RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 ADAMTS8Q9UP79 889 aa14.47□□□□□ -0.09
VPS9D1-206ENST00000567379 ANKARQ7Z5J8 1434 aa14.47□□□□□ -0.09
VPS9D1-206ENST00000567379 MTHFSP49914 203 aa14.46□□□□□ -0.09
VPS9D1-206ENST00000567379 ACEP12821 1306 aa14.45□□□□□ -0.1
VPS9D1-206ENST00000567379 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
VPS9D1-206ENST00000567379 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
VPS9D1-206ENST00000567379 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
VPS9D1-206ENST00000567379 NALCNQ8IZF0 1738 aa14.43□□□□□ -0.1
VPS9D1-206ENST00000567379 ADGRL3Q9HAR2 1447 aa14.42□□□□□ -0.1
VPS9D1-206ENST00000567379 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
VPS9D1-206ENST00000567379 NGDNQ8NEJ9 315 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-206ENST00000567379 COG3Q96JB2 828 aa14.42□□□□□ -0.1
VPS9D1-206ENST00000567379 RGPD8O14715 1765 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-206ENST00000567379 TTC21BQ7Z4L5 1316 aa14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 USP6P35125 1406 aa14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 NEFLP07196 543 aa14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 C14orf37Q86TY3 774 aa14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 NME9Q86XW9 330 aa14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 NKTRP30414 1462 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 SHPRHQ149N8 1683 aa14.41□□□□□ -0.1
VPS9D1-206ENST00000567379 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
VPS9D1-206ENST00000567379 PROSER2Q86WR7 435 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-206ENST00000567379 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
VPS9D1-206ENST00000567379 TTC21AQ8NDW8 1320 aa14.4□□□□□ -0.1
VPS9D1-206ENST00000567379 SENP3-EIF4A1A0A087X0R7 540 aa14.39□□□□□ -0.11
VPS9D1-206ENST00000567379 NGEFQ8N5V2 710 aa14.39□□□□□ -0.11
VPS9D1-206ENST00000567379 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
VPS9D1-206ENST00000567379 SALL2Q9Y467 1007 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-206ENST00000567379 POTEAQ6S8J7 498 aa14.38□□□□□ -0.11
VPS9D1-206ENST00000567379 AATKQ6ZMQ8 1374 aa14.37□□□□□ -0.11
VPS9D1-206ENST00000567379 MAP2P11137 1827 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-206ENST00000567379 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
VPS9D1-206ENST00000567379 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
VPS9D1-206ENST00000567379 RUNDC1Q96C34 613 aa14.36□□□□□ -0.11
VPS9D1-206ENST00000567379 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
VPS9D1-206ENST00000567379 PHF8Q9UPP1 1060 aa14.36□□□□□ -0.11
VPS9D1-206ENST00000567379 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-206ENST00000567379 RBM33Q96EV2 1170 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-206ENST00000567379 POLKQ9UBT6 870 aa14.35□□□□□ -0.11
VPS9D1-206ENST00000567379 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-206ENST00000567379 COL3A1P02461 1466 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-206ENST00000567379 PNPLA6Q8IY17 1366 aa14.34□□□□□ -0.11
VPS9D1-206ENST00000567379 APAF1O14727 1248 aa14.34□□□□□ -0.11
VPS9D1-206ENST00000567379 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-206ENST00000567379 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS9D1-206ENST00000567379 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.11
VPS9D1-206ENST00000567379 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.11
VPS9D1-206ENST00000567379 NCOA3Q9Y6Q9 1424 aa14.33□□□□□ -0.11
VPS9D1-206ENST00000567379 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-206ENST00000567379 PNNQ9H307 717 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-206ENST00000567379 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-206ENST00000567379 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-206ENST00000567379 FKBP8Q14318 412 aa14.32□□□□□ -0.12
VPS9D1-206ENST00000567379 C19orf44Q9H6X5 657 aa14.32□□□□□ -0.12
VPS9D1-206ENST00000567379 USP31Q70CQ4 1352 aa14.32□□□□□ -0.12
VPS9D1-206ENST00000567379 ESCO1Q5FWF5 840 aa14.31□□□□□ -0.12
VPS9D1-206ENST00000567379 STRCP1A6NGW2 1772 aa14.3□□□□□ -0.12
VPS9D1-206ENST00000567379 FBLN1P23142 703 aa14.3□□□□□ -0.12
VPS9D1-206ENST00000567379 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
VPS9D1-206ENST00000567379 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-206ENST00000567379 EMILIN1Q9Y6C2 1016 aa14.3□□□□□ -0.12
VPS9D1-206ENST00000567379 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
VPS9D1-206ENST00000567379 ATF3P18847 181 aa14.29□□□□□ -0.12
VPS9D1-206ENST00000567379 PSME1Q06323 249 aa14.29□□□□□ -0.12
VPS9D1-206ENST00000567379 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
VPS9D1-206ENST00000567379 TMEM94Q12767 1356 aa14.29□□□□□ -0.12
VPS9D1-206ENST00000567379 PIK3C2AO00443 1686 aa14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 DCCP43146 1447 aa14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 NLRP6P59044 892 aa14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 RRS1Q15050 365 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 UPF1Q92900 1129 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 CDCA7LQ96GN5 454 aa14.28□□□□□ -0.12
VPS9D1-206ENST00000567379 KIF1AQ12756 1690 aa14.27□□□□□ -0.12
VPS9D1-206ENST00000567379 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
VPS9D1-206ENST00000567379 FCHSD2O94868 740 aa14.27□□□□□ -0.13
VPS9D1-206ENST00000567379 NEFMP07197 916 aa14.27□□□□□ -0.13
VPS9D1-206ENST00000567379 C1orf167Q5SNV9 1468 aa14.26□□□□□ -0.13
VPS9D1-206ENST00000567379 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
VPS9D1-206ENST00000567379 MSH6P52701 1360 aa14.25□□□□□ -0.13
VPS9D1-206ENST00000567379 IL13P35225 146 aa14.25□□□□□ -0.13
VPS9D1-206ENST00000567379 SLFN5Q08AF3 891 aa14.25□□□□□ -0.13
VPS9D1-206ENST00000567379 CCDC27Q2M243 656 aa14.25□□□□□ -0.13
VPS9D1-206ENST00000567379 ERICH6BQ5W0A0 696 aa14.25□□□□□ -0.13
VPS9D1-206ENST00000567379 CADPS2Q86UW7 1296 aa14.25□□□□□ -0.13
VPS9D1-206ENST00000567379 E9PSI1 815 aa14.24□□□□□ -0.13
VPS9D1-206ENST00000567379 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
VPS9D1-206ENST00000567379 PLEKHF1Q96S99 279 aa14.24□□□□□ -0.13
VPS9D1-206ENST00000567379 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
VPS9D1-206ENST00000567379 RCAN3Q9UKA8 241 aa14.24□□□□□ -0.13
VPS9D1-206ENST00000567379 SOX12O15370 315 aa14.23□□□□□ -0.13
VPS9D1-206ENST00000567379 WDR63Q8IWG1 891 aa14.23□□□□□ -0.13
VPS9D1-206ENST00000567379 WWC1Q8IX03 1113 aa14.23□□□□□ -0.13
VPS9D1-206ENST00000567379 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-206ENST00000567379 MST1RQ04912 1400 aa14.23□□□□□ -0.13
VPS9D1-206ENST00000567379 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
VPS9D1-206ENST00000567379 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms