RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 MTMR7Q9Y216 660 aa3.12□□□□□ -1.91
SUB1P4-201ENST00000566062 PALM3A6NDB9 673 aaPredicted RBP3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 GOLGA8CPA6NN73 597 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 LCE2BO14633 110 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 ATP6V1AP38606 617 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 RBM25P49756 843 aaKnown RBP3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 KMT5BQ4FZB7 885 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 CFAP70Q5T0N1 1121 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 IFFO2Q5TF58 517 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 SLF2Q8IX21 1173 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 ANKK1Q8NFD2 765 aa3.11□□□□□ -1.91
SUB1P4-201ENST00000566062 SOWAHBA6NEL2 793 aa3.1□□□□□ -1.91
SUB1P4-201ENST00000566062 PER1O15534 1290 aaPredicted RBP3.1□□□□□ -1.91
SUB1P4-201ENST00000566062 TBC1D9Q6ZT07 1266 aa3.1□□□□□ -1.91
SUB1P4-201ENST00000566062 ZFRQ96KR1 1074 aaKnown RBP3.1□□□□□ -1.91
SUB1P4-201ENST00000566062 ALG2Q9H553 416 aa3.1□□□□□ -1.91
SUB1P4-201ENST00000566062 VRTNQ9H8Y1 702 aa3.1□□□□□ -1.91
SUB1P4-201ENST00000566062 SOCS7O14512 581 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 RGS20O76081 388 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 CTHP32929 405 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 EIF4G2P78344 907 aaKnown RBP eCLIP3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 TRAF7Q6Q0C0 670 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 THSD4Q6ZMP0 1018 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 WNT2BQ93097 391 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 ZNF428Q96B54 188 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 LRCH3Q96II8 777 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 PRR14Q9BWN1 585 aa3.09□□□□□ -1.91
SUB1P4-201ENST00000566062 PATL2C9JE40 543 aaKnown RBP3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 BRD1O95696 1058 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 SKIP12755 728 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 KCNA1Q09470 495 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 Q3C1V9 767 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 RGS22Q8NE09 1264 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 TSR3Q9UJK0 312 aaKnown RBP3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 SLC27A5Q9Y2P5 690 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 IVNS1ABPQ9Y6Y0 642 aa3.08□□□□□ -1.92
SUB1P4-201ENST00000566062 GPR37L1O60883 481 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 SOX11P35716 441 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 PPP4CP60510 307 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 SRPK2P78362 688 aaKnown RBP3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 NR1H3Q13133 447 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 MORN1Q5T089 497 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 RETREG3Q86VR2 466 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 DEPDC4Q8N2C3 294 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 UCN2Q96RP3 112 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 USTQ9Y2C2 406 aa3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 MAFBQ9Y5Q3 323 aaPredicted RBP3.07□□□□□ -1.92
SUB1P4-201ENST00000566062 ZBBXA8MT70 800 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 PIK3CDO00329 1044 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 ACTN4O43707 911 aaKnown RBP3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 ATP9BO43861 1147 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 ATG7O95352 703 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 ITGBL1O95965 494 aaPredicted RBP3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 FBXO45P0C2W1 286 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 CCDC27Q2M243 656 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 BLOC1S3Q6QNY0 202 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 LYPD8Q6UX82 237 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 RNF19BQ6ZMZ0 732 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 KCTD12Q96CX2 325 aaKnown RBP3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 USB1Q9BQ65 265 aaKnown RBP3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 PCDHB9Q9Y5E1 797 aa3.06□□□□□ -1.92
SUB1P4-201ENST00000566062 E9PSI1 815 aa3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 FMNL1O95466 1100 aaPredicted RBP3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 SLFNL1Q499Z3 407 aa3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 LARP1Q6PKG0 1096 aaKnown RBP3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 CCDC24Q8N4L8 307 aa3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 MAP10Q9P2G4 905 aa3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 FKBPLQ9UIM3 349 aa3.05□□□□□ -1.92
SUB1P4-201ENST00000566062 TMEM88BA6NKF7 163 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 NR1I2O75469 434 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 RASA1P20936 1047 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 KANK4Q5T7N3 995 aaPredicted RBP3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 TMEM164Q5U3C3 297 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 BRICD5Q6PL45 260 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 RNF135Q8IUD6 432 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 SCUBE3Q8IX30 993 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 STK32AQ8WU08 396 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 MKRN1Q9UHC7 482 aaKnown RBP3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 NOVA2Q9UNW9 492 aaKnown RBP3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 HPS5Q9UPZ3 1129 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 PCDHB3Q9Y5E6 796 aa3.04□□□□□ -1.92
SUB1P4-201ENST00000566062 USP17L3A6NCW0 530 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 USP17L4A6NCW7 530 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 USP17L5A8MUK1 530 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 JUNDP17535 347 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 BCAMP50895 628 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 COPS2P61201 443 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 PTK2Q05397 1052 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 DESI1Q6ICB0 168 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 B4GALNT3Q6L9W6 998 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 USP17L2Q6R6M4 530 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 USP17L1Q7RTZ2 530 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 FAM174AQ8TBP5 190 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 CCER1Q8TC90 406 aaPredicted RBP3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 FAM200AQ8TCP9 573 aa3.03□□□□□ -1.92
SUB1P4-201ENST00000566062 WBP1LQ9NX94 342 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms