RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
SF3B3-207ENST00000566095 SLAIN2Q9P270 581 aa13.24□□□□□ -0.29
SF3B3-207ENST00000566095 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
SF3B3-207ENST00000566095 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
SF3B3-207ENST00000566095 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
SF3B3-207ENST00000566095 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
SF3B3-207ENST00000566095 TOM1O60784 492 aa13.23□□□□□ -0.29
SF3B3-207ENST00000566095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.29
SF3B3-207ENST00000566095 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
SF3B3-207ENST00000566095 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-207ENST00000566095 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
SF3B3-207ENST00000566095 NRKQ7Z2Y5 1582 aa13.2□□□□□ -0.3
SF3B3-207ENST00000566095 FYB1O15117 783 aa13.2□□□□□ -0.3
SF3B3-207ENST00000566095 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-207ENST00000566095 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-207ENST00000566095 SBNO1A3KN83 1393 aa13.2□□□□□ -0.3
SF3B3-207ENST00000566095 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
SF3B3-207ENST00000566095 GGNBP2Q9H3C7 697 aa13.19□□□□□ -0.3
SF3B3-207ENST00000566095 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
SF3B3-207ENST00000566095 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
SF3B3-207ENST00000566095 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
SF3B3-207ENST00000566095 FOXO3O43524 673 aa13.18□□□□□ -0.3
SF3B3-207ENST00000566095 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
SF3B3-207ENST00000566095 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
SF3B3-207ENST00000566095 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
SF3B3-207ENST00000566095 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
SF3B3-207ENST00000566095 BRINP3Q76B58 766 aa13.17□□□□□ -0.3
SF3B3-207ENST00000566095 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
SF3B3-207ENST00000566095 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
SF3B3-207ENST00000566095 NLRP6P59044 892 aa13.16□□□□□ -0.3
SF3B3-207ENST00000566095 NME9Q86XW9 330 aa13.16□□□□□ -0.3
SF3B3-207ENST00000566095 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
SF3B3-207ENST00000566095 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
SF3B3-207ENST00000566095 USP54Q70EL1 1684 aa13.15□□□□□ -0.31
SF3B3-207ENST00000566095 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
SF3B3-207ENST00000566095 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
SF3B3-207ENST00000566095 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
SF3B3-207ENST00000566095 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
SF3B3-207ENST00000566095 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
SF3B3-207ENST00000566095 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
SF3B3-207ENST00000566095 SOCS7O14512 581 aa13.12□□□□□ -0.31
SF3B3-207ENST00000566095 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-207ENST00000566095 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-207ENST00000566095 TRPM3Q9HCF6 1732 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-207ENST00000566095 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
SF3B3-207ENST00000566095 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
SF3B3-207ENST00000566095 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
SF3B3-207ENST00000566095 LRRC59Q96AG4 307 aaKnown RBP13.11□□□□□ -0.31
SF3B3-207ENST00000566095 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
SF3B3-207ENST00000566095 PIK3C2AO00443 1686 aa13.11□□□□□ -0.31
SF3B3-207ENST00000566095 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
SF3B3-207ENST00000566095 PXDNQ92626 1479 aa13.1□□□□□ -0.31
SF3B3-207ENST00000566095 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
SF3B3-207ENST00000566095 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-207ENST00000566095 MTHFSP49914 203 aa13.1□□□□□ -0.31
SF3B3-207ENST00000566095 CDK12Q9NYV4 1490 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-207ENST00000566095 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
SF3B3-207ENST00000566095 ROBO1Q9Y6N7 1651 aa13.09□□□□□ -0.31
SF3B3-207ENST00000566095 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
SF3B3-207ENST00000566095 NEFMP07197 916 aa13.08□□□□□ -0.32
SF3B3-207ENST00000566095 AMPHP49418 695 aa13.08□□□□□ -0.32
SF3B3-207ENST00000566095 HAP1P54257 671 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-207ENST00000566095 XPCQ01831 940 aaPredicted RBP13.08□□□□□ -0.32
SF3B3-207ENST00000566095 ALS2Q96Q42 1657 aa13.08□□□□□ -0.32
SF3B3-207ENST00000566095 USP19O94966 1318 aa13.08□□□□□ -0.32
SF3B3-207ENST00000566095 FLT4P35916 1363 aa13.07□□□□□ -0.32
SF3B3-207ENST00000566095 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-207ENST00000566095 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
SF3B3-207ENST00000566095 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
SF3B3-207ENST00000566095 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
SF3B3-207ENST00000566095 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
SF3B3-207ENST00000566095 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
SF3B3-207ENST00000566095 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
SF3B3-207ENST00000566095 SLIT3O75094 1523 aa13.06□□□□□ -0.32
SF3B3-207ENST00000566095 ABCC6O95255 1503 aa13.05□□□□□ -0.32
SF3B3-207ENST00000566095 GCP02774 474 aa13.05□□□□□ -0.32
SF3B3-207ENST00000566095 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
SF3B3-207ENST00000566095 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
SF3B3-207ENST00000566095 PNPLA6Q8IY17 1366 aa13.05□□□□□ -0.32
SF3B3-207ENST00000566095 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
SF3B3-207ENST00000566095 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
SF3B3-207ENST00000566095 PHLPP1O60346 1717 aa13.03□□□□□ -0.32
SF3B3-207ENST00000566095 SOX12O15370 315 aa13.03□□□□□ -0.32
SF3B3-207ENST00000566095 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
SF3B3-207ENST00000566095 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
SF3B3-207ENST00000566095 RRS1Q15050 365 aaKnown RBP13.02□□□□□ -0.33
SF3B3-207ENST00000566095 DDX17Q92841 729 aaKnown RBP13.02□□□□□ -0.33
SF3B3-207ENST00000566095 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.33
SF3B3-207ENST00000566095 NFAT5O94916 1531 aa13.02□□□□□ -0.33
SF3B3-207ENST00000566095 PHRF1Q9P1Y6 1649 aaKnown RBP13.02□□□□□ -0.33
SF3B3-207ENST00000566095 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
SF3B3-207ENST00000566095 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
SF3B3-207ENST00000566095 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
SF3B3-207ENST00000566095 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
SF3B3-207ENST00000566095 IP6K1Q92551 441 aa13.01□□□□□ -0.33
SF3B3-207ENST00000566095 CPDO75976 1380 aa13.01□□□□□ -0.33
SF3B3-207ENST00000566095 HOXC9P31274 260 aa13□□□□□ -0.33
SF3B3-207ENST00000566095 CCDC184Q52MB2 194 aa13□□□□□ -0.33
SF3B3-207ENST00000566095 YTHDC1Q96MU7 727 aaKnown RBP13□□□□□ -0.33
SF3B3-207ENST00000566095 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms