RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 CENPJQ9HC77 1338 aaPredicted RBP27.29■■□□□ 1.96
SPSB3-210ENST00000568416 CRYBG1Q9Y4K1 1723 aa27.28■■□□□ 1.96
SPSB3-210ENST00000568416 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
SPSB3-210ENST00000568416 ACEP12821 1306 aa27.27■■□□□ 1.96
SPSB3-210ENST00000568416 ONECUT3O60422 494 aaPredicted RBP27.26■■□□□ 1.95
SPSB3-210ENST00000568416 COL14A1Q05707 1796 aaKnown RBP27.25■■□□□ 1.95
SPSB3-210ENST00000568416 NRAPQ86VF7 1730 aa27.25■■□□□ 1.95
SPSB3-210ENST00000568416 NBPF8Q3BBV2 869 aa27.25■■□□□ 1.95
SPSB3-210ENST00000568416 SEPT12Q8IYM1 358 aa27.25■■□□□ 1.95
SPSB3-210ENST00000568416 BTG4Q9NY30 223 aa27.25■■□□□ 1.95
SPSB3-210ENST00000568416 CCDC9Q9Y3X0 531 aaKnown RBP27.25■■□□□ 1.95
SPSB3-210ENST00000568416 CCDC125Q86Z20 511 aa27.23■■□□□ 1.95
SPSB3-210ENST00000568416 SRPK2P78362 688 aaKnown RBP27.22■■□□□ 1.95
SPSB3-210ENST00000568416 NEUROD1Q13562 356 aa27.22■■□□□ 1.95
SPSB3-210ENST00000568416 TRPM1Q7Z4N2 1603 aa27.2■■□□□ 1.95
SPSB3-210ENST00000568416 PPIP5K1Q6PFW1 1433 aa27.19■■□□□ 1.94
SPSB3-210ENST00000568416 CABP2Q9NPB3 220 aa27.19■■□□□ 1.94
SPSB3-210ENST00000568416 PRDM11Q9NQV5 511 aa27.19■■□□□ 1.94
SPSB3-210ENST00000568416 QRICH2Q9H0J4 1663 aa27.19■■□□□ 1.94
SPSB3-210ENST00000568416 PHRF1Q9P1Y6 1649 aaKnown RBP27.18■■□□□ 1.94
SPSB3-210ENST00000568416 BRWD3Q6RI45 1802 aa27.17■■□□□ 1.94
SPSB3-210ENST00000568416 KIAA0232Q92628 1395 aa27.17■■□□□ 1.94
SPSB3-210ENST00000568416 NUTM2GQ5VZR2 741 aa27.16■■□□□ 1.94
SPSB3-210ENST00000568416 BLMP54132 1417 aaPredicted RBP27.16■■□□□ 1.94
SPSB3-210ENST00000568416 SPATA31A5Q5VU36 1347 aa27.15■■□□□ 1.94
SPSB3-210ENST00000568416 SPATA31A7Q8IWB4 1347 aa27.15■■□□□ 1.94
SPSB3-210ENST00000568416 ROCK2O75116 1388 aaKnown RBP27.14■■□□□ 1.94
SPSB3-210ENST00000568416 FAM98CQ17RN3 349 aaKnown RBP27.14■■□□□ 1.94
SPSB3-210ENST00000568416 KRT27Q7Z3Y8 459 aa27.14■■□□□ 1.94
SPSB3-210ENST00000568416 ABTB2Q8N961 1025 aa27.13■■□□□ 1.93
SPSB3-210ENST00000568416 CHRNA2Q15822 529 aa27.12■■□□□ 1.93
SPSB3-210ENST00000568416 USP19O94966 1318 aa27.12■■□□□ 1.93
SPSB3-210ENST00000568416 BRD4O60885 1362 aaPredicted RBP27.11■■□□□ 1.93
SPSB3-210ENST00000568416 ZC3H6P61129 1189 aaKnown RBP27.11■■□□□ 1.93
SPSB3-210ENST00000568416 NRKQ7Z2Y5 1582 aa27.1■■□□□ 1.93
SPSB3-210ENST00000568416 CABP1Q9NZU7 370 aa27.1■■□□□ 1.93
SPSB3-210ENST00000568416 EVC2Q86UK5 1308 aa27.1■■□□□ 1.93
SPSB3-210ENST00000568416 A0A0G2JS52 829 aa27.09■■□□□ 1.93
SPSB3-210ENST00000568416 MYT1Q01538 1121 aa27.09■■□□□ 1.93
SPSB3-210ENST00000568416 USP6P35125 1406 aa27.07■■□□□ 1.92
SPSB3-210ENST00000568416 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
SPSB3-210ENST00000568416 CPDO75976 1380 aa27.07■■□□□ 1.92
SPSB3-210ENST00000568416 EP400Q96L91 3159 aa27.06■■□□□ 1.92
SPSB3-210ENST00000568416 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
SPSB3-210ENST00000568416 THSD7AQ9UPZ6 1657 aa27.05■■□□□ 1.92
SPSB3-210ENST00000568416 ZRANB1Q9UGI0 708 aa27.05■■□□□ 1.92
SPSB3-210ENST00000568416 STRN4Q9NRL3 753 aa27.04■■□□□ 1.92
SPSB3-210ENST00000568416 SSH2Q76I76 1423 aa27.04■■□□□ 1.92
SPSB3-210ENST00000568416 GCP02774 474 aa27.03■■□□□ 1.92
SPSB3-210ENST00000568416 SF3B2Q13435 895 aaKnown RBP27.03■■□□□ 1.92
SPSB3-210ENST00000568416 DEFB132Q7Z7B7 95 aa27.03■■□□□ 1.92
SPSB3-210ENST00000568416 LMO7Q8WWI1 1683 aa27.01■■□□□ 1.92
SPSB3-210ENST00000568416 CAMTA1Q9Y6Y1 1673 aa27.01■■□□□ 1.92
SPSB3-210ENST00000568416 SBNO2Q9Y2G9 1366 aa26.98■■□□□ 1.91
SPSB3-210ENST00000568416 EVA1CP58658 441 aa26.98■■□□□ 1.91
SPSB3-210ENST00000568416 NLRP6P59044 892 aa26.98■■□□□ 1.91
SPSB3-210ENST00000568416 SLIT3O75094 1523 aa26.98■■□□□ 1.91
SPSB3-210ENST00000568416 TONSLQ96HA7 1378 aa26.97■■□□□ 1.91
SPSB3-210ENST00000568416 FAM182BQ5T319 152 aa26.96■■□□□ 1.91
SPSB3-210ENST00000568416 LARP1Q6PKG0 1096 aaKnown RBP26.96■■□□□ 1.91
SPSB3-210ENST00000568416 ZNF692Q9BU19 519 aaPredicted RBP26.96■■□□□ 1.91
SPSB3-210ENST00000568416 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
SPSB3-210ENST00000568416 BARGINQ6ZT62 677 aa26.95■■□□□ 1.9
SPSB3-210ENST00000568416 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
SPSB3-210ENST00000568416 PIK3C2AO00443 1686 aa26.94■■□□□ 1.9
SPSB3-210ENST00000568416 TTC21BQ7Z4L5 1316 aa26.93■■□□□ 1.9
SPSB3-210ENST00000568416 CPSF1Q10570 1443 aaKnown RBP26.93■■□□□ 1.9
SPSB3-210ENST00000568416 TRIM26Q12899 539 aaPredicted RBP26.93■■□□□ 1.9
SPSB3-210ENST00000568416 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
SPSB3-210ENST00000568416 BAG6P46379 1132 aa26.92■■□□□ 1.9
SPSB3-210ENST00000568416 AATKQ6ZMQ8 1374 aa26.91■■□□□ 1.9
SPSB3-210ENST00000568416 AKAP12Q02952 1782 aa26.9■■□□□ 1.9
SPSB3-210ENST00000568416 TCP11L2Q8N4U5 519 aa26.9■■□□□ 1.9
SPSB3-210ENST00000568416 TTC21AQ8NDW8 1320 aa26.9■■□□□ 1.9
SPSB3-210ENST00000568416 THRAP3Q9Y2W1 955 aaKnown RBP26.88■■□□□ 1.89
SPSB3-210ENST00000568416 RGPD1P0DJD0 1748 aa26.87■■□□□ 1.89
SPSB3-210ENST00000568416 KTN1Q86UP2 1357 aaKnown RBP26.87■■□□□ 1.89
SPSB3-210ENST00000568416 ZBTB7CA1YPR0 619 aa26.87■■□□□ 1.89
SPSB3-210ENST00000568416 CRB1P82279 1406 aa26.86■■□□□ 1.89
SPSB3-210ENST00000568416 FAM196AQ6ZSG2 479 aa26.86■■□□□ 1.89
SPSB3-210ENST00000568416 DISP2A7MBM2 1401 aa26.85■■□□□ 1.89
SPSB3-210ENST00000568416 EN1Q05925 392 aaPredicted RBP26.84■■□□□ 1.89
SPSB3-210ENST00000568416 KCNH5Q8NCM2 988 aa26.84■■□□□ 1.89
SPSB3-210ENST00000568416 TNS1Q9HBL0 1735 aaKnown RBP26.83■■□□□ 1.89
SPSB3-210ENST00000568416 PDE3BQ13370 1112 aa26.83■■□□□ 1.89
SPSB3-210ENST00000568416 ARHGEF25Q86VW2 580 aa26.83■■□□□ 1.89
SPSB3-210ENST00000568416 COL18A1P39060 1754 aa26.83■■□□□ 1.89
SPSB3-210ENST00000568416 CD163L1Q9NR16 1453 aa26.82■■□□□ 1.88
SPSB3-210ENST00000568416 MON2Q7Z3U7 1717 aa26.82■■□□□ 1.88
SPSB3-210ENST00000568416 AXIN2Q9Y2T1 843 aa26.81■■□□□ 1.88
SPSB3-210ENST00000568416 TRIM37O94972 964 aa26.79■■□□□ 1.88
SPSB3-210ENST00000568416 PUS7Q96PZ0 661 aaKnown RBP26.79■■□□□ 1.88
SPSB3-210ENST00000568416 USP31Q70CQ4 1352 aa26.79■■□□□ 1.88
SPSB3-210ENST00000568416 NFAT5O94916 1531 aa26.79■■□□□ 1.88
SPSB3-210ENST00000568416 PARP4Q9UKK3 1724 aaKnown RBP26.78■■□□□ 1.88
SPSB3-210ENST00000568416 WDR17Q8IZU2 1322 aa26.77■■□□□ 1.88
SPSB3-210ENST00000568416 TOM1L2Q6ZVM7 507 aa26.77■■□□□ 1.88
SPSB3-210ENST00000568416 TMC1Q8TDI8 760 aa26.77■■□□□ 1.88
SPSB3-210ENST00000568416 SLC12A5Q9H2X9 1139 aa26.77■■□□□ 1.88
SPSB3-210ENST00000568416 SOX12O15370 315 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms