RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
KARS-207ENST00000566560 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
KARS-207ENST00000566560 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
KARS-207ENST00000566560 PHF8Q9UPP1 1060 aa15.97■□□□□ 0.15
KARS-207ENST00000566560 POLR3GLQ9BT43 218 aa15.96■□□□□ 0.15
KARS-207ENST00000566560 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
KARS-207ENST00000566560 NRKQ7Z2Y5 1582 aa15.95■□□□□ 0.14
KARS-207ENST00000566560 KIF7Q2M1P5 1343 aa15.94■□□□□ 0.14
KARS-207ENST00000566560 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
KARS-207ENST00000566560 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
KARS-207ENST00000566560 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
KARS-207ENST00000566560 CCDC7Q96M83 1385 aa15.94■□□□□ 0.14
KARS-207ENST00000566560 PXDNQ92626 1479 aa15.94■□□□□ 0.14
KARS-207ENST00000566560 TRPM3Q9HCF6 1732 aaPredicted RBP15.94■□□□□ 0.14
KARS-207ENST00000566560 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
KARS-207ENST00000566560 C11orf95C9JLR9 678 aaPredicted RBP15.93■□□□□ 0.14
KARS-207ENST00000566560 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
KARS-207ENST00000566560 CABP1Q9NZU7 370 aa15.93■□□□□ 0.14
KARS-207ENST00000566560 CD163L1Q9NR16 1453 aa15.92■□□□□ 0.14
KARS-207ENST00000566560 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
KARS-207ENST00000566560 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
KARS-207ENST00000566560 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
KARS-207ENST00000566560 FOXO3O43524 673 aa15.91■□□□□ 0.14
KARS-207ENST00000566560 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
KARS-207ENST00000566560 USP6P35125 1406 aa15.91■□□□□ 0.14
KARS-207ENST00000566560 ACEP12821 1306 aa15.91■□□□□ 0.14
KARS-207ENST00000566560 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
KARS-207ENST00000566560 ANKRD36BQ8N2N9 1353 aa15.9■□□□□ 0.14
KARS-207ENST00000566560 CPSF1Q10570 1443 aaKnown RBP15.9■□□□□ 0.14
KARS-207ENST00000566560 XPCQ01831 940 aaPredicted RBP15.89■□□□□ 0.13
KARS-207ENST00000566560 SLC12A5Q9H2X9 1139 aa15.89■□□□□ 0.13
KARS-207ENST00000566560 ALS2Q96Q42 1657 aa15.89■□□□□ 0.13
KARS-207ENST00000566560 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
KARS-207ENST00000566560 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
KARS-207ENST00000566560 KTN1Q86UP2 1357 aaKnown RBP15.87■□□□□ 0.13
KARS-207ENST00000566560 TNS3Q68CZ2 1445 aa15.87■□□□□ 0.13
KARS-207ENST00000566560 PSME1Q06323 249 aa15.87■□□□□ 0.13
KARS-207ENST00000566560 HDGFL2Q7Z4V5 671 aaPredicted RBP15.87■□□□□ 0.13
KARS-207ENST00000566560 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
KARS-207ENST00000566560 KIF20BQ96Q89 1820 aa15.87■□□□□ 0.13
KARS-207ENST00000566560 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
KARS-207ENST00000566560 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
KARS-207ENST00000566560 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
KARS-207ENST00000566560 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
KARS-207ENST00000566560 HSPA1LP34931 641 aa15.85■□□□□ 0.13
KARS-207ENST00000566560 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
KARS-207ENST00000566560 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
KARS-207ENST00000566560 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
KARS-207ENST00000566560 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
KARS-207ENST00000566560 ABCA3Q99758 1704 aa15.84■□□□□ 0.13
KARS-207ENST00000566560 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
KARS-207ENST00000566560 MED1Q15648 1581 aaPredicted RBP15.83■□□□□ 0.13
KARS-207ENST00000566560 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.13
KARS-207ENST00000566560 USP54Q70EL1 1684 aa15.83■□□□□ 0.12
KARS-207ENST00000566560 ZNF316A6NFI3 1004 aaPredicted RBP15.82■□□□□ 0.12
KARS-207ENST00000566560 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
KARS-207ENST00000566560 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
KARS-207ENST00000566560 CRYBG1Q9Y4K1 1723 aa15.82■□□□□ 0.12
KARS-207ENST00000566560 SPATA31A3Q5VYP0 1347 aa15.81■□□□□ 0.12
KARS-207ENST00000566560 PHRF1Q9P1Y6 1649 aaKnown RBP15.81■□□□□ 0.12
KARS-207ENST00000566560 MARF1Q9Y4F3 1742 aaKnown RBP15.81■□□□□ 0.12
KARS-207ENST00000566560 ANKRD26Q9UPS8 1709 aa15.8■□□□□ 0.12
KARS-207ENST00000566560 PNPLA6Q8IY17 1366 aa15.8■□□□□ 0.12
KARS-207ENST00000566560 JCADQ9P266 1359 aa15.8■□□□□ 0.12
KARS-207ENST00000566560 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
KARS-207ENST00000566560 TTC21AQ8NDW8 1320 aa15.8■□□□□ 0.12
KARS-207ENST00000566560 LRRC59Q96AG4 307 aaKnown RBP15.8■□□□□ 0.12
KARS-207ENST00000566560 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
KARS-207ENST00000566560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.79■□□□□ 0.12
KARS-207ENST00000566560 PANK3Q9H999 370 aa15.79■□□□□ 0.12
KARS-207ENST00000566560 CARD14Q9BXL6 1004 aa15.77■□□□□ 0.12
KARS-207ENST00000566560 ABTB2Q8N961 1025 aa15.76■□□□□ 0.11
KARS-207ENST00000566560 OVOS2A0A0J9YW53 1432 aa15.76■□□□□ 0.11
KARS-207ENST00000566560 OVOS2Q6IE36 1432 aa15.76■□□□□ 0.11
KARS-207ENST00000566560 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
KARS-207ENST00000566560 SLIT3O75094 1523 aa15.75■□□□□ 0.11
KARS-207ENST00000566560 NME9Q86XW9 330 aa15.75■□□□□ 0.11
KARS-207ENST00000566560 NUTM2GQ5VZR2 741 aa15.74■□□□□ 0.11
KARS-207ENST00000566560 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
KARS-207ENST00000566560 KNSTRNQ9Y448 316 aa15.74■□□□□ 0.11
KARS-207ENST00000566560 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
KARS-207ENST00000566560 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
KARS-207ENST00000566560 NSD2O96028 1365 aa15.73■□□□□ 0.11
KARS-207ENST00000566560 USP19O94966 1318 aa15.72■□□□□ 0.11
KARS-207ENST00000566560 NLRP6P59044 892 aa15.72■□□□□ 0.11
KARS-207ENST00000566560 DDX10Q13206 875 aaKnown RBP15.72■□□□□ 0.11
KARS-207ENST00000566560 LRP6O75581 1613 aa15.72■□□□□ 0.11
KARS-207ENST00000566560 SPATA31A6Q5VVP1 1343 aa15.71■□□□□ 0.11
KARS-207ENST00000566560 NLRP13Q86W25 1043 aa15.71■□□□□ 0.11
KARS-207ENST00000566560 NFAT5O94916 1531 aa15.7■□□□□ 0.1
KARS-207ENST00000566560 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
KARS-207ENST00000566560 GGNBP2Q9H3C7 697 aa15.7■□□□□ 0.1
KARS-207ENST00000566560 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
KARS-207ENST00000566560 LTN1O94822 1766 aa15.7■□□□□ 0.1
KARS-207ENST00000566560 FYB1O15117 783 aa15.69■□□□□ 0.1
KARS-207ENST00000566560 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
KARS-207ENST00000566560 CABLES1Q8TDN4 633 aa15.69■□□□□ 0.1
KARS-207ENST00000566560 COG3Q96JB2 828 aa15.69■□□□□ 0.1
KARS-207ENST00000566560 NPC1L1Q9UHC9 1359 aa15.68■□□□□ 0.1
KARS-207ENST00000566560 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms