RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 HSPA5P11021 654 aaKnown RBP17.45■□□□□ 0.38
RNF40-211ENST00000567365 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
RNF40-211ENST00000567365 TMF1P82094 1093 aa17.43■□□□□ 0.38
RNF40-211ENST00000567365 MARF1Q9Y4F3 1742 aaKnown RBP17.43■□□□□ 0.38
RNF40-211ENST00000567365 NINLQ9Y2I6 1382 aa17.42■□□□□ 0.38
RNF40-211ENST00000567365 SLC12A5Q9H2X9 1139 aa17.42■□□□□ 0.38
RNF40-211ENST00000567365 MYOM1P52179 1685 aa17.42■□□□□ 0.38
RNF40-211ENST00000567365 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
RNF40-211ENST00000567365 PIK3C2AO00443 1686 aa17.4■□□□□ 0.38
RNF40-211ENST00000567365 NUTM2BA6NNL0 878 aaPredicted RBP17.4■□□□□ 0.38
RNF40-211ENST00000567365 NUTM2EB1AL46 878 aaPredicted RBP17.4■□□□□ 0.38
RNF40-211ENST00000567365 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
RNF40-211ENST00000567365 NUTM2AQ8IVF1 878 aaPredicted RBP17.4■□□□□ 0.38
RNF40-211ENST00000567365 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNF40-211ENST00000567365 PHRF1Q9P1Y6 1649 aaKnown RBP17.39■□□□□ 0.37
RNF40-211ENST00000567365 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
RNF40-211ENST00000567365 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
RNF40-211ENST00000567365 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
RNF40-211ENST00000567365 TTC21BQ7Z4L5 1316 aa17.38■□□□□ 0.37
RNF40-211ENST00000567365 USP54Q70EL1 1684 aa17.38■□□□□ 0.37
RNF40-211ENST00000567365 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
RNF40-211ENST00000567365 USP19O94966 1318 aa17.37■□□□□ 0.37
RNF40-211ENST00000567365 KTN1Q86UP2 1357 aaKnown RBP17.37■□□□□ 0.37
RNF40-211ENST00000567365 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
RNF40-211ENST00000567365 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
RNF40-211ENST00000567365 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
RNF40-211ENST00000567365 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
RNF40-211ENST00000567365 LMOD2Q6P5Q4 547 aa17.35■□□□□ 0.37
RNF40-211ENST00000567365 FNBP4Q8N3X1 1017 aaPredicted RBP17.35■□□□□ 0.37
RNF40-211ENST00000567365 TMC1Q8TDI8 760 aa17.35■□□□□ 0.37
RNF40-211ENST00000567365 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
RNF40-211ENST00000567365 EDC4Q6P2E9 1401 aaKnown RBP17.35■□□□□ 0.37
RNF40-211ENST00000567365 SLIT3O75094 1523 aa17.35■□□□□ 0.37
RNF40-211ENST00000567365 SLIT2O94813 1529 aa17.34■□□□□ 0.37
RNF40-211ENST00000567365 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
RNF40-211ENST00000567365 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
RNF40-211ENST00000567365 RXRBP28702 533 aa17.33■□□□□ 0.36
RNF40-211ENST00000567365 USP31Q70CQ4 1352 aa17.32■□□□□ 0.36
RNF40-211ENST00000567365 AFF2P51816 1311 aa17.32■□□□□ 0.36
RNF40-211ENST00000567365 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
RNF40-211ENST00000567365 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
RNF40-211ENST00000567365 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
RNF40-211ENST00000567365 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
RNF40-211ENST00000567365 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
RNF40-211ENST00000567365 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
RNF40-211ENST00000567365 NLRP13Q86W25 1043 aa17.3■□□□□ 0.36
RNF40-211ENST00000567365 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
RNF40-211ENST00000567365 COL14A1Q05707 1796 aaKnown RBP17.29■□□□□ 0.36
RNF40-211ENST00000567365 NRAPQ86VF7 1730 aa17.29■□□□□ 0.36
RNF40-211ENST00000567365 OVOS2A0A0J9YW53 1432 aa17.29■□□□□ 0.36
RNF40-211ENST00000567365 OVOS2Q6IE36 1432 aa17.29■□□□□ 0.36
RNF40-211ENST00000567365 CPDO75976 1380 aa17.28■□□□□ 0.36
RNF40-211ENST00000567365 NFAT5O94916 1531 aa17.28■□□□□ 0.36
RNF40-211ENST00000567365 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
RNF40-211ENST00000567365 CARD14Q9BXL6 1004 aa17.28■□□□□ 0.36
RNF40-211ENST00000567365 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 GCP02774 474 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 NLRP6P59044 892 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 NME9Q86XW9 330 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.36
RNF40-211ENST00000567365 KIAA0232Q92628 1395 aa17.27■□□□□ 0.35
RNF40-211ENST00000567365 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
RNF40-211ENST00000567365 ATRNO75882 1429 aa17.26■□□□□ 0.35
RNF40-211ENST00000567365 COL18A1P39060 1754 aa17.25■□□□□ 0.35
RNF40-211ENST00000567365 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
RNF40-211ENST00000567365 QTRT2Q9H974 415 aaKnown RBP17.25■□□□□ 0.35
RNF40-211ENST00000567365 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
RNF40-211ENST00000567365 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
RNF40-211ENST00000567365 USP21Q9UK80 565 aa17.24■□□□□ 0.35
RNF40-211ENST00000567365 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
RNF40-211ENST00000567365 KIF20BQ96Q89 1820 aa17.23■□□□□ 0.35
RNF40-211ENST00000567365 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
RNF40-211ENST00000567365 RGS12O14924 1447 aa17.22■□□□□ 0.35
RNF40-211ENST00000567365 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
RNF40-211ENST00000567365 FYB1O15117 783 aa17.22■□□□□ 0.35
RNF40-211ENST00000567365 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
RNF40-211ENST00000567365 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
RNF40-211ENST00000567365 CAMTA1Q9Y6Y1 1673 aa17.22■□□□□ 0.35
RNF40-211ENST00000567365 ARHGEF25Q86VW2 580 aa17.21■□□□□ 0.35
RNF40-211ENST00000567365 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
RNF40-211ENST00000567365 AATKQ6ZMQ8 1374 aa17.2■□□□□ 0.34
RNF40-211ENST00000567365 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
RNF40-211ENST00000567365 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
RNF40-211ENST00000567365 ABCC6O95255 1503 aa17.2■□□□□ 0.34
RNF40-211ENST00000567365 GLI3P10071 1580 aa17.19■□□□□ 0.34
RNF40-211ENST00000567365 CHRNA2Q15822 529 aa17.19■□□□□ 0.34
RNF40-211ENST00000567365 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
RNF40-211ENST00000567365 PANK3Q9H999 370 aa17.19■□□□□ 0.34
RNF40-211ENST00000567365 BTG4Q9NY30 223 aa17.19■□□□□ 0.34
RNF40-211ENST00000567365 TRPC5Q9UL62 973 aaPredicted RBP17.19■□□□□ 0.34
RNF40-211ENST00000567365 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
RNF40-211ENST00000567365 VPS72Q15906 364 aa17.17■□□□□ 0.34
RNF40-211ENST00000567365 LTN1O94822 1766 aa17.17■□□□□ 0.34
RNF40-211ENST00000567365 ANKRD26Q9UPS8 1709 aa17.16■□□□□ 0.34
RNF40-211ENST00000567365 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
RNF40-211ENST00000567365 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
RNF40-211ENST00000567365 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
RNF40-211ENST00000567365 COG3Q96JB2 828 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms