RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 TMF1P82094 1093 aa21.98■■□□□ 1.11
COMMD4-217ENST00000567195 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
COMMD4-217ENST00000567195 CABLES1Q8TDN4 633 aa21.96■■□□□ 1.11
COMMD4-217ENST00000567195 AFF2P51816 1311 aa21.96■■□□□ 1.11
COMMD4-217ENST00000567195 BRD4O60885 1362 aaPredicted RBP21.96■■□□□ 1.11
COMMD4-217ENST00000567195 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
COMMD4-217ENST00000567195 POTEAQ6S8J7 498 aa21.95■■□□□ 1.1
COMMD4-217ENST00000567195 TMC1Q8TDI8 760 aa21.95■■□□□ 1.1
COMMD4-217ENST00000567195 USP6P35125 1406 aa21.93■■□□□ 1.1
COMMD4-217ENST00000567195 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
COMMD4-217ENST00000567195 CDCA8Q53HL2 280 aa21.93■■□□□ 1.1
COMMD4-217ENST00000567195 ABTB2Q8N961 1025 aa21.93■■□□□ 1.1
COMMD4-217ENST00000567195 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
COMMD4-217ENST00000567195 RXRBP28702 533 aa21.91■■□□□ 1.1
COMMD4-217ENST00000567195 NUTM2GQ5VZR2 741 aa21.9■■□□□ 1.1
COMMD4-217ENST00000567195 HDGFL2Q7Z4V5 671 aaPredicted RBP21.9■■□□□ 1.1
COMMD4-217ENST00000567195 SLC12A5Q9H2X9 1139 aa21.9■■□□□ 1.1
COMMD4-217ENST00000567195 KTN1Q86UP2 1357 aaKnown RBP21.89■■□□□ 1.1
COMMD4-217ENST00000567195 TERF2IPQ9NYB0 399 aa21.89■■□□□ 1.09
COMMD4-217ENST00000567195 CPSF1Q10570 1443 aaKnown RBP21.89■■□□□ 1.09
COMMD4-217ENST00000567195 NINLQ9Y2I6 1382 aa21.88■■□□□ 1.09
COMMD4-217ENST00000567195 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
COMMD4-217ENST00000567195 FNBP4Q8N3X1 1017 aaPredicted RBP21.88■■□□□ 1.09
COMMD4-217ENST00000567195 QTRT2Q9H974 415 aaKnown RBP21.88■■□□□ 1.09
COMMD4-217ENST00000567195 USP21Q9UK80 565 aa21.88■■□□□ 1.09
COMMD4-217ENST00000567195 AKAP12Q02952 1782 aa21.87■■□□□ 1.09
COMMD4-217ENST00000567195 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
COMMD4-217ENST00000567195 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
COMMD4-217ENST00000567195 TTC21BQ7Z4L5 1316 aa21.86■■□□□ 1.09
COMMD4-217ENST00000567195 TTC21AQ8NDW8 1320 aa21.85■■□□□ 1.09
COMMD4-217ENST00000567195 RBM6P78332 1123 aaKnown RBP21.85■■□□□ 1.09
COMMD4-217ENST00000567195 TRPC5Q9UL62 973 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-217ENST00000567195 SSH2Q76I76 1423 aa21.85■■□□□ 1.09
COMMD4-217ENST00000567195 NLRP6P59044 892 aa21.84■■□□□ 1.09
COMMD4-217ENST00000567195 CD163L1Q9NR16 1453 aa21.83■■□□□ 1.08
COMMD4-217ENST00000567195 USP19O94966 1318 aa21.81■■□□□ 1.08
COMMD4-217ENST00000567195 CRYBG1Q9Y4K1 1723 aa21.81■■□□□ 1.08
COMMD4-217ENST00000567195 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
COMMD4-217ENST00000567195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.81■■□□□ 1.08
COMMD4-217ENST00000567195 A0A1W2PP64 1363 aa21.81■■□□□ 1.08
COMMD4-217ENST00000567195 CDK12Q9NYV4 1490 aaPredicted RBP21.81■■□□□ 1.08
COMMD4-217ENST00000567195 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
COMMD4-217ENST00000567195 UNC5CLQ8IV45 518 aa21.8■■□□□ 1.08
COMMD4-217ENST00000567195 PRDM11Q9NQV5 511 aa21.8■■□□□ 1.08
COMMD4-217ENST00000567195 PHRF1Q9P1Y6 1649 aaKnown RBP21.8■■□□□ 1.08
COMMD4-217ENST00000567195 SLIT2O94813 1529 aa21.8■■□□□ 1.08
COMMD4-217ENST00000567195 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
COMMD4-217ENST00000567195 BCL9LQ86UU0 1499 aa21.79■■□□□ 1.08
COMMD4-217ENST00000567195 GCP02774 474 aa21.79■■□□□ 1.08
COMMD4-217ENST00000567195 ZC3H6P61129 1189 aaKnown RBP21.79■■□□□ 1.08
COMMD4-217ENST00000567195 NRKQ7Z2Y5 1582 aa21.78■■□□□ 1.08
COMMD4-217ENST00000567195 ANKRD36BQ8N2N9 1353 aa21.78■■□□□ 1.08
COMMD4-217ENST00000567195 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
COMMD4-217ENST00000567195 KIAA0232Q92628 1395 aa21.77■■□□□ 1.08
COMMD4-217ENST00000567195 PIK3C2AO00443 1686 aa21.77■■□□□ 1.08
COMMD4-217ENST00000567195 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.77■■□□□ 1.08
COMMD4-217ENST00000567195 ATRNO75882 1429 aa21.76■■□□□ 1.07
COMMD4-217ENST00000567195 BTG4Q9NY30 223 aa21.76■■□□□ 1.07
COMMD4-217ENST00000567195 NWD2Q9ULI1 1742 aa21.76■■□□□ 1.07
COMMD4-217ENST00000567195 COL14A1Q05707 1796 aaKnown RBP21.76■■□□□ 1.07
COMMD4-217ENST00000567195 KCNH5Q8NCM2 988 aa21.75■■□□□ 1.07
COMMD4-217ENST00000567195 PLCH1Q4KWH8 1693 aa21.75■■□□□ 1.07
COMMD4-217ENST00000567195 CHRNA2Q15822 529 aa21.74■■□□□ 1.07
COMMD4-217ENST00000567195 NME9Q86XW9 330 aa21.74■■□□□ 1.07
COMMD4-217ENST00000567195 SLIT3O75094 1523 aa21.73■■□□□ 1.07
COMMD4-217ENST00000567195 CPDO75976 1380 aa21.73■■□□□ 1.07
COMMD4-217ENST00000567195 GJD4Q96KN9 370 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-217ENST00000567195 CCDC9Q9Y3X0 531 aaKnown RBP21.72■■□□□ 1.07
COMMD4-217ENST00000567195 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
COMMD4-217ENST00000567195 ZBTB7CA1YPR0 619 aa21.71■■□□□ 1.07
COMMD4-217ENST00000567195 VPS72Q15906 364 aa21.71■■□□□ 1.07
COMMD4-217ENST00000567195 ZRANB1Q9UGI0 708 aa21.71■■□□□ 1.07
COMMD4-217ENST00000567195 SOX12O15370 315 aa21.7■■□□□ 1.06
COMMD4-217ENST00000567195 EVA1CP58658 441 aa21.68■■□□□ 1.06
COMMD4-217ENST00000567195 MYOM1P52179 1685 aa21.68■■□□□ 1.06
COMMD4-217ENST00000567195 COG3Q96JB2 828 aa21.67■■□□□ 1.06
COMMD4-217ENST00000567195 STRN4Q9NRL3 753 aa21.66■■□□□ 1.06
COMMD4-217ENST00000567195 NRAPQ86VF7 1730 aa21.66■■□□□ 1.06
COMMD4-217ENST00000567195 C11orf95C9JLR9 678 aaPredicted RBP21.65■■□□□ 1.06
COMMD4-217ENST00000567195 ARHGEF25Q86VW2 580 aa21.65■■□□□ 1.06
COMMD4-217ENST00000567195 USP54Q70EL1 1684 aa21.65■■□□□ 1.06
COMMD4-217ENST00000567195 RGS12O14924 1447 aa21.64■■□□□ 1.06
COMMD4-217ENST00000567195 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
COMMD4-217ENST00000567195 OVOS2A0A0J9YW53 1432 aa21.63■■□□□ 1.05
COMMD4-217ENST00000567195 OVOS2Q6IE36 1432 aa21.63■■□□□ 1.05
COMMD4-217ENST00000567195 FYB1O15117 783 aa21.63■■□□□ 1.05
COMMD4-217ENST00000567195 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
COMMD4-217ENST00000567195 CAMTA1Q9Y6Y1 1673 aa21.62■■□□□ 1.05
COMMD4-217ENST00000567195 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
COMMD4-217ENST00000567195 GLI3P10071 1580 aa21.61■■□□□ 1.05
COMMD4-217ENST00000567195 SPATA31A5Q5VU36 1347 aa21.61■■□□□ 1.05
COMMD4-217ENST00000567195 SPATA31A7Q8IWB4 1347 aa21.61■■□□□ 1.05
COMMD4-217ENST00000567195 NFAT5O94916 1531 aa21.61■■□□□ 1.05
COMMD4-217ENST00000567195 LMO7Q8WWI1 1683 aa21.61■■□□□ 1.05
COMMD4-217ENST00000567195 GGNBP2Q9H3C7 697 aa21.61■■□□□ 1.05
COMMD4-217ENST00000567195 KIF7Q2M1P5 1343 aa21.6■■□□□ 1.05
COMMD4-217ENST00000567195 PANK3Q9H999 370 aa21.6■■□□□ 1.05
COMMD4-217ENST00000567195 CGNL1Q0VF96 1302 aa21.58■■□□□ 1.05
COMMD4-217ENST00000567195 A0A0G2JS52 829 aa21.58■■□□□ 1.05
COMMD4-217ENST00000567195 MYT1Q01538 1121 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms