RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
SIN3A-209ENST00000568190 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
SIN3A-209ENST00000568190 SPATA31A3Q5VYP0 1347 aa11.58□□□□□ -0.56
SIN3A-209ENST00000568190 KRT28Q7Z3Y7 464 aa11.57□□□□□ -0.56
SIN3A-209ENST00000568190 ZNF692Q9BU19 519 aaPredicted RBP11.57□□□□□ -0.56
SIN3A-209ENST00000568190 SPATA31A6Q5VVP1 1343 aa11.57□□□□□ -0.56
SIN3A-209ENST00000568190 PHRF1Q9P1Y6 1649 aaKnown RBP11.57□□□□□ -0.56
SIN3A-209ENST00000568190 ANKRD36BQ8N2N9 1353 aa11.56□□□□□ -0.56
SIN3A-209ENST00000568190 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
SIN3A-209ENST00000568190 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
SIN3A-209ENST00000568190 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
SIN3A-209ENST00000568190 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
SIN3A-209ENST00000568190 KTN1Q86UP2 1357 aaKnown RBP11.54□□□□□ -0.56
SIN3A-209ENST00000568190 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
SIN3A-209ENST00000568190 LRP6O75581 1613 aa11.53□□□□□ -0.56
SIN3A-209ENST00000568190 ANKRD26Q9UPS8 1709 aa11.53□□□□□ -0.56
SIN3A-209ENST00000568190 SLC12A5Q9H2X9 1139 aa11.53□□□□□ -0.56
SIN3A-209ENST00000568190 TTC21AQ8NDW8 1320 aa11.53□□□□□ -0.56
SIN3A-209ENST00000568190 SLIT3O75094 1523 aa11.52□□□□□ -0.57
SIN3A-209ENST00000568190 HDGFL2Q7Z4V5 671 aaPredicted RBP11.52□□□□□ -0.57
SIN3A-209ENST00000568190 KIF7Q2M1P5 1343 aa11.52□□□□□ -0.57
SIN3A-209ENST00000568190 NWD2Q9ULI1 1742 aa11.52□□□□□ -0.57
SIN3A-209ENST00000568190 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
SIN3A-209ENST00000568190 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
SIN3A-209ENST00000568190 USP19O94966 1318 aa11.51□□□□□ -0.57
SIN3A-209ENST00000568190 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.51□□□□□ -0.57
SIN3A-209ENST00000568190 CCDC7Q96M83 1385 aa11.51□□□□□ -0.57
SIN3A-209ENST00000568190 TTC21BQ7Z4L5 1316 aa11.5□□□□□ -0.57
SIN3A-209ENST00000568190 USP31Q70CQ4 1352 aa11.5□□□□□ -0.57
SIN3A-209ENST00000568190 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
SIN3A-209ENST00000568190 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
SIN3A-209ENST00000568190 WASHC2AQ641Q2 1341 aa11.49□□□□□ -0.57
SIN3A-209ENST00000568190 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
SIN3A-209ENST00000568190 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
SIN3A-209ENST00000568190 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
SIN3A-209ENST00000568190 NFAT5O94916 1531 aa11.48□□□□□ -0.57
SIN3A-209ENST00000568190 ABCC6O95255 1503 aa11.48□□□□□ -0.57
SIN3A-209ENST00000568190 LTN1O94822 1766 aa11.48□□□□□ -0.57
SIN3A-209ENST00000568190 ABTB2Q8N961 1025 aa11.47□□□□□ -0.57
SIN3A-209ENST00000568190 NRAPQ86VF7 1730 aa11.46□□□□□ -0.57
SIN3A-209ENST00000568190 LMO7Q8WWI1 1683 aa11.46□□□□□ -0.57
SIN3A-209ENST00000568190 NSD3Q9BZ95 1437 aa11.46□□□□□ -0.57
SIN3A-209ENST00000568190 CPDO75976 1380 aa11.46□□□□□ -0.57
SIN3A-209ENST00000568190 NLRP13Q86W25 1043 aa11.46□□□□□ -0.57
SIN3A-209ENST00000568190 COL18A1P39060 1754 aa11.46□□□□□ -0.58
SIN3A-209ENST00000568190 SOCS7O14512 581 aa11.45□□□□□ -0.58
SIN3A-209ENST00000568190 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
SIN3A-209ENST00000568190 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
SIN3A-209ENST00000568190 SLIT2O94813 1529 aa11.45□□□□□ -0.58
SIN3A-209ENST00000568190 NSD2O96028 1365 aa11.44□□□□□ -0.58
SIN3A-209ENST00000568190 NLRP6P59044 892 aa11.44□□□□□ -0.58
SIN3A-209ENST00000568190 ILDR2Q71H61 639 aa11.44□□□□□ -0.58
SIN3A-209ENST00000568190 CGNL1Q0VF96 1302 aa11.43□□□□□ -0.58
SIN3A-209ENST00000568190 NME9Q86XW9 330 aa11.43□□□□□ -0.58
SIN3A-209ENST00000568190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.58
SIN3A-209ENST00000568190 RGPD5Q99666 1765 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
SIN3A-209ENST00000568190 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
SIN3A-209ENST00000568190 FYB1O15117 783 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 GCP02774 474 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
SIN3A-209ENST00000568190 FNBP4Q8N3X1 1017 aaPredicted RBP11.42□□□□□ -0.58
SIN3A-209ENST00000568190 KCNH5Q8NCM2 988 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 PANK3Q9H999 370 aa11.42□□□□□ -0.58
SIN3A-209ENST00000568190 MAP2P11137 1827 aaKnown RBP11.42□□□□□ -0.58
SIN3A-209ENST00000568190 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
SIN3A-209ENST00000568190 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
SIN3A-209ENST00000568190 BCL9LQ86UU0 1499 aa11.41□□□□□ -0.58
SIN3A-209ENST00000568190 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
SIN3A-209ENST00000568190 KIAA0232Q92628 1395 aa11.41□□□□□ -0.58
SIN3A-209ENST00000568190 PER1O15534 1290 aaPredicted RBP11.4□□□□□ -0.58
SIN3A-209ENST00000568190 ADAMTS2O95450 1211 aa11.4□□□□□ -0.58
SIN3A-209ENST00000568190 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
SIN3A-209ENST00000568190 MEX3CQ5U5Q3 659 aaKnown RBP11.4□□□□□ -0.58
SIN3A-209ENST00000568190 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.59
SIN3A-209ENST00000568190 COG3Q96JB2 828 aa11.39□□□□□ -0.59
SIN3A-209ENST00000568190 CAMTA1Q9Y6Y1 1673 aa11.39□□□□□ -0.59
SIN3A-209ENST00000568190 KIF24Q5T7B8 1368 aa11.39□□□□□ -0.59
SIN3A-209ENST00000568190 AFF2P51816 1311 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
SIN3A-209ENST00000568190 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 C8orf37Q96NL8 207 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 RTL1A6NKG5 1358 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
SIN3A-209ENST00000568190 ATRNO75882 1429 aa11.37□□□□□ -0.59
SIN3A-209ENST00000568190 FAM83GA6ND36 823 aa11.37□□□□□ -0.59
SIN3A-209ENST00000568190 ZNF772Q68DY9 489 aaPredicted RBP11.37□□□□□ -0.59
SIN3A-209ENST00000568190 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
SIN3A-209ENST00000568190 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
SIN3A-209ENST00000568190 COL5A2P05997 1499 aaPredicted RBP11.37□□□□□ -0.59
SIN3A-209ENST00000568190 WNK3Q9BYP7 1800 aa11.37□□□□□ -0.59
SIN3A-209ENST00000568190 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
SIN3A-209ENST00000568190 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
SIN3A-209ENST00000568190 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
SIN3A-209ENST00000568190 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms