RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PUS7Q96PZ0 661 aaKnown RBP24.15■■□□□ 1.46
COMMD4-220ENST00000567720 NINLQ9Y2I6 1382 aa24.14■■□□□ 1.45
COMMD4-220ENST00000567720 SLC24A1O60721 1099 aa24.13■■□□□ 1.45
COMMD4-220ENST00000567720 PLCH1Q4KWH8 1693 aa24.13■■□□□ 1.45
COMMD4-220ENST00000567720 NUTM2BA6NNL0 878 aaPredicted RBP24.12■■□□□ 1.45
COMMD4-220ENST00000567720 NUTM2EB1AL46 878 aaPredicted RBP24.12■■□□□ 1.45
COMMD4-220ENST00000567720 NUTM2AQ8IVF1 878 aaPredicted RBP24.12■■□□□ 1.45
COMMD4-220ENST00000567720 A0A1W2PP64 1363 aa24.12■■□□□ 1.45
COMMD4-220ENST00000567720 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
COMMD4-220ENST00000567720 KIF20BQ96Q89 1820 aa24.1■■□□□ 1.45
COMMD4-220ENST00000567720 KTN1Q86UP2 1357 aaKnown RBP24.09■■□□□ 1.45
COMMD4-220ENST00000567720 PAK3O75914 559 aaPredicted RBP24.09■■□□□ 1.45
COMMD4-220ENST00000567720 LMOD2Q6P5Q4 547 aa24.09■■□□□ 1.45
COMMD4-220ENST00000567720 TMC1Q8TDI8 760 aa24.08■■□□□ 1.45
COMMD4-220ENST00000567720 SLC12A5Q9H2X9 1139 aa24.08■■□□□ 1.45
COMMD4-220ENST00000567720 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
COMMD4-220ENST00000567720 SLIT3O75094 1523 aa24.06■■□□□ 1.44
COMMD4-220ENST00000567720 EDC4Q6P2E9 1401 aaKnown RBP24.06■■□□□ 1.44
COMMD4-220ENST00000567720 NWD2Q9ULI1 1742 aa24.06■■□□□ 1.44
COMMD4-220ENST00000567720 ANKRD36BQ8N2N9 1353 aa24.05■■□□□ 1.44
COMMD4-220ENST00000567720 NRAPQ86VF7 1730 aa24.05■■□□□ 1.44
COMMD4-220ENST00000567720 CABLES1Q8TDN4 633 aa24.05■■□□□ 1.44
COMMD4-220ENST00000567720 CDCA8Q53HL2 280 aa24.04■■□□□ 1.44
COMMD4-220ENST00000567720 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
COMMD4-220ENST00000567720 COL14A1Q05707 1796 aaKnown RBP24.03■■□□□ 1.44
COMMD4-220ENST00000567720 PLEKHG5O94827 1062 aa24.03■■□□□ 1.44
COMMD4-220ENST00000567720 ADAMTS2O95450 1211 aa24.03■■□□□ 1.44
COMMD4-220ENST00000567720 TTC21BQ7Z4L5 1316 aa24.03■■□□□ 1.44
COMMD4-220ENST00000567720 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
COMMD4-220ENST00000567720 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
COMMD4-220ENST00000567720 USP19O94966 1318 aa24.02■■□□□ 1.44
COMMD4-220ENST00000567720 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
COMMD4-220ENST00000567720 HDGFL2Q7Z4V5 671 aaPredicted RBP24.01■■□□□ 1.43
COMMD4-220ENST00000567720 TERF2IPQ9NYB0 399 aa24■■□□□ 1.43
COMMD4-220ENST00000567720 RGS17Q9UGC6 210 aaPredicted RBP24■■□□□ 1.43
COMMD4-220ENST00000567720 TTC21AQ8NDW8 1320 aa24■■□□□ 1.43
COMMD4-220ENST00000567720 C11orf95C9JLR9 678 aaPredicted RBP23.99■■□□□ 1.43
COMMD4-220ENST00000567720 ABTB2Q8N961 1025 aa23.99■■□□□ 1.43
COMMD4-220ENST00000567720 C8orf37Q96NL8 207 aa23.99■■□□□ 1.43
COMMD4-220ENST00000567720 LMO7Q8WWI1 1683 aa23.99■■□□□ 1.43
COMMD4-220ENST00000567720 LTN1O94822 1766 aa23.98■■□□□ 1.43
COMMD4-220ENST00000567720 SLIT2O94813 1529 aa23.98■■□□□ 1.43
COMMD4-220ENST00000567720 NFAT5O94916 1531 aa23.98■■□□□ 1.43
COMMD4-220ENST00000567720 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
COMMD4-220ENST00000567720 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
COMMD4-220ENST00000567720 AFF2P51816 1311 aa23.97■■□□□ 1.43
COMMD4-220ENST00000567720 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
COMMD4-220ENST00000567720 HAP1P54257 671 aaPredicted RBP23.96■■□□□ 1.43
COMMD4-220ENST00000567720 POLR3GLQ9BT43 218 aa23.95■■□□□ 1.42
COMMD4-220ENST00000567720 KIF7Q2M1P5 1343 aa23.94■■□□□ 1.42
COMMD4-220ENST00000567720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.94■■□□□ 1.42
COMMD4-220ENST00000567720 COL18A1P39060 1754 aa23.93■■□□□ 1.42
COMMD4-220ENST00000567720 USP31Q70CQ4 1352 aa23.93■■□□□ 1.42
COMMD4-220ENST00000567720 RGPD5Q99666 1765 aa23.93■■□□□ 1.42
COMMD4-220ENST00000567720 BCL9LQ86UU0 1499 aa23.93■■□□□ 1.42
COMMD4-220ENST00000567720 NSD3Q9BZ95 1437 aa23.93■■□□□ 1.42
COMMD4-220ENST00000567720 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
COMMD4-220ENST00000567720 NME9Q86XW9 330 aa23.92■■□□□ 1.42
COMMD4-220ENST00000567720 KIAA0232Q92628 1395 aa23.91■■□□□ 1.42
COMMD4-220ENST00000567720 NLRP6P59044 892 aa23.91■■□□□ 1.42
COMMD4-220ENST00000567720 NGLY1Q96IV0 654 aa23.9■■□□□ 1.42
COMMD4-220ENST00000567720 ZRANB1Q9UGI0 708 aa23.9■■□□□ 1.42
COMMD4-220ENST00000567720 POTEAQ6S8J7 498 aa23.89■■□□□ 1.41
COMMD4-220ENST00000567720 FNBP4Q8N3X1 1017 aaPredicted RBP23.89■■□□□ 1.41
COMMD4-220ENST00000567720 CPDO75976 1380 aa23.89■■□□□ 1.41
COMMD4-220ENST00000567720 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
COMMD4-220ENST00000567720 ATRNO75882 1429 aa23.87■■□□□ 1.41
COMMD4-220ENST00000567720 ZNF772Q68DY9 489 aaPredicted RBP23.87■■□□□ 1.41
COMMD4-220ENST00000567720 GLI3P10071 1580 aa23.86■■□□□ 1.41
COMMD4-220ENST00000567720 ABCC6O95255 1503 aa23.86■■□□□ 1.41
COMMD4-220ENST00000567720 GCP02774 474 aa23.86■■□□□ 1.41
COMMD4-220ENST00000567720 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
COMMD4-220ENST00000567720 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
COMMD4-220ENST00000567720 ZC3H6P61129 1189 aaKnown RBP23.85■■□□□ 1.41
COMMD4-220ENST00000567720 USP21Q9UK80 565 aa23.85■■□□□ 1.41
COMMD4-220ENST00000567720 CAMTA1Q9Y6Y1 1673 aa23.85■■□□□ 1.41
COMMD4-220ENST00000567720 FAM83GA6ND36 823 aa23.84■■□□□ 1.41
COMMD4-220ENST00000567720 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
COMMD4-220ENST00000567720 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
COMMD4-220ENST00000567720 CHRNA2Q15822 529 aa23.82■■□□□ 1.4
COMMD4-220ENST00000567720 ILDR2Q71H61 639 aa23.81■■□□□ 1.4
COMMD4-220ENST00000567720 WNK3Q9BYP7 1800 aa23.81■■□□□ 1.4
COMMD4-220ENST00000567720 SOX12O15370 315 aa23.8■■□□□ 1.4
COMMD4-220ENST00000567720 COL5A2P05997 1499 aaPredicted RBP23.8■■□□□ 1.4
COMMD4-220ENST00000567720 FYB1O15117 783 aa23.79■■□□□ 1.4
COMMD4-220ENST00000567720 UNC5CLQ8IV45 518 aa23.79■■□□□ 1.4
COMMD4-220ENST00000567720 KCNH5Q8NCM2 988 aa23.79■■□□□ 1.4
COMMD4-220ENST00000567720 PANK3Q9H999 370 aa23.79■■□□□ 1.4
COMMD4-220ENST00000567720 PEAK1Q9H792 1746 aa23.79■■□□□ 1.4
COMMD4-220ENST00000567720 GGNBP2Q9H3C7 697 aa23.78■■□□□ 1.4
COMMD4-220ENST00000567720 BTG4Q9NY30 223 aa23.78■■□□□ 1.4
COMMD4-220ENST00000567720 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
COMMD4-220ENST00000567720 AATKQ6ZMQ8 1374 aa23.77■■□□□ 1.4
COMMD4-220ENST00000567720 RGS12O14924 1447 aa23.76■■□□□ 1.39
COMMD4-220ENST00000567720 MAP2P11137 1827 aaKnown RBP23.76■■□□□ 1.39
COMMD4-220ENST00000567720 COG3Q96JB2 828 aa23.76■■□□□ 1.39
COMMD4-220ENST00000567720 TRPC5Q9UL62 973 aaPredicted RBP23.76■■□□□ 1.39
COMMD4-220ENST00000567720 BRWD3Q6RI45 1802 aa23.75■■□□□ 1.39
COMMD4-220ENST00000567720 ARHGEF25Q86VW2 580 aa23.75■■□□□ 1.39
COMMD4-220ENST00000567720 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms