RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 USP6P35125 1406 aa15.59■□□□□ 0.09
BBS4-213ENST00000567279 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
BBS4-213ENST00000567279 COL3A1P02461 1466 aaPredicted RBP15.58■□□□□ 0.09
BBS4-213ENST00000567279 ADGRL3Q9HAR2 1447 aa15.58■□□□□ 0.08
BBS4-213ENST00000567279 MAP2P11137 1827 aaKnown RBP15.57■□□□□ 0.08
BBS4-213ENST00000567279 PMFBP1Q8TBY8 1022 aa15.57■□□□□ 0.08
BBS4-213ENST00000567279 RBM33Q96EV2 1170 aaKnown RBP15.57■□□□□ 0.08
BBS4-213ENST00000567279 KDM4FA0A1W2PPD8 638 aa15.57■□□□□ 0.08
BBS4-213ENST00000567279 FKBP8Q14318 412 aa15.57■□□□□ 0.08
BBS4-213ENST00000567279 ZRANB1Q9UGI0 708 aa15.57■□□□□ 0.08
BBS4-213ENST00000567279 TTC21BQ7Z4L5 1316 aa15.56■□□□□ 0.08
BBS4-213ENST00000567279 COG3Q96JB2 828 aa15.56■□□□□ 0.08
BBS4-213ENST00000567279 PDE3BQ13370 1112 aa15.55■□□□□ 0.08
BBS4-213ENST00000567279 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
BBS4-213ENST00000567279 HSPA2P54652 639 aa15.54■□□□□ 0.08
BBS4-213ENST00000567279 C14orf37Q86TY3 774 aa15.54■□□□□ 0.08
BBS4-213ENST00000567279 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
BBS4-213ENST00000567279 OVOS2A0A0J9YW53 1432 aa15.53■□□□□ 0.08
BBS4-213ENST00000567279 OVOS2Q6IE36 1432 aa15.53■□□□□ 0.08
BBS4-213ENST00000567279 SSH2Q76I76 1423 aa15.53■□□□□ 0.08
BBS4-213ENST00000567279 APAF1O14727 1248 aa15.52■□□□□ 0.08
BBS4-213ENST00000567279 STRCP1A6NGW2 1772 aa15.52■□□□□ 0.07
BBS4-213ENST00000567279 PIK3C2AO00443 1686 aa15.52■□□□□ 0.07
BBS4-213ENST00000567279 IQSEC2Q5JU85 1478 aa15.52■□□□□ 0.07
BBS4-213ENST00000567279 FBLN1P23142 703 aa15.52■□□□□ 0.07
BBS4-213ENST00000567279 CDK12Q9NYV4 1490 aaPredicted RBP15.51■□□□□ 0.07
BBS4-213ENST00000567279 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
BBS4-213ENST00000567279 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
BBS4-213ENST00000567279 U2AF1L5P0DN76 240 aaPredicted RBP15.51■□□□□ 0.07
BBS4-213ENST00000567279 U2AF1Q01081 240 aaKnown RBP eCLIP15.51■□□□□ 0.07
BBS4-213ENST00000567279 POLKQ9UBT6 870 aa15.51■□□□□ 0.07
BBS4-213ENST00000567279 TTC21AQ8NDW8 1320 aa15.51■□□□□ 0.07
BBS4-213ENST00000567279 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
BBS4-213ENST00000567279 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
BBS4-213ENST00000567279 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
BBS4-213ENST00000567279 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
BBS4-213ENST00000567279 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
BBS4-213ENST00000567279 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
BBS4-213ENST00000567279 DIAPH1O60610 1272 aaKnown RBP15.49■□□□□ 0.07
BBS4-213ENST00000567279 STRCQ7RTU9 1775 aa15.48■□□□□ 0.07
BBS4-213ENST00000567279 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
BBS4-213ENST00000567279 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
BBS4-213ENST00000567279 PHF8Q9UPP1 1060 aa15.48■□□□□ 0.07
BBS4-213ENST00000567279 RRS1Q15050 365 aaKnown RBP15.47■□□□□ 0.07
BBS4-213ENST00000567279 NGEFQ8N5V2 710 aa15.46■□□□□ 0.07
BBS4-213ENST00000567279 USP54Q70EL1 1684 aa15.46■□□□□ 0.07
BBS4-213ENST00000567279 MARF1Q9Y4F3 1742 aaKnown RBP15.46■□□□□ 0.07
BBS4-213ENST00000567279 LRRC7Q96NW7 1537 aa15.46■□□□□ 0.07
BBS4-213ENST00000567279 GOLGA2Q08379 1002 aa15.46■□□□□ 0.06
BBS4-213ENST00000567279 PEAK1Q9H792 1746 aa15.45■□□□□ 0.06
BBS4-213ENST00000567279 TCP11L2Q8N4U5 519 aa15.45■□□□□ 0.06
BBS4-213ENST00000567279 USP31Q70CQ4 1352 aa15.45■□□□□ 0.06
BBS4-213ENST00000567279 ESCO1Q5FWF5 840 aa15.44■□□□□ 0.06
BBS4-213ENST00000567279 RRP7AQ9Y3A4 280 aaKnown RBP15.44■□□□□ 0.06
BBS4-213ENST00000567279 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
BBS4-213ENST00000567279 TMEM94Q12767 1356 aa15.44■□□□□ 0.06
BBS4-213ENST00000567279 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
BBS4-213ENST00000567279 SOX12O15370 315 aa15.43■□□□□ 0.06
BBS4-213ENST00000567279 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
BBS4-213ENST00000567279 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
BBS4-213ENST00000567279 RCAN3Q9UKA8 241 aa15.42■□□□□ 0.06
BBS4-213ENST00000567279 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
BBS4-213ENST00000567279 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
BBS4-213ENST00000567279 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
BBS4-213ENST00000567279 PLEKHF1Q96S99 279 aa15.41■□□□□ 0.06
BBS4-213ENST00000567279 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
BBS4-213ENST00000567279 C1orf167Q5SNV9 1468 aa15.41■□□□□ 0.06
BBS4-213ENST00000567279 NLRP6P59044 892 aa15.4■□□□□ 0.06
BBS4-213ENST00000567279 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
BBS4-213ENST00000567279 NUTM2GQ5VZR2 741 aa15.4■□□□□ 0.06
BBS4-213ENST00000567279 XIRP1Q702N8 1843 aaKnown RBP15.4■□□□□ 0.06
BBS4-213ENST00000567279 IL13P35225 146 aa15.4■□□□□ 0.06
BBS4-213ENST00000567279 ORAI2Q96SN7 254 aa15.4■□□□□ 0.06
BBS4-213ENST00000567279 PNNQ9H307 717 aaKnown RBP15.4■□□□□ 0.06
BBS4-213ENST00000567279 DCCP43146 1447 aa15.39■□□□□ 0.05
BBS4-213ENST00000567279 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
BBS4-213ENST00000567279 E9PSI1 815 aa15.39■□□□□ 0.05
BBS4-213ENST00000567279 PSME1Q06323 249 aa15.39■□□□□ 0.05
BBS4-213ENST00000567279 ABTB2Q8N961 1025 aa15.39■□□□□ 0.05
BBS4-213ENST00000567279 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
BBS4-213ENST00000567279 RSPH6AQ9H0K4 717 aa15.38■□□□□ 0.05
BBS4-213ENST00000567279 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
BBS4-213ENST00000567279 FCHSD2O94868 740 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 HMOX1P09601 288 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 ATF3P18847 181 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 PRKAR2BP31323 418 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 MST1RQ04912 1400 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 CCDC27Q2M243 656 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
BBS4-213ENST00000567279 MAP3K19Q56UN5 1328 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
BBS4-213ENST00000567279 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
BBS4-213ENST00000567279 LTN1O94822 1766 aa15.36■□□□□ 0.05
BBS4-213ENST00000567279 NEFMP07197 916 aa15.36■□□□□ 0.05
BBS4-213ENST00000567279 TMPOP42166 694 aaKnown RBP15.36■□□□□ 0.05
BBS4-213ENST00000567279 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
BBS4-213ENST00000567279 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
BBS4-213ENST00000567279 TRMT2AQ8IZ69 625 aaKnown RBP15.36■□□□□ 0.05
BBS4-213ENST00000567279 FLT4P35916 1363 aa15.36■□□□□ 0.05
BBS4-213ENST00000567279 RGPD1P0DJD0 1748 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms