1346 aa22.05■■□□□ 1.12
UTP4-213ENST00000568448 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
UTP4-213ENST00000568448 ATP10DQ9P241 1426 aa22.04■■□□□ 1.12
UTP4-213ENST00000568448 GPBP1L1Q9HC44 474 aaPredicted RBP22.03■■□□□ 1.12
UTP4-213ENST00000568448 CRYBG1Q9Y4K1 1723 aa22.03■■□□□ 1.12
UTP4-213ENST00000568448 ROCK1Q13464 1354 aa22.02■■□□□ 1.12
UTP4-213ENST00000568448 MAP3K5Q99683 1374 aa22.02■■□□□ 1.12
UTP4-213ENST00000568448 COL13A1Q5TAT6 717 aaPredicted RBP22.02■■□□□ 1.12
UTP4-213ENST00000568448 ZNF526Q8TF50 670 aaPredicted RBP22.02■■□□□ 1.12
UTP4-213ENST00000568448 OVOS2A0A0G2JMS6 1433 aa22.02■■□□□ 1.12
UTP4-213ENST00000568448 OVOS2A0A0J9YW53 1432 aa22.02■■□□□ 1.12
UTP4-213ENST00000568448 OVOS2Q6IE36 1432 aa22.02■■□□□ 1.12
UTP4-213ENST00000568448 KNDC1Q76NI1 1749 aa22.02■■□□□ 1.12
UTP4-213ENST00000568448 ITGAEP38570 1179 aa22.01■■□□□ 1.11
UTP4-213ENST00000568448 C11orf95C9JLR9 678 aaPredicted RBP22■■□□□ 1.11
UTP4-213ENST00000568448 TXNRD1Q16881 649 aa21.99■■□□□ 1.11
UTP4-213ENST00000568448 ACIN1Q9UKV3 1341 aaKnown RBP21.99■■□□□ 1.11
UTP4-213ENST00000568448 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
UTP4-213ENST00000568448 CCER1Q8TC90 406 aaPredicted RBP21.97■■□□□ 1.11
UTP4-213ENST00000568448 DHX57Q6P158 1386 aaKnown RBP21.97■■□□□ 1.11
UTP4-213ENST00000568448 NUTM2GQ5VZR2 741 aa21.96■■□□□ 1.11
UTP4-213ENST00000568448 SBF2Q86WG5 1849 aa21.96■■□□□ 1.11
UTP4-213ENST00000568448 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
UTP4-213ENST00000568448 PRELPP51888 382 aa21.95■■□□□ 1.1
UTP4-213ENST00000568448 SLC34A2O95436 690 aa21.94■■□□□ 1.1
UTP4-213ENST00000568448 TNS4Q8IZW8 715 aa21.94■■□□□ 1.1
UTP4-213ENST00000568448 NLGN2Q8NFZ4 835 aa21.94■■□□□ 1.1
UTP4-213ENST00000568448 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
UTP4-213ENST00000568448 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
UTP4-213ENST00000568448 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
UTP4-213ENST00000568448 NGDNQ8NEJ9 315 aaKnown RBP21.93■■□□□ 1.1
UTP4-213ENST00000568448 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
UTP4-213ENST00000568448 ANKARQ7Z5J8 1434 aa21.92■■□□□ 1.1
UTP4-213ENST00000568448 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.12e-7■□□□□ 9.6
UTP4-213ENST00000568448 RGL3Q3MIN7 710 aa21.91■■□□□ 1.1
UTP4-213ENST00000568448 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
UTP4-213ENST00000568448 PHRF1Q9P1Y6 1649 aaKnown RBP21.91■■□□□ 1.1
UTP4-213ENST00000568448 GRIN3BO60391 1043 aa21.9■■□□□ 1.1
UTP4-213ENST00000568448 DDB1Q16531 1140 aa21.89■■□□□ 1.09
UTP4-213ENST00000568448 SIRT1Q96EB6 747 aa21.89■■□□□ 1.09
UTP4-213ENST00000568448 APLP1P51693 650 aa21.88■■□□□ 1.09
UTP4-213ENST00000568448 HIRIP3Q9BW71 556 aaPredicted RBP21.88■■□□□ 1.09
UTP4-213ENST00000568448 ATP7BP35670 1465 aa21.88■■□□□ 1.09
UTP4-213ENST00000568448 POLD1P28340 1107 aa21.86■■□□□ 1.09
UTP4-213ENST00000568448 DNAJC5GQ8N7S2 189 aa21.86■■□□□ 1.09
UTP4-213ENST00000568448 POGKQ9P215 609 aa21.86■■□□□ 1.09
UTP4-213ENST00000568448 GOLGB1Q14789 3259 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms