RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 DDX54Q8TDD1 881 aaKnown RBP7.39□□□□□ -1.23
CNOT1-211ENST00000567188 DIP2CQ9Y2E4 1556 aa7.39□□□□□ -1.23
CNOT1-211ENST00000567188 WASHC2AQ641Q2 1341 aa7.39□□□□□ -1.23
CNOT1-211ENST00000567188 KIDINS220Q9ULH0 1771 aa7.39□□□□□ -1.23
CNOT1-211ENST00000567188 GPRASP1Q5JY77 1395 aa7.39□□□□□ -1.23
CNOT1-211ENST00000567188 NPATQ14207 1427 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 TPM3P06753 285 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 USP8P40818 1118 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 NME9Q86XW9 330 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 NLRP2Q9NX02 1062 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 ELL2O00472 640 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-211ENST00000567188 CGNL1Q0VF96 1302 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 HSP90AB1P08238 724 aaKnown RBP7.38□□□□□ -1.23
CNOT1-211ENST00000567188 C8orf37Q96NL8 207 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 CHRNA2Q15822 529 aa7.38□□□□□ -1.23
CNOT1-211ENST00000567188 FTSJ3Q8IY81 847 aaKnown RBP7.38□□□□□ -1.23
CNOT1-211ENST00000567188 C11orf95C9JLR9 678 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-211ENST00000567188 C1orf141Q5JVX7 400 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 KRT28Q7Z3Y7 464 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 SLC52A1Q9NWF4 448 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 KIF3AQ9Y496 699 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 MBD5Q9P267 1494 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 PLEKHH1Q9ULM0 1364 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 APBB1O00213 710 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 NSD3Q9BZ95 1437 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 FOXO3O43524 673 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 PHF14O94880 888 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 EIF2S2P20042 333 aaKnown RBP7.37□□□□□ -1.23
CNOT1-211ENST00000567188 BRD2P25440 801 aaKnown RBP7.37□□□□□ -1.23
CNOT1-211ENST00000567188 PDCL2Q8N4E4 241 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 PPIP5K1Q6PFW1 1433 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 PIK3C2BO00750 1634 aa7.37□□□□□ -1.23
CNOT1-211ENST00000567188 CALD1Q05682 793 aaKnown RBP7.36□□□□□ -1.23
CNOT1-211ENST00000567188 TOM1L2Q6ZVM7 507 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 ABCC3O15438 1527 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 CCDC7Q96M83 1385 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 LTKP29376 864 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 DIAPH3Q9NSV4 1193 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 RICTORQ6R327 1708 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 FAM177BA6PVY3 158 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 CLGNO14967 610 aa7.36□□□□□ -1.23
CNOT1-211ENST00000567188 ADGRL2O95490 1459 aa7.35□□□□□ -1.23
CNOT1-211ENST00000567188 IQGAP3Q86VI3 1631 aa7.35□□□□□ -1.23
CNOT1-211ENST00000567188 PLXNC1O60486 1568 aa7.35□□□□□ -1.23
CNOT1-211ENST00000567188 TET3O43151 1660 aa7.35□□□□□ -1.23
CNOT1-211ENST00000567188 IRX3P78415 501 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-211ENST00000567188 PPP1R1BQ9UD71 204 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-211ENST00000567188 INO80Q9ULG1 1556 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-211ENST00000567188 CHMP3Q9Y3E7 222 aa7.35□□□□□ -1.23
CNOT1-211ENST00000567188 PRDM15P57071 1507 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-211ENST00000567188 MSH6P52701 1360 aa7.35□□□□□ -1.23
CNOT1-211ENST00000567188 B4GALNT3Q6L9W6 998 aa7.34□□□□□ -1.23
CNOT1-211ENST00000567188 EIF2AK4Q9P2K8 1649 aaKnown RBP7.34□□□□□ -1.23
CNOT1-211ENST00000567188 BCL2L13Q9BXK5 485 aa7.34□□□□□ -1.23
CNOT1-211ENST00000567188 RBM42Q9BTD8 480 aaKnown RBP7.34□□□□□ -1.23
CNOT1-211ENST00000567188 PREX1Q8TCU6 1659 aa7.34□□□□□ -1.23
CNOT1-211ENST00000567188 ZNF335Q9H4Z2 1342 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-211ENST00000567188 ARGLU1Q9NWB6 273 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-211ENST00000567188 MIS18AQ9NYP9 233 aa7.34□□□□□ -1.23
CNOT1-211ENST00000567188 ACSBG1Q96GR2 724 aa7.34□□□□□ -1.23
CNOT1-211ENST00000567188 DNAJC2Q99543 621 aaKnown RBP7.34□□□□□ -1.23
CNOT1-211ENST00000567188 NEFHP12036 1026 aa7.34□□□□□ -1.24
CNOT1-211ENST00000567188 SLC4A10Q6U841 1118 aa7.34□□□□□ -1.24
CNOT1-211ENST00000567188 RBM28Q9NW13 759 aaKnown RBP7.34□□□□□ -1.24
CNOT1-211ENST00000567188 ERVK-7P63135 1459 aa7.34□□□□□ -1.24
CNOT1-211ENST00000567188 GLI2P10070 1586 aa7.34□□□□□ -1.24
CNOT1-211ENST00000567188 RPGRIP1LQ68CZ1 1315 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 KCNA6P17658 529 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 FRMPD1Q5SYB0 1578 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 BBXQ8WY36 941 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-211ENST00000567188 ARHGEF40Q8TER5 1519 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 QRICH2Q9H0J4 1663 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 MYO5BQ9ULV0 1848 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 SSR1P43307 286 aaKnown RBP7.33□□□□□ -1.24
CNOT1-211ENST00000567188 CCDC39Q9UFE4 941 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 DIAPH1O60610 1272 aaKnown RBP7.33□□□□□ -1.24
CNOT1-211ENST00000567188 WASLO00401 505 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-211ENST00000567188 MYBBP1AQ9BQG0 1328 aaKnown RBP7.33□□□□□ -1.24
CNOT1-211ENST00000567188 CNTLNQ9NXG0 1405 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 PLIN1O60240 522 aa7.33□□□□□ -1.24
CNOT1-211ENST00000567188 UNC13BO14795 1591 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
CNOT1-211ENST00000567188 CAVIN1Q6NZI2 390 aaKnown RBP7.32□□□□□ -1.24
CNOT1-211ENST00000567188 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 ACEP12821 1306 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 EFCAB6Q5THR3 1501 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 CALCOCO1Q9P1Z2 691 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 CCDC184Q52MB2 194 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 IPO8O15397 1037 aaKnown RBP7.32□□□□□ -1.24
CNOT1-211ENST00000567188 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
CNOT1-211ENST00000567188 AIMP1Q12904 312 aaKnown RBP7.32□□□□□ -1.24
CNOT1-211ENST00000567188 STAC3Q96MF2 364 aa7.32□□□□□ -1.24
CNOT1-211ENST00000567188 CCDC173Q0VFZ6 552 aa7.31□□□□□ -1.24
CNOT1-211ENST00000567188 DEF6Q9H4E7 631 aa7.31□□□□□ -1.24
CNOT1-211ENST00000567188 KDM4FA0A1W2PPD8 638 aa7.31□□□□□ -1.24
CNOT1-211ENST00000567188 MCCP23508 829 aa7.31□□□□□ -1.24
CNOT1-211ENST00000567188 KDM5AP29375 1690 aaKnown RBP7.31□□□□□ -1.24
CNOT1-211ENST00000567188 KDM5CP41229 1560 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms